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Identifying, understanding, and correcting technical artifacts on the sex chromosomes in next-generation sequencing data.
Published in:
GigaScience, 2019, v. 8, n. 7, p. N.PAG, doi. 10.1093/gigascience/giz074
By:
- Webster, Timothy H;
- Couse, Madeline;
- Grande, Bruno M;
- Karlins, Eric;
- Phung, Tanya N;
- Richmond, Phillip A;
- Whitford, Whitney;
- Wilson, Melissa A
Publication type:
Article
Blood DNA methylation and breast cancer risk: a meta-analysis of four prospective cohort studies.
Published in:
2019
By:
- Bodelon, Clara;
- Ambatipudi, Srikant;
- Dugué, Pierre-Antoine;
- Johansson, Annelie;
- Sampson, Joshua N.;
- Hicks, Belynda;
- Karlins, Eric;
- Hutchinson, Amy;
- Cuenin, Cyrille;
- Chajès, Veronique;
- Southey, Melissa C.;
- Romieu, Isabelle;
- Giles, Graham G.;
- English, Dallas;
- Polidoro, Silvia;
- Assumma, Manuela;
- Baglietto, Laura;
- Vineis, Paolo;
- Severi, Gianluca;
- Herceg, Zdenko
Publication type:
journal article
Chromosomal microarray analysis supplements exome sequencing to diagnose children with suspected inborn errors of immunity.
Published in:
Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1172004
By:
- Beers, Breanna J.;
- Similuk, Morgan N.;
- Ghosh, Rajarshi;
- Seifert, Bryce A.;
- Jamal, Leila;
- Kamen, Michael;
- Setzer, Michael R.;
- Jodarski, Colleen;
- Duncan, Rylee;
- Hunt, Devin;
- Mixer, Madison;
- Wenjia Cao;
- Weimin Bi;
- Veltri, Daniel;
- Karlins, Eric;
- Lingwen Zhang;
- Zhiwen Li;
- Oler, Andrew J.;
- Jevtich, Kathleen;
- Yunting Yu
Publication type:
Article
No evidence of BRCA2 mutations in chromosome 13q-linked Utah high-risk prostate cancer pedigrees.
Published in:
BMC Research Notes, 2009, v. 2, p. 1, doi. 10.1186/1756-0500-2-94
By:
- Allen-Brady, Kristina;
- Farnham, James M.;
- Camp, Nicola J.;
- Karlins, Eric;
- Ostrander, Elaine A.;
- Cannon-Albright, Lisa A.
Publication type:
Article
Low-frequency variation near common germline susceptibility loci are associated with risk of Ewing sarcoma.
Published in:
PLoS ONE, 2020, v. 15, n. 9, p. 1, doi. 10.1371/journal.pone.0237792
By:
- Lin, Shu-Hong;
- Sampson, Joshua N.;
- Grünewald, Thomas G. P.;
- Surdez, Didier;
- Reynaud, Stephanie;
- Mirabeau, Olivier;
- Karlins, Eric;
- Rubio, Rebeca Alba;
- Zaidi, Sakina;
- Grossetête-Lalami, Sandrine;
- Ballet, Stelly;
- Lapouble, Eve;
- Laurence, Valérie;
- Michon, Jean;
- Pierron, Gaelle;
- Kovar, Heinrich;
- Kontny, Udo;
- González-Neira, Anna;
- Alonso, Javier;
- Patino-Garcia, Ana
Publication type:
Article
Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome.
Published in:
Nature Communications, 2016, v. 7, n. 6, p. 11843, doi. 10.1038/ncomms11843
By:
- Machiela, Mitchell J.;
- Zhou, Weiyin;
- Karlins, Eric;
- Sampson, Joshua N.;
- Freedman, Neal D.;
- Yang, Qi;
- Hicks, Belynda;
- Dagnall, Casey;
- Hautman, Christopher;
- Jacobs, Kevin B.;
- Abnet, Christian C.;
- Aldrich, Melinda C.;
- Amos, Christopher;
- Amundadottir, Laufey T.;
- Arslan, Alan A.;
- Beane-Freeman, Laura E.;
- Berndt, Sonja I.;
- Black, Amanda;
- Blot, William J.;
- Bock, Cathryn H.
Publication type:
Article
Successful use of whole genome amplified DNA from multiple source types for high-density Illumina SNP microarrays.
Published in:
BMC Genomics, 2018, v. 19, p. 1, doi. 10.1186/s12864-018-4572-6
By:
- Dagnall, Casey L.;
- Morton, Lindsay M.;
- Hicks, Belynda D.;
- Li, Shengchao;
- Zhou, Weiyin;
- Karlins, Eric;
- Teshome, Kedest;
- Chowdhury, Salma;
- Lashley, Kerrie S.;
- Sampson, Joshua N.;
- Robison, Leslie L.;
- Armstrong, Gregory T.;
- Bhatia, Smita;
- Radloff, Gretchen A.;
- Davies, Stella M.;
- Tucker, Margaret A.;
- Yeager, Meredith;
- Chanock, Stephen J.
Publication type:
Article
Genome‐wide association study identifies the <italic>GLDC</italic>/<italic>IL33</italic> locus associated with survival of osteosarcoma patients.
Published in:
International Journal of Cancer, 2018, v. 142, n. 8, p. 1594, doi. 10.1002/ijc.31195
By:
- Koster, Roelof;
- Panagiotou, Orestis A.;
- Wheeler, William A.;
- Karlins, Eric;
- Gastier‐Foster, Julie M.;
- Caminada de Toledo, Silvia Regina;
- Petrilli, Antonio S.;
- Flanagan, Adrienne M.;
- Tirabosco, Roberto;
- Andrulis, Irene L.;
- Wunder, Jay S.;
- Gokgoz, Nalan;
- Patiño‐Garcia, Ana;
- Lecanda, Fernando;
- Serra, Massimo;
- Hattinger, Claudia;
- Picci, Piero;
- Scotlandi, Katia;
- Thomas, David M.;
- Ballinger, Mandy L.
Publication type:
Article
Genome-wide association study identifies multiple new loci associated with Ewing sarcoma susceptibility.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-05537-2
By:
- Machiela, Mitchell J.;
- Grünewald, Thomas G. P.;
- Surdez, Didier;
- Reynaud, Stephanie;
- Mirabeau, Olivier;
- Karlins, Eric;
- Rubio, Rebeca Alba;
- Zaidi, Sakina;
- Grossetete-Lalami, Sandrine;
- Ballet, Stelly;
- Lapouble, Eve;
- Laurence, Valérie;
- Michon, Jean;
- Pierron, Gaelle;
- Kovar, Heinrich;
- Gaspar, Nathalie;
- Kontny, Udo;
- González-Neira, Anna;
- Picci, Piero;
- Alonso, Javier
Publication type:
Article
A Copy Number Variant at the KITLG Locus Likely Confers Risk for Canine Squamous Cell Carcinoma of the Digit.
Published in:
PLoS Genetics, 2013, v. 9, n. 3, p. 1, doi. 10.1371/journal.pgen.1003409
By:
- Karyadi, Danielle M.;
- Karlins, Eric;
- Decker, Brennan;
- vonHoldt, Bridgett M.;
- Carpintero-Ramirez, Gretchen;
- Parker, Heidi G.;
- Wayne, Robert K.;
- Ostrander, Elaine A.
Publication type:
Article
Higher-than-expected population prevalence of potentially pathogenic germline TP53 variants in individuals unselected for cancer history.
Published in:
Human Mutation, 2017, v. 38, n. 12, p. 1723, doi. 10.1002/humu.23320
By:
- Andrade, Kelvin César;
- Mirabello, Lisa;
- Stewart, Douglas R.;
- Karlins, Eric;
- Koster, Roelof;
- Wang, Mingyi;
- Gapstur, Susan M.;
- Gaudet, Mia M.;
- Freedman, Neal D.;
- Landi, Maria Teresa;
- Lemonnier, Nathanaël;
- Hainaut, Pierre;
- Savage, Sharon A.;
- Achatz, Maria Isabel
Publication type:
Article
Fine scale mapping of the breast cancer 16q12 locus.
Published in:
Human Molecular Genetics, 2010, v. 19, n. 12, p. 2507, doi. 10.1093/hmg/ddq122
By:
- Udler, Miriam S.;
- Ahmed, Shahana;
- Healey, Catherine S.;
- Meyer, Kerstin;
- Struewing, Jeffrey;
- Maranian, Melanie;
- Kwon, Erika M.;
- Zhang, Jinghui;
- Tyrer, Jonathan;
- Karlins, Eric;
- Platte, Radka;
- Kalmyrzaev, Bolot;
- Dicks, Ed;
- Field, Helen;
- Maia, Ana-Teresa;
- Prathalingam, Radhika;
- Teschendorff, Andrew;
- McArthur, Stewart;
- Doody, David R.;
- Luben, Robert
Publication type:
Article
FGFR2 variants and breast cancer risk: fine-scale mapping using African American studies and analysis of chromatin conformation.
Published in:
Human Molecular Genetics, 2009, v. 18, n. 9, p. 1692, doi. 10.1093/hmg/ddp078
By:
- Udler, Miriam S.;
- Meyer, Kerstin B.;
- Pooley, Karen A.;
- Karlins, Eric;
- Struewing, Jeffery P.;
- Zhang, Jinghui;
- Doody, David R.;
- MacArthur, Stewart;
- Tyrer, Jonathan;
- Pharoah, Paul D.;
- Luben, Robert;
- Bernstein, Leslie;
- Kolonel, Laurence N.;
- Henderson, Brian E.;
- Le Marchand, Loic;
- Ursin, Giske;
- Press, Michael F.;
- Brennan, Paul;
- Sangrajrang, Suleeporn;
- Gaborieau, Valerie
Publication type:
Article
Genome-Wide Association Study to Identify Susceptibility Loci That Modify Radiation-Related Risk for Breast Cancer After Childhood Cancer.
Published in:
2017
By:
- Morton, Lindsay M.;
- Sampson, Joshua N.;
- Armstrong, Gregory T.;
- Ting-Huei Chen;
- Hudson, Melissa M.;
- Karlins, Eric;
- Dagnall, Casey L.;
- Li, Shengchao Alfred;
- Wilson, Carmen L.;
- Srivastava, Deo Kumar;
- Wei Liu;
- Kang, Guolian;
- Oeffinger, Kevin C.;
- Henderson, Tara O.;
- Moskowitz, Chaya S.;
- Gibson, Todd M.;
- Merino, Diana M.;
- Bhatia, Smita;
- Chanock, Stephen J.;
- Tucker, Margaret A.
Publication type:
journal article

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