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Metabolic engineering of p‐hydroxybenzoate in poplar lignin.
Published in:
Plant Biotechnology Journal, 2023, v. 21, n. 1, p. 176, doi. 10.1111/pbi.13935
By:
- Mottiar, Yaseen;
- Karlen, Steven D.;
- Goacher, Robyn E.;
- Ralph, John;
- Mansfield, Shawn D.
Publication type:
Article
Stacking AsFMT overexpression with BdPMT loss of function enhances monolignol ferulate production in Brachypodium distachyon.
Published in:
Plant Biotechnology Journal, 2021, v. 19, n. 9, p. 1878, doi. 10.1111/pbi.13606
By:
- Smith, Rebecca A.;
- Cass, Cynthia L.;
- Petrik, Deborah L.;
- Padmakshan, Dharshana;
- Ralph, John;
- Sedbrook, John C.;
- Karlen, Steven D.
Publication type:
Article
Effects of PHENYLALANINE AMMONIA LYASE (PAL) knockdown on cell wall composition, biomass digestibility, and biotic and abiotic stress responses in Brachypodium.
Published in:
Journal of Experimental Botany, 2015, v. 66, n. 14, p. 4317, doi. 10.1093/jxb/erv269
By:
- Cass, Cynthia L.;
- Peraldi, Antoine;
- Dowd, Patrick F.;
- Mottiar, Yaseen;
- Santoro, Nicholas;
- Karlen, Steven D.;
- Bukhman, Yury V.;
- Foster, Cliff E.;
- Thrower, Nick;
- Bruno, Laura C.;
- Moskvin, Oleg V.;
- Johnson, Eric T.;
- Willhoit, Megan E.;
- Phutane, Megha;
- Ralph, John;
- Mansfield, Shawn D.;
- Nicholson, Paul;
- Sedbrook, John C.
Publication type:
Article
Ultrafast entangling gates between nuclear spins using photoexcited triplet states.
Published in:
Nature Physics, 2012, v. 8, n. 8, p. 596, doi. 10.1038/nphys2353
By:
- Filidou, Vasileia;
- Simmons, Stephanie;
- Karlen, Steven D.;
- Giustino, Feliciano;
- Anderson, Harry L.;
- Morton, John J. L.
Publication type:
Article
Diverse lignocellulosic feedstocks can achieve high field‐scale ethanol yields while providing flexibility for the biorefinery and landscape‐level environmental benefits.
Published in:
GCB Bioenergy, 2018, v. 10, n. 11, p. 825, doi. 10.1111/gcbb.12533
By:
- Zhang, Yaoping;
- Oates, Lawrence G.;
- Serate, Jose;
- Xie, Dan;
- Pohlmann, Edward;
- Bukhman, Yury V.;
- Karlen, Steven D.;
- Young, Megan K.;
- Higbee, Alan;
- Eilert, Dustin;
- Sanford, Gregg R.;
- Piotrowski, Jeff S.;
- Cavalier, David;
- Ralph, John;
- Coon, Joshua J.;
- Sato, Trey K.;
- Ong, Rebecca G.
Publication type:
Article
Downregulation of p‐COUMAROYL ESTER 3‐HYDROXYLASE in rice leads to altered cell wall structures and improves biomass saccharification.
Published in:
Plant Journal, 2018, v. 95, n. 5, p. 796, doi. 10.1111/tpj.13988
By:
- Takeda, Yuri;
- Tobimatsu, Yuki;
- Karlen, Steven D.;
- Koshiba, Taichi;
- Suzuki, Shiro;
- Yamamura, Masaomi;
- Murakami, Shinya;
- Mukai, Mai;
- Hattori, Takefumi;
- Osakabe, Keishi;
- Ralph, John;
- Sakamoto, Masahiro;
- Umezawa, Toshiaki
Publication type:
Article
Tricin-lignins: occurrence and quantitation of tricin in relation to phylogeny.
Published in:
Plant Journal, 2016, v. 88, n. 6, p. 1046, doi. 10.1111/tpj.13315
By:
- Lan, Wu;
- Rencoret, Jorge;
- Lu, Fachuang;
- Karlen, Steven D.;
- Smith, Bronwen G.;
- Harris, Philip J.;
- Río, José Carlos;
- Ralph, John
Publication type:
Article
p-Coumaroyl- Co A:monolignol transferase ( PMT) acts specifically in the lignin biosynthetic pathway in Brachypodium distachyon.
Published in:
Plant Journal, 2014, v. 77, n. 5, p. 713, doi. 10.1111/tpj.12420
By:
- Petrik, Deborah L.;
- Karlen, Steven D.;
- Cass, Cynthia L.;
- Padmakshan, Dharshana;
- Lu, Fachuang;
- Liu, Sarah;
- Bris, Philippe;
- Antelme, Sébastien;
- Santoro, Nicholas;
- Wilkerson, Curtis G.;
- Sibout, Richard;
- Lapierre, Catherine;
- Ralph, John;
- Sedbrook, John C.
Publication type:
Article
Overexpression of a Sugarcane BAHD Acyltransferase Alters Hydroxycinnamate Content in Maize Cell Wall.
Published in:
Frontiers in Plant Science, 2021, v. 12, p. N.PAG, doi. 10.3389/fpls.2021.626168
By:
- Fanelli, Amanda;
- Rancour, David M.;
- Sullivan, Michael;
- Karlen, Steven D.;
- Ralph, John;
- Riaño-Pachón, Diego Mauricio;
- Vicentini, Renato;
- Silva, Tatiane da Franca;
- Ferraz, André;
- Hatfield, Ronald D.;
- Romanel, Elisson
Publication type:
Article
Suppression of CINNAMOYL-CoA REDUCTASE increases the level of monolignol ferulates incorporated into maize lignins.
Published in:
Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-017-0793-1
By:
- Smith, Rebecca A.;
- Cass, Cynthia L.;
- Mazaheri, Mona;
- Sekhon, Rajandeep S.;
- Heckwolf, Marlies;
- Kaeppler, Heidi;
- de Leon, Natalia;
- Mansfield, Shawn D.;
- Kaeppler, Shawn M.;
- Sedbrook, John C.;
- Karlen, Steven D.;
- Ralph, John
Publication type:
Article
Functional and Evolutionary Integration of a Fungal Gene With a Bacterial Operon.
Published in:
Molecular Biology & Evolution, 2024, v. 41, n. 4, p. 1, doi. 10.1093/molbev/msae045
By:
- Sun, Liang;
- David, Kyle T;
- Wolters, John F;
- Karlen, Steven D;
- Gonçalves, Carla;
- Opulente, Dana A;
- LaBella, Abigail Leavitt;
- Groenewald, Marizeth;
- Zhou, Xiaofan;
- Shen, Xing-Xing;
- Rokas, Antonis;
- Hittinger, Chris Todd
Publication type:
Article
Rapid Biocatalytic Synthesis of Aromatic Acid CoA Thioesters by Using Microbial Aromatic Acid CoA Ligases.
Published in:
ChemBioChem, 2023, v. 24, n. 9, p. 1, doi. 10.1002/cbic.202300001
By:
- Chaudhury, Debayan;
- Torkelson, Ella R.;
- Meyers, Kaya A.;
- Acheson, Justin F.;
- Landucci, Leta;
- Pu, Yucen;
- Sun, Zimou;
- Tonelli, Marco;
- Bingman, Craig A.;
- Smith, Rebecca A.;
- Karlen, Steven D.;
- Mansfield, Shawn D.;
- Ralph, John;
- Fox, Brian G.
Publication type:
Article
Quantification of Native Lignin Structural Features with Gel‐Phase 2D‐HSQC<sub>0</sub> Reveals Lignin Structural Changes During Extraction.
Published in:
Angewandte Chemie, 2024, v. 136, n. 31, p. 1, doi. 10.1002/ange.202404442
By:
- Bourmaud, Claire L.;
- Bertella, Stefania;
- Bosch Rico, Anna;
- Karlen, Steven D.;
- Ralph, John;
- Luterbacher, Jeremy S.
Publication type:
Article
Enhancing monolignol ferulate conjugate levels in poplar lignin via OsFMT1.
Published in:
Biotechnology for Biofuels & Bioproducts, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13068-024-02544-y
By:
- Unda, Faride;
- de Vries, Lisanne;
- Karlen, Steven D.;
- Rainbow, Jordan;
- Zhang, Chengcheng;
- Bartley, Laura E.;
- Kim, Hoon;
- Ralph, John;
- Mansfield, Shawn D.
Publication type:
Article
Quantification of Native Lignin Structural Features with Gel‐Phase 2D‐HSQC<sub>0</sub> Reveals Lignin Structural Changes During Extraction.
Published in:
Angewandte Chemie International Edition, 2024, v. 63, n. 31, p. 1, doi. 10.1002/anie.202404442
By:
- Bourmaud, Claire L.;
- Bertella, Stefania;
- Bosch Rico, Anna;
- Karlen, Steven D.;
- Ralph, John;
- Luterbacher, Jeremy S.
Publication type:
Article
Evolution of p‐coumaroylated lignin in eudicots provides new tools for cell wall engineering.
Published in:
New Phytologist, 2023, v. 237, n. 1, p. 251, doi. 10.1111/nph.18518
By:
- Mottiar, Yaseen;
- Smith, Rebecca A.;
- Karlen, Steven D.;
- Ralph, John;
- Mansfield, Shawn D.
Publication type:
Article
A new approach to zip‐lignin: 3,4‐dihydroxybenzoate is compatible with lignification.
Published in:
New Phytologist, 2022, v. 235, n. 1, p. 234, doi. 10.1111/nph.18136
By:
- Unda, Faride;
- Mottiar, Yaseen;
- Mahon, Elizabeth L.;
- Karlen, Steven D.;
- Kim, Kwang Ho;
- Loqué, Dominique;
- Eudes, Aymerick;
- Ralph, John;
- Mansfield, Shawn D.
Publication type:
Article
p-Coumaroylation of lignin occurs outside of commelinid monocots in the eudicot genus Morus (mulberry).
Published in:
Plant Physiology, 2023, v. 191, n. 2, p. 1, doi. 10.1093/plphys/kiac485
By:
- Hellinger, Jan;
- Hoon Kim;
- Ralph, John;
- Karlen, Steven D.
Publication type:
Article
Identification and characterization of a set of monocot BAHD monolignol transferases.
Published in:
Plant Physiology, 2022, v. 189, n. 1, p. 37, doi. 10.1093/plphys/kiac035
By:
- Smith, Rebecca A.;
- Beebe, Emily T.;
- Bingman, Craig A.;
- Meulen, Kirk Vander;
- Eugene, Alexis;
- Steiner, Alexander J.;
- Karlen, Steven D.;
- Ralph, John;
- Fox, Brian G.
Publication type:
Article
pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar.
Published in:
Plant Physiology, 2022, v. 188, n. 2, p. 1014, doi. 10.1093/plphys/kiab546
By:
- de Vries, Lisanne;
- MacKay, Heather A.;
- Smith, Rebecca A.;
- Mottiar, Yaseen;
- Karlen, Steven D.;
- Unda, Faride;
- Muirragui, Emilia;
- Bingman, Craig;
- Meulen, Kirk Vander;
- Beebe, Emily T.;
- Fox, Brian G.;
- Ralph, John;
- Mansfield, Shawn D.
Publication type:
Article
Commelinid Monocotyledon Lignins Are Acylated by p-Coumarate.
Published in:
Plant Physiology, 2018, v. 177, n. 2, p. 513, doi. 10.1104/pp.18.00298
By:
- Karlen, Steven D.;
- Free, Heather C. A.;
- Padmakshan, Dharshana;
- Smith, Bronwen G.;
- Ralph, John;
- Harris, Philip J.
Publication type:
Article
Open Access Highly Decorated Lignins in Leaf Tissues of the Canary Island Date Palm Phoenix canariensis.
Published in:
Plant Physiology, 2017, v. 175, n. 3, p. 1058, doi. 10.1104/pp.17.01172
By:
- Karlen, Steven D.;
- Smith, Rebecca A.;
- Hoon Kim;
- Padmakshan, Dharshana;
- Bartuce, Allison;
- Mobley, Justin K.;
- Free, Heather C. A.;
- Smith, Bronwen G.;
- Harris, Philip J.;
- Ralph, John
Publication type:
Article
Defining the Diverse Cell Populations Contributing to Lignification in Arabidopsis Stems.
Published in:
Plant Physiology, 2017, v. 174, n. 2, p. 1028, doi. 10.1104/pp.17.00434
By:
- Smith, Rebecca A.;
- Schuetz, Mathias;
- Karlen, Steven D.;
- Bird, David;
- Naohito Tokunaga;
- Yasushi Sato;
- Mansfield, Shawn D.;
- Ralph, John;
- Samuels, A. Lacey
Publication type:
Article
Engineering Monolignol p-Coumarate Conjugates into Poplar and Arabidopsis Lignins.
Published in:
Plant Physiology, 2015, v. 169, n. 4, p. 2992, doi. 10.1104/pp.15.00815
By:
- Smith, Rebecca A.;
- Gonzales-Vigil, Eliana;
- Karlen, Steven D.;
- Park, Ji-Young;
- Fachuang Lu;
- Wilkerson, Curtis G.;
- Samuels, Lacey;
- Ralph, John;
- Mansfield, Shawn D.
Publication type:
Article
Cell Wall Composition and Biomass Recalcitrance Differences Within a Genotypically Diverse Set of Brachypodium distachyon Inbred Lines.
Published in:
Frontiers in Plant Science, 2016, p. 1, doi. 10.3389/fpls.2016.00708
By:
- Cass, Cynthia L.;
- Lavell, Anastasiya A.;
- Santoro, Nicholas;
- Foster, Cliff E.;
- Karlen, Steven D.;
- Smith, Rebecca A.;
- Ralph, John;
- Garvin, David F.;
- Sedbrook, John C.
Publication type:
Article
BdCESA7, BdCESA8, and BdPMT Utility Promoter Constructs for Targeted Expression to Secondary Cell-Wall-Forming Cells of Grasses.
Published in:
Frontiers in Plant Science, 2016, p. 1, doi. 10.3389/fpls.2016.00055
By:
- Petrik, Deborah L.;
- Cass, Cynthia L.;
- Padmakshan, Dharshana;
- Foster, Cliff E.;
- Vogel, John P.;
- Karlen, Steven D.;
- Ralph, John;
- Sedbrook, John C.
Publication type:
Article
Production of Biomass‐Derived p‐Hydroxybenzamide: Synthesis of p‐Aminophenol and Paracetamol.
Published in:
ChemSusChem, 2024, v. 17, n. 8, p. 1, doi. 10.1002/cssc.202400234
By:
- Karlen, Steven D.;
- Timokhin, Vitaliy I.;
- Sener, Canan;
- Mobley, Justin K.;
- Runge, Troy;
- Ralph, John
Publication type:
Article
Cover Feature: Production of Biomass‐Derived p‐Hydroxybenzamide: Synthesis of p‐Aminophenol and Paracetamol (ChemSusChem 8/2024).
Published in:
ChemSusChem, 2024, v. 17, n. 8, p. 1, doi. 10.1002/cssc.202400599
By:
- Karlen, Steven D.;
- Timokhin, Vitaliy I.;
- Sener, Canan;
- Mobley, Justin K.;
- Runge, Troy;
- Ralph, John
Publication type:
Article
Cover Feature: Mechanistic Study of Diaryl Ether Bond Cleavage during Palladium‐Catalyzed Lignin Hydrogenolysis (ChemSusChem 17/2020).
Published in:
ChemSusChem, 2020, v. 13, n. 17, p. 4172, doi. 10.1002/cssc.202001702
By:
- Li, Yanding;
- Karlen, Steven D.;
- Demir, Benginur;
- Kim, Hoon;
- Luterbacher, Jeremy;
- Dumesic, James A.;
- Stahl, Shannon S.;
- Ralph, John
Publication type:
Article
Mechanistic Study of Diaryl Ether Bond Cleavage during Palladium‐Catalyzed Lignin Hydrogenolysis.
Published in:
ChemSusChem, 2020, v. 13, n. 17, p. 4487, doi. 10.1002/cssc.202000753
By:
- Li, Yanding;
- Karlen, Steven D.;
- Demir, Benginur;
- Kim, Hoon;
- Luterbacher, Jeremy;
- Dumesic, James A.;
- Stahl, Shannon S.;
- Ralph, John
Publication type:
Article
Assessing the Viability of Recovery of Hydroxycinnamic Acids from Lignocellulosic Biorefinery Alkaline Pretreatment Waste Streams.
Published in:
ChemSusChem, 2020, v. 13, n. 8, p. 1922, doi. 10.1002/cssc.202000820
By:
- Karlen, Steven D.;
- Fasahati, Peyman;
- Mazaheri, Mona;
- Serate, Jose;
- Smith, Rebecca A.;
- Sirobhushanam, Sirisha;
- Chen, Mingjie;
- Tymokhin, Vitaliy I.;
- Cass, Cynthia L.;
- Liu, Sarah;
- Padmakshan, Dharshana;
- Xie, Dan;
- Zhang, Yaoping;
- McGee, Mick A.;
- Russell, Jason D.;
- Coon, Joshua J.;
- Kaeppler, Heidi F.;
- Leon, Natalia;
- Maravelias, Christos T.;
- Runge, Troy M.
Publication type:
Article
Front Cover: Assessing the Viability of Recovery of Hydroxycinnamic Acids from Lignocellulosic Biorefinery Alkaline Pretreatment Waste Streams (ChemSusChem 8/2020).
Published in:
ChemSusChem, 2020, v. 13, n. 8, p. 1918, doi. 10.1002/cssc.202000821
By:
- Karlen, Steven D.;
- Fasahati, Peyman;
- Mazaheri, Mona;
- Serate, Jose;
- Smith, Rebecca A.;
- Sirobhushanam, Sirisha;
- Chen, Mingjie;
- Tymokhin, Vitaliy I.;
- Cass, Cynthia L.;
- Liu, Sarah;
- Padmakshan, Dharshana;
- Xie, Dan;
- Zhang, Yaoping;
- McGee, Mick A.;
- Russell, Jason D.;
- Coon, Joshua J.;
- Kaeppler, Heidi F.;
- Leon, Natalia;
- Maravelias, Christos T.;
- Runge, Troy M.
Publication type:
Article
Assessing the Viability of Recovery of Hydroxycinnamic Acids from Lignocellulosic Biorefinery Alkaline Pretreatment Waste Streams.
Published in:
ChemSusChem, 2020, v. 13, n. 8, p. 2012, doi. 10.1002/cssc.201903345
By:
- Karlen, Steven D.;
- Fasahati, Peyman;
- Mazaheri, Mona;
- Serate, Jose;
- Smith, Rebecca A.;
- Sirobhushanam, Sirisha;
- Chen, Mingjie;
- Tymokhin, Vitaliy I.;
- Cass, Cynthia L.;
- Liu, Sarah;
- Padmakshan, Dharshana;
- Xie, Dan;
- Zhang, Yaoping;
- McGee, Mick A.;
- Russell, Jason D.;
- Coon, Joshua J.;
- Kaeppler, Heidi F.;
- Leon, Natalia;
- Maravelias, Christos T.;
- Runge, Troy M.
Publication type:
Article
Reductive Cleavage Method for Quantitation of Monolignols and Low‐Abundance Monolignol Conjugates.
Published in:
ChemSusChem, 2018, v. 11, n. 10, p. 1580, doi. 10.1002/cssc.201800958
By:
- Regner, Matt;
- Bartuce, Allison;
- Padmakshan, Dharshana;
- Ralph, John;
- Karlen, Steven D.
Publication type:
Article
Front Cover: Reductive Cleavage Method for Quantitation of Monolignols and Low‐Abundance Monolignol Conjugates (ChemSusChem 10/2018).
Published in:
ChemSusChem, 2018, v. 11, n. 10, p. 1576, doi. 10.1002/cssc.201800957
By:
- Regner, Matt;
- Bartuce, Allison;
- Padmakshan, Dharshana;
- Ralph, John;
- Karlen, Steven D.
Publication type:
Article
Reductive Cleavage Method for Quantitation of Monolignols and Low‐Abundance Monolignol Conjugates.
Published in:
ChemSusChem, 2018, v. 11, n. 10, p. 1600, doi. 10.1002/cssc.201800617
By:
- Regner, Matt;
- Bartuce, Allison;
- Padmakshan, Dharshana;
- Ralph, John;
- Karlen, Steven D.
Publication type:
Article
Chemical Pulping Advantages of Zip-lignin Hybrid Poplar.
Published in:
ChemSusChem, 2017, v. 10, n. 18, p. 3565, doi. 10.1002/cssc.201701317
By:
- Zhou, Shengfei;
- Runge, Troy;
- Karlen, Steven D.;
- Ralph, John;
- Gonzales‐Vigil, Eliana;
- Mansfield, Shawn D.
Publication type:
Article
Variation in energy sorghum hybrid TX08001 biomass composition and lignin chemistry during development under irrigated and non-irrigated field conditions.
Published in:
PLoS ONE, 2018, v. 13, n. 3, p. 1, doi. 10.1371/journal.pone.0195863
By:
- McKinley, Brian A.;
- Olson, Sara N.;
- Ritter, Kimberley B.;
- Herb, Dustin W.;
- Karlen, Steven D.;
- Lu, Fachuang;
- Ralph, John;
- Rooney, William L.;
- Mullet, John E.
Publication type:
Article

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