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Pathway Evolution Through a Bottlenecking‐Debottlenecking Strategy and Machine Learning‐Aided Flux Balancing.
- Published in:
- Advanced Science, 2024, v. 11, n. 14, p. 1, doi. 10.1002/advs.202306935
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- Article
teemi: An open-source literate programming approach for iterative design-build-test-learn cycles in bioengineering.
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- PLoS Computational Biology, 2024, v. 20, n. 3, p. 1, doi. 10.1371/journal.pcbi.1011929
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- Article
Edible mycelium bioengineered for enhanced nutritional value and sensory appeal using a modular synthetic biology toolkit.
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- Nature Communications, 2024, p. 1, doi. 10.1038/s41467-024-46314-8
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- Article
Foldy: An open-source web application for interactive protein structure analysis.
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- PLoS Computational Biology, 2024, v. 20, n. 2, p. 1, doi. 10.1371/journal.pcbi.1011171
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- Article
A General and Convenient Peptide Self‐Assembling Mechanism for Developing Supramolecular Versatile Nanomaterials Based on The Biosynthetic Hybrid Amyloid‐Resilin Protein.
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- Advanced Materials, 2024, v. 36, n. 4, p. 1, doi. 10.1002/adma.202304364
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- Article
Carbene chemistry for unnatural biosynthesis.
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- SCIENCE CHINA Life Sciences, 2024, v. 67, n. 1, p. 204, doi. 10.1007/s11427-023-2470-5
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- Article
UniKP: a unified framework for the prediction of enzyme kinetic parameters.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-44113-1
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- Article
BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale.
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- PLoS Computational Biology, 2023, v. 19, n. 11, p. 1, doi. 10.1371/journal.pcbi.1011111
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- Article
Deciphering triterpenoid saponin biosynthesis by leveraging transcriptome response to methyl jasmonate elicitation in Saponaria vaccaria.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-42877-0
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- Article
Biosensor Guided Polyketide Synthases Engineering for Optimization of Domain Exchange Boundaries.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40464-x
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- Article
Discovery of the Azaserine Biosynthetic Pathway Uncovers a Biological Route for α‐Diazoester Production.
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- Angewandte Chemie, 2023, v. 135, n. 28, p. 1, doi. 10.1002/ange.202304646
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- Article
Discovery of the Azaserine Biosynthetic Pathway Uncovers a Biological Route for α‐Diazoester Production.
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- Angewandte Chemie International Edition, 2023, v. 62, n. 28, p. 1, doi. 10.1002/anie.202304646
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- Article
Medicinal terpenoid UDP-glycosyltransferases in plants: recent advances and research strategies.
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- Journal of Experimental Botany, 2023, v. 74, n. 5, p. 1343, doi. 10.1093/jxb/erac505
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- Article
ClusterCAD 2.0: an updated computational platform for chimeric type I polyketide synthase and nonribosomal peptide synthetase design.
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- Nucleic Acids Research, 2023, v. 51, n. D1, p. D532, doi. 10.1093/nar/gkac1075
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- Article
Engineering Pseudomonas putida KT2440 for chain length tailored free fatty acid and oleochemical production.
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- Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-04336-2
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- Article
Permeability‐Engineered Compartmentalization Enables In Vitro Reconstitution of Sustained Synthetic Biology Systems (Adv. Sci. 34/2022).
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- Advanced Science, 2022, v. 9, n. 34, p. 1, doi. 10.1002/advs.202270220
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- Article
Permeability‐Engineered Compartmentalization Enables In Vitro Reconstitution of Sustained Synthetic Biology Systems.
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- Advanced Science, 2022, v. 9, n. 34, p. 1, doi. 10.1002/advs.202203652
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- Publication type:
- Article
Advanced one-pot deconstruction and valorization of lignocellulosic biomass into triacetic acid lactone using Rhodosporidium toruloides.
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- Microbial Cell Factories, 2022, v. 21, n. 1, p. 1, doi. 10.1186/s12934-022-01977-0
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- Article
A FAIR-compliant parts catalogue for genome engineering and expression control in Saccharomyces cerevisiae.
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- Synthetic & Systems Biotechnology, 2022, v. 7, n. 2, p. 657, doi. 10.1016/j.synbio.2022.02.001
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Sustainable manufacturing with synthetic biology.
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- Nature Biotechnology, 2022, v. 40, n. 3, p. 304, doi. 10.1038/s41587-022-01248-8
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- Article
Integrating continuous hypermutation with high‐throughput screening for optimization of cis,cis‐muconic acid production in yeast.
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- Microbial Biotechnology, 2021, v. 14, n. 6, p. 2617, doi. 10.1111/1751-7915.13774
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- Article
A synthetic promoter system for well-controlled protein expression with different carbon sources in Saccharomyces cerevisiae.
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- Microbial Cell Factories, 2021, v. 20, n. 1, p. 1, doi. 10.1186/s12934-021-01691-3
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- Article
A synthetic RNA-mediated evolution system in yeast.
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- Nucleic Acids Research, 2021, v. 49, n. 15, p. e88, doi. 10.1093/nar/gkab472
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- Article
The Design-Build-Test-Learn cycle for metabolic engineering of Streptomycetes.
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- Essays in Biochemistry, 2021, v. 65, n. 2, p. 261, doi. 10.1042/EBC20200132
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- Article
Optimizing the biosynthesis of oxygenated and acetylated Taxol precursors in Saccharomyces cerevisiae using advanced bioprocessing strategies.
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- Biotechnology & Bioengineering, 2021, v. 118, n. 1, p. 279, doi. 10.1002/bit.27569
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- Article
Enhanced production of taxadiene in Saccharomyces cerevisiae.
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- Microbial Cell Factories, 2020, v. 19, n. 1, p. 1, doi. 10.1186/s12934-020-01458-2
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- Article
Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-19171-4
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- Article
Combining mechanistic and machine learning models for predictive engineering and optimization of tryptophan metabolism.
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- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-17910-1
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- Article
Response of Pseudomonas putida to Complex, Aromatic‐Rich Fractions from Biomass.
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- ChemSusChem, 2020, v. 13, n. 17, p. 4455, doi. 10.1002/cssc.202000268
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- Article
Investigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation.
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- Microbial Cell Factories, 2020, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12934-020-01423-z
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- Article
Promoter Architecture and Promoter Engineering in Saccharomyces cerevisiae.
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- Metabolites (2218-1989), 2020, v. 10, n. 8, p. 320, doi. 10.3390/metabo10080320
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- Article
Insight into the Mechanism of Phenylacetate Decarboxylase (PhdB), a Toluene‐Producing Glycyl Radical Enzyme.
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- ChemBioChem, 2020, v. 21, n. 5, p. 663, doi. 10.1002/cbic.201900560
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- Article
Evolution-guided engineering of small-molecule biosensors.
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- Nucleic Acids Research, 2020, v. 48, n. 1, p. e3, doi. 10.1093/nar/gkz954
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- Article
Enhancing Terminal Deoxynucleotidyl Transferase Activity on Substrates with 3′ Terminal Structures for Enzymatic De Novo DNA Synthesis.
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- Genes, 2020, v. 11, n. 1, p. 102, doi. 10.3390/genes11010102
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- Article
Correction to: Production efficiency of the bacterial non-ribosomal peptide indigoidine relies on the respiratory metabolic state in S. cerevisiae.
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- 2019
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- Correction Notice
Distinct functional roles for hopanoid composition in the chemical tolerance of Zymomonas mobilis.
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- Molecular Microbiology, 2019, v. 112, n. 5, p. 1564, doi. 10.1111/mmi.14380
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- Article
The Transcriptome and Flux Profiling of Crabtree‐Negative Hydroxy Acid‐Producing Strains of Saccharomyces cerevisiae Reveals Changes in the Central Carbon Metabolism.
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- Biotechnology Journal, 2019, v. 14, n. 9, p. N.PAG, doi. 10.1002/biot.201900013
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- Article
Structural insights into dehydratase substrate selection for the borrelidin and fluvirucin polyketide synthases.
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- Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 8, p. 1225, doi. 10.1007/s10295-019-02189-z
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- Article
A High‐Throughput Mass Spectrometric Enzyme Activity Assay Enabling the Discovery of Cytochrome P450 Biocatalysts.
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- Angewandte Chemie, 2019, v. 131, n. 30, p. 10220, doi. 10.1002/ange.201901782
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- Article
A High‐Throughput Mass Spectrometric Enzyme Activity Assay Enabling the Discovery of Cytochrome P450 Biocatalysts.
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- Angewandte Chemie International Edition, 2019, v. 58, n. 30, p. 10114, doi. 10.1002/anie.201901782
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- Article
Author Correction: Building a global alliance of biofoundries.
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- 2019
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- Publication type:
- Correction Notice
Technical Advances to Accelerate Modular Type I Polyketide Synthase Engineering towards a Retro-biosynthetic Platform.
- Published in:
- Biotechnology & Bioprocess Engineering, 2019, v. 24, n. 3, p. 413, doi. 10.1007/s12257-019-0083-9
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- Article
Building a global alliance of biofoundries.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-10079-2
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- Article
Exploring small-scale chemostats to scale up microbial processes: 3-hydroxypropionic acid production in S. cerevisiae.
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- Microbial Cell Factories, 2019, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12934-019-1101-5
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- Article
Coupling S-adenosylmethionine–dependent methylation to growth: Design and uses.
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- PLoS Biology, 2019, v. 17, n. 3, p. 1, doi. 10.1371/journal.pbio.2007050
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- Article
A rapid methods development workflow for high-throughput quantitative proteomic applications.
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- PLoS ONE, 2019, v. 14, n. 2, p. 1, doi. 10.1371/journal.pone.0211582
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- Article
Production efficiency of the bacterial non-ribosomal peptide indigoidine relies on the respiratory metabolic state in S. cerevisiae.
- Published in:
- Microbial Cell Factories, 2018, v. 17, n. 1, p. N.PAG, doi. 10.1186/s12934-018-1045-1
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- Publication type:
- Article
Polyketide synthases as a platform for chemical product design.
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- AIChE Journal, 2018, v. 64, n. 12, p. 4201, doi. 10.1002/aic.16351
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- Article
Modular 5′-UTR hexamers for context-independent tuning of protein expression in eukaryotes.
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- Nucleic Acids Research, 2018, v. 46, n. 21, p. e127, doi. 10.1093/nar/gky734
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- Article
Short-chain ketone production by engineered polyketide synthases in Streptomyces albus.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07040-0
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- Publication type:
- Article