Works by Kinkar, Liina

Results: 17

First record of a tandem-repeat region within the mitochondrial genome of Clonorchis sinensis using a long-read sequencing approach.

Published in:

PLoS Neglected Tropical Diseases, 2020, v. 14, n. 8, p. 1, doi. 10.1371/journal.pntd.0008552

By:

Kinkar, Liina;
Young, Neil D.;
Sohn, Woon-Mok;
Stroehlein, Andreas J.;
Korhonen, Pasi K.;
Gasser, Robin B.

Publication type:

Article

Marked mitochondrial genetic variation in individuals and populations of the carcinogenic liver fluke Clonorchis sinensis.

Published in:

PLoS Neglected Tropical Diseases, 2020, v. 14, n. 8, p. 1, doi. 10.1371/journal.pntd.0008480

By:

Kinkar, Liina;
Korhonen, Pasi K.;
Wang, Daxi;
Zhu, Xing-Quan;
Chelomina, Galina N.;
Wang, Tao;
Hall, Ross S.;
Koehler, Anson V.;
Harliwong, Ivon;
Yang, Bicheng;
Fink, J. Lynn;
Young, Neil D.;
Gasser, Robin B.

Publication type:

Article

First report of highly pathogenic Echinococcus granulosus genotype G1 in dogs in a European urban environment.

Published in:

Parasites & Vectors, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13071-015-0796-3

By:

Laurimaa, Leidi;
Davison, John;
Süld, Karmen;
Plumer, Liivi;
Oja, Ragne;
Moks, Epp;
Keis, Marju;
Hindrikson, Maris;
Kinkar, Liina;
Laurimäe, Teivi;
Abner, Jaana;
Remm, Jaanus;
Anijalg, Peeter;
Saarma, Urmas

Publication type:

Article

Cystic echinococcosis in Iceland: a brief history and genetic analysis of a 46-year-old Echinococcus isolate collected prior to the eradication of this zoonotic disease.

Published in:

Parasitology, 2023, v. 150, n. 7, p. 638, doi. 10.1017/S0031182023000355

By:

Saarma, Urmas;
Skirnisson, Karl;
Björnsdottir, Thorunn Soley;
Laurimäe, Teivi;
Kinkar, Liina

Publication type:

Article

Exploring the genetic diversity of genotypes G8 and G10 of the Echinococcus canadensis cluster in Europe based on complete mitochondrial genomes (13 550–13 552 bp).

Published in:

Parasitology, 2023, v. 150, n. 7, p. 631, doi. 10.1017/S0031182023000331

By:

Laurimäe, Teivi;
Kinkar, Liina;
Moks, Epp;
Bagrade, Guna;
Saarma, Urmas

Publication type:

Article

Cystic echinococcosis in Iceland: a brief history and genetic analysis of a 46-year-old Echinococcus isolate collected prior to the eradication of this zoonotic disease.

Published in:

Parasitology, 2023, v. 150, n. 7, p. 638, doi. 10.1017/S0031182023000355

By:

Saarma, Urmas;
Skirnisson, Karl;
Björnsdottir, Thorunn Soley;
Laurimäe, Teivi;
Kinkar, Liina

Publication type:

Article

Exploring the genetic diversity of genotypes G8 and G10 of the Echinococcus canadensis cluster in Europe based on complete mitochondrial genomes (13 550–13 552 bp).

Published in:

Parasitology, 2023, v. 150, n. 7, p. 631, doi. 10.1017/S0031182023000331

By:

Laurimäe, Teivi;
Kinkar, Liina;
Moks, Epp;
Bagrade, Guna;
Saarma, Urmas

Publication type:

Article

Molecular phylogeny based on six nuclear genes suggests that Echinococcus granulosus sensu lato genotypes G6/G7 and G8/G10 can be regarded as two distinct species.

Published in:

Parasitology, 2018, v. 145, n. 14, p. 1929, doi. 10.1017/S0031182018000719

By:

Laurimäe, Teivi;
Kinkar, Liina;
Moks, Epp;
Saarma, Urmas;
Mirhendi, Hossein;
Ponce-Gordo, Francisco;
Soriano, Silvia V.;
Varcasia, Antonio;
Rostami-Nejad, Mohammad;
Andresiuk, Vanessa;
Romig, Thomas;
Omer, Rihab A.;
Casulli, Adriano;
Umhang, Gérald;
Bagrade, Guna;
Irshadullah, Malik;
Sharbatkhori, Mitra

Publication type:

Article

Genetic diversity and phylogeography of the elusive, but epidemiologically important Echinococcus granulosus sensu stricto genotype G3.

Published in:

Parasitology, 2018, v. 145, n. 12, p. 1613, doi. 10.1017/S0031182018000549

By:

Kinkar, Liina;
Laurimäe, Teivi;
Balkaya, Ibrahim;
Casulli, Adriano;
Zait, Houria;
Irshadullah, Malik;
Sharbatkhori, Mitra;
Mirhendi, Hossein;
Rostami-Nejad, Mohammad;
Ponce-Gordo, Francisco;
Rehbein, Steffen;
Kia, Eshrat Beigom;
Simsek, Sami;
Šnábel, Viliam;
Umhang, Gérald;
Varcasia, Antonio;
Saarma, Urmas

Publication type:

Article

High-resolution phylogeography of zoonotic tapeworm Echinococcus granulosus sensu stricto genotype G1 with an emphasis on its distribution in Turkey, Italy and Spain.

Published in:

Parasitology, 2016, v. 143, n. 13, p. 1790, doi. 10.1017/S0031182016001530

By:

KINKAR, LIINA;
LAURIMÄE, TEIVI;
SIMSEK, SAMI;
BALKAYA, IBRAHIM;
CASULLI, ADRIANO;
MANFREDI, MARIA TERESA;
PONCE-GORDO, FRANCISCO;
VARCASIA, ANTONIO;
LAVIKAINEN, ANTTI;
GONZÁLEZ, LUIS MIGUEL;
REHBEIN, STEFFEN;
VAN DER GIESSEN, JOKE;
SPRONG, HEIN;
SAARMA, URMAS

Publication type:

Article

Long-read sequencing reveals a 4.4 kb tandem repeat region in the mitogenome of Echinococcus granulosus (sensu stricto) genotype G1.

Published in:

Parasites & Vectors, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13071-019-3492-x

By:

Kinkar, Liina;
Korhonen, Pasi K.;
Cai, Huimin;
Gauci, Charles G.;
Lightowlers, Marshall W.;
Saarma, Urmas;
Jenkins, David J.;
Li, Jiandong;
Li, Junhua;
Young, Neil D.;
Gasser, Robin B.

Publication type:

Article

Genome‐wide exploration reveals distinctive northern and southern variants of Clonorchis sinensis in the Far East.

Published in:

Molecular Ecology Resources, 2023, v. 23, n. 4, p. 833, doi. 10.1111/1755-0998.13760

By:

Kinkar, Liina;
Korhonen, Pasi K.;
Saarma, Urmas;
Wang, Tao;
Zhu, Xing‐Quan;
Harliwong, Ivon;
Yang, Bicheng;
Fink, J. Lynn;
Wang, Daxi;
Chang, Bill C. H.;
Chelomina, Galina N.;
Koehler, Anson V.;
Young, Neil D.;
Gasser, Robin B.

Publication type:

Article

"Escalibur"—A practical pipeline for the de novo analysis of nucleotide variation in nonmodel eukaryotes.

Published in:

Molecular Ecology Resources, 2022, v. 22, n. 5, p. 2120, doi. 10.1111/1755-0998.13600

By:

Korhonen, Pasi K.;
Shaban, Babak;
Faux, Noel G.;
Kinkar, Liina;
Chang, Bill C. H.;
Wang, Daxi;
Yang, Bicheng;
Young, Neil D.;
Gasser, Robin B.

Publication type:

Article

First detection of zoonotic tapeworm Echinococcus granulosus sensu lato genotype G7 in continental Italy.

Published in:

Parasitology Research, 2019, v. 118, n. 7, p. 2193, doi. 10.1007/s00436-019-06346-2

By:

Laurimäe, Teivi;
Kinkar, Liina;
Varcasia, Antonio;
Dessì, Giorgia;
Sgroi, Giovanni;
D'Alessio, Nicola;
Veneziano, Vincenzo;
Saarma, Urmas

Publication type:

Article

Nanopore Sequencing Resolves Elusive Long Tandem-Repeat Regions in Mitochondrial Genomes.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 4, p. 1811, doi. 10.3390/ijms22041811

By:

Kinkar, Liina;
Gasser, Robin B.;
Webster, Bonnie L.;
Rollinson, David;
Littlewood, D. Timothy J.;
Chang, Bill C.H.;
Stroehlein, Andreas J.;
Korhonen, Pasi K.;
Young, Neil D.;
Plohl, Miroslav

Publication type:

Article

Noninvasive Detection of Echinococcus multilocularis Tapeworm in Urban Area, Estonia.

Published in:

Emerging Infectious Diseases, 2015, v. 21, n. 1, p. 163, doi. 10.3201/eid2101.140136

By:

Laurimaa, Leidi;
Davison, John;
Plumer, Liivi;
Süld, Karmen;
Oja, Ragne;
Moks, Epp;
Keis, Marju;
Hindrikson, Maris;
Kinkar, Liina;
Laurimäe, Teivi;
Abner, Jaana;
Remm, Jaanus;
Anijalg, Peeter;
Saarma, Urmas

Publication type:

Article

Chromosome-scale Echinococcus granulosus (genotype G1) genome reveals the Eg95 gene family and conservation of the EG95-vaccine molecule.

Published in:

Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03125-1

By:

Korhonen, Pasi K.;
Kinkar, Liina;
Young, Neil D.;
Cai, Huimin;
Lightowlers, Marshall W.;
Gauci, Charles;
Jabbar, Abdul;
Chang, Bill C. H.;
Wang, Tao;
Hofmann, Andreas;
Koehler, Anson V.;
Li, Junhua;
Li, Jiandong;
Wang, Daxi;
Yin, Jiefang;
Yang, Huanming;
Jenkins, David J.;
Saarma, Urmas;
Laurimäe, Teivi;
Rostami-Nejad, Mohammad

Publication type:

Article