Works by Karig, David

Results: 13

Synthetic biology: new engineering rules for an emerging discipline.

Published in:

Molecular Systems Biology, 2006, v. 2, n. 1, p. E1, doi. 10.1038/msb4100073

By:

Andrianantoandro, Ernesto;
Basu, Subhayu;
Karig, David K;
Weiss, Ron

Publication type:

Article

Noise in biological circuits.

Published in:

WIREs: Nanomedicine & Nanobiotechnology, 2009, v. 1, n. 2, p. 214, doi. 10.1002/wnan.22

By:

Simpson, Michael L.;
Cox, Chris D.;
Allen, Michael S.;
McCollum, James M.;
Dar, Roy D.;
Karig, David K.;
Cooke, John F.

Publication type:

Article

Exploring the functional composition of the human microbiome using a hand-curated microbial trait database.

Published in:

BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04216-2

By:

Weissman, Jake L.;
Dogra, Sonia;
Javadi, Keyan;
Bolten, Samantha;
Flint, Rachel;
Davati, Cyrus;
Beattie, Jess;
Dixit, Keshav;
Peesay, Tejasvi;
Awan, Shehar;
Thielen, Peter;
Breitwieser, Florian;
Johnson, Philip L. F.;
Karig, David;
Fagan, William F.;
Bewick, Sharon

Publication type:

Article

Direct Growth of Bacteria in Headspace Vials Allows for Screening of Volatiles by Gas Chromatography Mass Spectrometry.

Published in:

Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00491

By:

Timm, Collin M.;
Lloyd, Evan P.;
Egan, Amanda;
Mariner, Ray;
Karig, David

Publication type:

Article

A Stoichioproteomic Analysis of Samples from the Human Microbiome Project.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01119

By:

Vecchio-Pagan, Briana;
Bewick, Sharon;
Mainali, Kumar;
Karig, David K.;
Fagan, William F.

Publication type:

Article

Examining the effect of wound cleansing on the microbiome of venous stasis ulcers.

Published in:

Wound Repair & Regeneration, 2021, v. 29, n. 5, p. 766, doi. 10.1111/wrr.12926

By:

Ernlund, Amanda W.;
Moffatt, Lauren T.;
Timm, Collin M.;
Zudock, Kristina K.;
Howser, Craig W.;
Blount, Kianna M.;
Alkhalil, Abdulnaser;
Shupp, Jeffrey W.;
Karig, David K.

Publication type:

Article

Statistical analysis of co-occurrence patterns in microbial presence-absence datasets.

Published in:

PLoS ONE, 2017, v. 12, n. 11, p. 1, doi. 10.1371/journal.pone.0187132

By:

Mainali, Kumar P.;
Bewick, Sharon;
Fagan, William F.;
Thielen, Peter;
Mehoke, Thomas;
Wolfe, Joshua;
Karig, David;
Breitwieser, Florian P.;
Paudel, Shishir;
Adhikari, Arjun;
Slud, Eric V.

Publication type:

Article

Detecting interaction networks in the human microbiome with conditional Granger causality.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 5, p. 1, doi. 10.1371/journal.pcbi.1007037

By:

Mainali, Kumar;
Bewick, Sharon;
Vecchio-Pagan, Briana;
Karig, David;
Fagan, William F.

Publication type:

Article

Signal-amplifying genetic circuit enables in vivo observation of weak promoter activation in the Rhl quorum sensing system.

Published in:

Biotechnology & Bioengineering, 2005, v. 89, n. 6, p. 709, doi. 10.1002/bit.20371

By:

Karig, David;
Weiss, Ron

Publication type:

Article

Expression optimization and synthetic gene networks in cell-free systems.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 8, p. 3763, doi. 10.1093/nar/gkr1191

By:

Karig, David K.;
Iyer, Sukanya;
Simpson, Michael L.;
Doktycz, Mitchel J.

Publication type:

Article

Multi-Input Regulation and Logic with T7 Promoters in Cells and Cell-Free Systems.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0078442

By:

Iyer, Sukanya;
Karig, David K.;
Norred, S. Elizabeth;
Simpson, Michael L.;
Doktycz, Mitchel J.

Publication type:

Article

Screening microbiota for effects on host tissues.

Published in:

Biotechnology & Bioengineering, 2023, v. 120, n. 6, p. 1614, doi. 10.1002/bit.28363

By:

Timm, Andrea C.;
Brensinger, Bryan;
Hart, Meaghan;
Timm, Collin;
Karig, David

Publication type:

Article

Trait-based analysis of the human skin microbiome.

Published in:

Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0698-2

By:

Bewick, Sharon;
Gurarie, Eliezer;
Weissman, Jake L.;
Beattie, Jess;
Davati, Cyrus;
Flint, Rachel;
Thielen, Peter;
Breitwieser, Florian;
Karig, David;
Fagan, William F.

Publication type:

Article