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Traumatic brain injury induces macrophage subsets in the brain.
Published in:
European Journal of Immunology, 2013, v. 43, n. 8, p. 2010, doi. 10.1002/eji.201243084
By:
- Hsieh, Christine L.;
- Kim, Charles C.;
- Ryba, Bryan E.;
- Niemi, Erene C.;
- Bando, Jennifer K.;
- Locksley, Richard M.;
- Liu, Jialing;
- Nakamura, Mary C.;
- Seaman, William E.
Publication type:
Article
Delineation of Diverse Macrophage Activation Programs in Response to Intracellular Parasites and Cytokines.
Published in:
PLoS Neglected Tropical Diseases, 2010, v. 4, n. 3, p. 1, doi. 10.1371/journal.pntd.0000648
By:
- Zhang, Shuyi;
- Kim, Charles C.;
- Batra, Sajeev;
- McKerrow, James H.;
- Loke, P'ng
Publication type:
Article
Delineation of Diverse Macrophage Activation Programs in Response to Intracellular Parasites and Cytokines.
Published in:
PLoS Neglected Tropical Diseases, 2010, v. 4, n. 3, p. 1, doi. 10.1371/journal.pntd.0000648
By:
- Shuyi Zhang;
- Kim, Charles C.;
- Batra, Sajeev;
- McKerrow, James H.;
- Png Loke
Publication type:
Article
VersaCount: customizable manual tally software for cell counting.
Published in:
2010
By:
- Kim, Charles C.;
- DeRisi, Joseph L.
Publication type:
Product Review
Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq.
Published in:
BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-016-1457-z
By:
- Williams, Claire R.;
- Baccarella, Alyssa;
- Parrish, Jay Z.;
- Kim, Charles C.
Publication type:
Article
Trimming of sequence reads alters RNA-Seq gene expression estimates.
Published in:
BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-0956-2
By:
- Williams, Claire R.;
- Baccarella, Alyssa;
- Parrish, Jay Z.;
- Kim, Charles C.
Publication type:
Article
Post-surgical discharge opioid prescribing, use and handling after introduction of a stewardship program.
Published in:
Anaesthesia & Intensive Care, 2023, v. 51, n. 4, p. 239, doi. 10.1177/0310057X231160800
By:
- Allen, Megan L;
- Silva, Anurika P De;
- Braat, Sabine;
- Jones, Karin;
- Chia, Angela;
- Hucker, Timothy R;
- Brooks, Sally L;
- Hogg, Malcolm;
- Lee, Chuan-Whei;
- Williams, Daryl L;
- Kim, Charles C
Publication type:
Article
Post-discharge opioid use and handling in surgical patients: A multicentre prospective cohort study.
Published in:
2020
By:
- Allen, Megan L;
- Kim, Charles C;
- Braat, Sabine;
- Jones, Karin;
- Winter, Noam;
- Hucker, Timothy R;
- Chia, Angela;
- Lang, Coran;
- Brooks, Sally L;
- Williams, Daryl L
Publication type:
journal article
Post-surgical opioid stewardship programs across Australia and New Zealand: Current situation and future directions.
Published in:
2019
By:
- Allen, Megan L.;
- Leslie, Kate;
- Parker, Anna V.;
- Kim, Charles C.;
- Brooks, Sally L.;
- Braat, Sabine;
- Schug, Stephan A.;
- Story, David A.
Publication type:
journal article
Dissection of multiple sclerosis genetics identifies B and CD4+ T cells as driver cell subsets.
Published in:
Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02694-y
By:
- Guo, Michael H.;
- Sama, Prashanth;
- LaBarre, Brenna A.;
- Lokhande, Hrishikesh;
- Balibalos, John;
- Chu, Ci;
- Du, Xiaomi;
- Kheradpour, Pouya;
- Kim, Charles C.;
- Oniskey, Taylor;
- Snyder, Thomas;
- Soghoian, Damien Z.;
- Weiner, Howard L.;
- Chitnis, Tanuja;
- Patsopoulos, Nikolaos A.
Publication type:
Article
Splenic Red Pulp Macrophages Produce Type I Interferons as Early Sentinels of Malaria Infection but Are Dispensable for Control.
Published in:
PLoS ONE, 2012, v. 7, n. 10, p. 1, doi. 10.1371/journal.pone.0048126
By:
- Kim, Charles C.;
- Nelson, Christopher S.;
- Wilson, Emily B.;
- Baidong Hou;
- DeFranco, Anthony L.;
- DeRisi, Joseph L.
Publication type:
Article
Significance analysis of lexical bias in microarray data.
Published in:
BMC Bioinformatics, 2003, v. 4, p. 12, doi. 10.1186/1471-2105-4-12
By:
- Kim, Charles C.;
- Falkow, Stanley
Publication type:
Article
A20 upregulation during treated HIV disease is associated with intestinal epithelial cell recovery and function.
Published in:
PLoS Pathogens, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.ppat.1006806
By:
- Chitre, Avantika S.;
- Kattah, Michael G.;
- Rosli, Yenny Y.;
- Pao, Montha;
- Deswal, Monika;
- Deeks, Steven G.;
- Hunt, Peter W.;
- Abdel-Mohsen, Mohamed;
- Montaner, Luis J.;
- Kim, Charles C.;
- Ma, Averil;
- Somsouk, Ma;
- McCune, Joseph M.
Publication type:
Article
Genome-Wide Screen for Salmonella Genes Required for Long-Term Systemic Infection of the Mouse.
Published in:
PLoS Pathogens, 2006, v. 2, n. 2, p. 0087, doi. 10.1371/journal.ppat.0020011
By:
- Trevor D., Lawley;
- Kaman, Chan;
- Lucinda J., Thompson;
- Charles C., Kim;
- Gregory R., Govoni;
- Denise M., Monack
Publication type:
Article
Neutrophils prime a long-lived effector macrophage phenotype that mediates accelerated helminth expulsion.
Published in:
Nature Immunology, 2014, v. 15, n. 10, p. 938, doi. 10.1038/ni.2984
By:
- Chen, Fei;
- Wu, Wenhui;
- Millman, Ariel;
- Craft, Joshua F;
- Chen, Eunice;
- Patel, Nirav;
- Boucher, Jean L;
- Urban, Joseph F;
- Kim, Charles C;
- Gause, William C
Publication type:
Article
Molecular definition of the identity and activation of natural killer cells.
Published in:
Nature Immunology, 2012, v. 13, n. 10, p. 1000, doi. 10.1038/ni.2395
By:
- Bezman, Natalie A;
- Kim, Charles C;
- Sun, Joseph C;
- Min-Oo, Gundula;
- Hendricks, Deborah W;
- Kamimura, Yosuke;
- Best, J Adam;
- Goldrath, Ananda W;
- Lanier, Lewis L;
- Gautier, Emmanuel L;
- Jakubzick, Claudia;
- Randolph, Gwendalyn J;
- Best, Adam J;
- Knell, Jamie;
- Goldrath, Ananda;
- Miller, Jennifer;
- Brown, Brian;
- Merad, Miriam;
- Jojic, Vladimir;
- Koller, Daphne
Publication type:
Article
FCRL5 Delineates Functionally Impaired Memory B Cells Associated with Plasmodium falciparum Exposure.
Published in:
PLoS Pathogens, 2015, v. 11, n. 5, p. 1, doi. 10.1371/journal.ppat.1004894
By:
- Sullivan, Richard T.;
- Kim, Charles C.;
- Fontana, Mary F.;
- Feeney, Margaret E.;
- Jagannathan, Prasanna;
- Boyle, Michelle J.;
- Drakeley, Chris J.;
- Ssewanyana, Isaac;
- Nankya, Felistas;
- Mayanja-Kizza, Harriet;
- Dorsey, Grant;
- Greenhouse, Bryan
Publication type:
Article
A Novel Model of Asymptomatic Plasmodium Parasitemia That Recapitulates Elements of the Human Immune Response to Chronic Infection.
Published in:
PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0162132
By:
- Fontana, Mary F.;
- Baccarella, Alyssa;
- Craft, Joshua F.;
- Boyle, Michelle J.;
- McIntyre, Tara I.;
- Wood, Matthew D.;
- Thorn, Kurt S.;
- Anidi, Chioma;
- Bayat, Aqieda;
- Chung, Me Ree;
- Hamburger, Rebecca;
- Kim, Chris Y.;
- Pearman, Emily;
- Pham, Jennifer;
- Tang, Jia J.;
- Boon, Louis;
- Kamya, Moses R.;
- Dorsey, Grant;
- Feeney, Margaret E.;
- Kim, Charles C.
Publication type:
Article
Correction: Cathelicidin Insufficiency in Patients with Fatal Leptospirosis.
Published in:
2017
By:
- Lindow, Janet C.;
- Wunder, Elsio A.;
- Popper, Stephen J.;
- Min, Jin-na;
- Mannam, Praveen;
- Srivastava, Anup;
- Yao, Yi;
- Hacker, Kathryn P.;
- Raddassi, Khadir;
- Lee, Patty J.;
- Montgomery, Ruth R.;
- Shaw, Albert C.;
- Hagan, Jose E.;
- Araújo, Guilherme C.;
- Nery, Nivison;
- Relman, David A.;
- Kim, Charles C.;
- Reis, Mitermayer G.;
- Ko, Albert I.
Publication type:
Correction Notice
Correction: Macrophage Colony Stimulating Factor Derived from CD4<sup>+</sup> T Cells Contributes to Control of a Blood-Borne Infection.
Published in:
2017
By:
- Fontana, Mary F.;
- de Melo, Gabrielly L.;
- Anidi, Chioma;
- Hamburger, Rebecca;
- Kim, Chris Y.;
- Lee, So Youn;
- Pham, Jennifer;
- Kim, Charles C.
Publication type:
Correction Notice
Macrophage Colony Stimulating Factor Derived from CD4<sup>+</sup> T Cells Contributes to Control of a Blood-Borne Infection.
Published in:
PLoS Pathogens, 2016, v. 12, n. 12, p. 1, doi. 10.1371/journal.ppat.1006046
By:
- Fontana, Mary F.;
- de Melo, Gabrielly L.;
- Anidi, Chioma;
- Hamburger, Rebecca;
- Kim, Chris Y.;
- Lee, So Youn;
- Pham, Jennifer;
- Kim, Charles C.
Publication type:
Article
Cathelicidin Insufficiency in Patients with Fatal Leptospirosis.
Published in:
PLoS Pathogens, 2016, v. 12, n. 11, p. 1, doi. 10.1371/journal.ppat.1005943
By:
- Lindow, Janet C.;
- JrWunder, Elsio A.;
- Popper, Stephen J.;
- Min, Jin-na;
- Mannam, Praveen;
- Srivastava, Anup;
- Yao, Yi;
- Hacker, Kathryn P.;
- Raddassi, Khadir;
- Lee, Patty J.;
- Montgomery, Ruth R.;
- Shaw, Albert C.;
- Hagan, Jose E.;
- Araújo, Guilherme C.;
- JrNery, Nivison;
- Relman, David A.;
- Kim, Charles C.;
- Reis, Mitermayer G.;
- Ko, Albert I.
Publication type:
Article
EAG2 potassium channel with evolutionarily conserved function as a brain tumor target.
Published in:
Nature Neuroscience, 2015, v. 18, n. 9, p. 1236, doi. 10.1038/nn.4088
By:
- Huang, Xi;
- He, Ye;
- Dubuc, Adrian M;
- Hashizume, Rintaro;
- Zhang, Wei;
- Reimand, Jüri;
- Yang, Huanghe;
- Wang, Tongfei A;
- Stehbens, Samantha J;
- Younger, Susan;
- Barshow, Suzanne;
- Zhu, Sijun;
- Cooper, Michael K;
- Peacock, John;
- Ramaswamy, Vijay;
- Garzia, Livia;
- Wu, Xiaochong;
- Remke, Marc;
- Forester, Craig M;
- Kim, Charles C
Publication type:
Article
Gene Expression Patterns of Dengue Virus-Infected Children from Nicaragua Reveal a Distinct Signature of Increased Metabolism.
Published in:
PLoS Neglected Tropical Diseases, 2010, v. 4, n. 6, p. 1, doi. 10.1371/journal.pntd.0000710
By:
- Loke, P'ng;
- Hammond, Samantha N.;
- Leung, Jacqueline M.;
- Kim, Charles C.;
- Batra, Sajeev;
- Rocha, Crisanta;
- Balmaseda, Angel;
- Harris, Eva
Publication type:
Article
Gene Expression Patterns of Dengue Virus-Infected Children from Nicaragua Reveal a Distinct Signature of Increased Metabolism.
Published in:
PLoS Neglected Tropical Diseases, 2010, v. 4, n. 6, p. 1, doi. 10.1371/journal.pntd.0000710
By:
- Loke, P'ng;
- Hammond, Samantha N.;
- Leung, Jacqueline M.;
- Kim, Charles C.;
- Batra, Sajeev;
- Rocha, Crisanta;
- Balmaseda, Angel;
- Harris, Eva
Publication type:
Article
Brain trauma elicits non-canonical macrophage activation states.
Published in:
2016
By:
- Kim, Charles C.;
- Nakamura, Mary C.;
- Hsieh, Christine L.
Publication type:
journal article
Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance.
Published in:
BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2445-2
By:
- Baccarella, Alyssa;
- Kim, Charles C.;
- Parrish, Jay Z.;
- Williams, Claire R.
Publication type:
Article
Loss of Toll-like receptor 7 alters cytokine production and protects against experimental cerebral malaria.
Published in:
Malaria Journal, 2014, v. 13, n. 1, p. 354, doi. 10.1186/1475-2875-13-354
By:
- Baccarella, Alyssa;
- Huang, Brian W.;
- Fontana, Mary F.;
- Kim, Charles C.
Publication type:
Article
Improved methods for magnetic purification of malaria parasites and haemozoin.
Published in:
Malaria Journal, 2010, v. 9, p. 1, doi. 10.1186/1475-2875-9-17
By:
- Kim, Charles C.;
- Wilson, Emily B.;
- DeRisi, Joseph L.
Publication type:
Article
TrpA1 activation in peripheral sensory neurons underlies the ionic basis of pain hypersensitivity in response to vinca alkaloids.
Published in:
PLoS ONE, 2017, v. 12, n. 10, p. 1, doi. 10.1371/journal.pone.0186888
By:
- Boiko, Nina;
- Medrano, Geraldo;
- Montano, Elizabeth;
- Jiang, Nan;
- Williams, Claire R.;
- Madungwe, Ngonidzashe B.;
- Bopassa, Jean C.;
- Kim, Charles C.;
- Parrish, Jay Z.;
- Hargreaves, Kenneth M.;
- Stockand, James D.;
- Eaton, Benjamin A.
Publication type:
Article

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