Works by Kaptein, Robert

Results: 45

Hinge-helix formation and DNA bending in various lac repressor-operator complexes.

Published in:

EMBO Journal, 1999, v. 18, n. 22, p. 6472, doi. 10.1093/emboj/18.22.6472

By:

Spronk, Christian A. E. M.;
Folkers, Gert E.;
Noordman, Anne-Marie G. W.;
Wechselberger, Rainer;
Van Den Brink, Nienke;
Boelens, Rolf;
Kaptein, Robert

Publication type:

Article

The structure of the translational initiation factor IF1 from E.coli contains an oligomer-binding motif.

Published in:

EMBO Journal, 1997, v. 16, n. 6, p. 1436, doi. 10.1093/emboj/16.6.1436

By:

Sette, Marco;
van Tilborg, Paul;
Spurio, Roberto;
Kaptein, Robert;
Paci, Maurizio;
Gualerzi, Claudio O.;
Boelens, Rolf

Publication type:

Article

Sliding and target location of DNA-binding proteins:an NMR view of the lac repressor system.

Published in:

Journal of Biomolecular NMR, 2013, v. 56, n. 1, p. 41, doi. 10.1007/s10858-013-9723-0

By:

Loth, Karine;
Gnida, Manuel;
Romanuka, Julija;
Kaptein, Robert;
Boelens, Rolf

Publication type:

Article

NMR studies on protein-nucleic acid interaction.

Published in:

2013

By:

Kaptein, Robert

Publication type:

Editorial

Analysis of the XPA and ssDNA-binding surfaces on the central domain of human ERCC1 reveals evidence for subfunctionalization.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 17, p. 5789, doi. 10.1093/nar/gkm503

By:

Tripsianes, Konstantinos;
Folkers, Gert E.;
Zheng, Chao;
Das, Devashish;
Grinstead, Jeffrey S.;
Kaptein, Robert;
Boelens, Rolf

Publication type:

Article

RECOORD: A recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank.

Published in:

Proteins, 2005, v. 59, n. 4, p. 662, doi. 10.1002/prot.20408

By:

Nederveen, Aart J.;
Doreleijers, Jurgen F.;
Vranken, Wim;
Miller, Zachary;
Spronk, Chris A.E.M.;
Nabuurs, Sander B.;
Güntert, Peter;
Livny, Miron;
Markley, John L.;
Nilges, Michael;
Ulrich, Eldon L.;
Kaptein, Robert;
Bonvin, Alexandre M.J.J.

Publication type:

Article

Validation of nuclear magnetic resonance structures of proteins and nucleic acids: Hydrogen geometry and nomenclature.

Published in:

Proteins, 1999, v. 37, n. 3, p. 404, doi. 10.1002/(SICI)1097-0134(19991115)37:3<404::AID-PROT8>3.0.CO;2-2

By:

Doreleijers, Jurgen F.;
Vriend, Gerrit;
Raves, Mia L.;
Kaptein, Robert

Publication type:

Article

Refined solution structure of the c-terminal DNA-binding domain of human immunovirus-1 integrase.

Published in:

Proteins, 1999, v. 36, n. 4, p. 556, doi. 10.1002/(SICI)1097-0134(19990901)36:4<556::AID-PROT18>3.0.CO;2-6

By:

Eijkelenboom, Astrid P.A.M.;
Sprangers, Remco;
Hård, Karl;
Puras Lutzke, Ramon A.;
Plasterk, Ronald H.A.;
Boelens, Rolf;
Kaptein, Robert

Publication type:

Article

Role of aromatic amino acids in carbohydrate binding of plant lectins: Laser photo chemically induced dynamic nuclear polarization study of hevein domain-containing lectins.

Published in:

Proteins, 1997, v. 28, n. 2, p. 268, doi. 10.1002/(SICI)1097-0134(199706)28:2<268::AID-PROT14>3.0.CO;2-G

By:

Siebert, Hans-Christian;
von der Lieth, Claus-Wilhelm;
Kaptein, Robert;
Beintema, Jaap J.;
Dijkstra, Klaas;
van Nuland, Nico;
Soedjanaatmadja, Ukun M. S.;
Rice, Ann;
Vliegenthart, Johannes F. G.;
Wright, Christine S.;
Gabius, Hans-Joachim

Publication type:

Article

A model for the LexA repressor DNA complex.

Published in:

Proteins, 1995, v. 21, n. 3, p. 226, doi. 10.1002/prot.340210305

By:

Knegtel, Ronald M. A.;
Fogh, Rasmus H.;
Boelens, Rolf;
Kaptein, Robert;
Ottleben, Gunnar;
Rüterjans, Heinz;
Dumoulin, Pascal;
Schnarr, Manfred

Publication type:

Article

'Ensemble' iterative relaxation matrix approach: A new NMR refinement protocol applied to the solution structure of crambin.

Published in:

Proteins, 1993, v. 15, n. 4, p. 385, doi. 10.1002/prot.340150406

By:

Bonvin, Alexandre M. J. J.;
Rullmann, J. Antoon C.;
Lamerichs, Rolf M. J. N.;
Boelens, Rolf;
Kaptein, Robert

Publication type:

Article

Gradual phosphorylation regulates PC4 coactivator function.

Published in:

FEBS Journal, 2006, v. 273, n. 12, p. 1430, doi. 10.1111/j.1742-4658.2006.05165.x

By:

Jonker, Hendrik R. A.;
Wechselberger, Rainer W.;
Pinkse, Martijn;
Kaptein, Robert;
Folkers, Gert E.

Publication type:

Article

Level Anti-Crossings are a Key Factor for Understanding para-Hydrogen-Induced Hyperpolarization in SABRE Experiments.

Published in:

ChemPhysChem, 2013, v. 14, n. 14, p. 3327, doi. 10.1002/cphc.201300595

By:

Pravdivtsev, Andrey N.;
Yurkovskaya, Alexandra V.;
Vieth, Hans‐Martin;
Ivanov, Konstantin L.;
Kaptein, Robert

Publication type:

Article

Selective Hydrogenation of 1,3-Butadiene and 1-Butyne over a Rh/Chitosan Catalyst Investigated by using Parahydrogen-Induced Polarization.

Published in:

ChemCatChem, 2012, v. 4, n. 12, p. 2031, doi. 10.1002/cctc.201200414

By:

Barskiy, Danila A.;
Kovtunov, Kirill V.;
Primo, Ana;
Corma, Avelino;
Kaptein, Robert;
Koptyug, Igor V.

Publication type:

Article

Use of graph theory for secondary structure recognition and sequential assignment in heteronuclear (.

Published in:

Biopolymers, 1996, v. 39, n. 5, p. 691, doi. 10.1002/(SICI)1097-0282(199611)39:5<691::AID-BIP8>3.0.CO;2-R

By:

van Geerestein-Ujah, Elizabeth C.;
Mariani, Matteo;
Vis, Hans;
Boelens, Rolf;
Kaptein, Robert

Publication type:

Article

Hydrogen exchange studies of the Arc repressor: Evidence for a monomeric folding intermediate.

Published in:

Biopolymers, 1995, v. 35, n. 2, p. 217, doi. 10.1002/bip.360350210

By:

Burgering, Maurits J. M.;
Hald, Mogens;
Boelens, Rolf;
Breg, Jan N.;
Kaptein, Robert

Publication type:

Article

Direct nuclear Overhauser effect refinement of crambin from two-dimensional nmr data using a slow-cooling annealing protocol.

Published in:

Biopolymers, 1994, v. 34, n. 1, p. 39, doi. 10.1002/bip.360340106

By:

Bonvin, Alexandre M. J. J.;
Boelens, Rolf;
Kaptein, Robert

Publication type:

Article

Conformational analysis of a dinucleotide photodimer with the aid of the genetic algorithm.

Published in:

Biopolymers, 1992, v. 32, n. 1, p. 45, doi. 10.1002/bip.360320107

By:

Blommers, Marcel J. J.;
Lucasius, Carlos B.;
Kateman, Gerrit;
Kaptein, Robert

Publication type:

Article

Cooperative α-helix unfolding in a protein-DNA complex from hydrogen-deuterium exchange.

Published in:

Protein Science: A Publication of the Protein Society, 2006, v. 15, n. 7, p. 1752, doi. 10.1110/ps.051938006

By:

Salinas, Roberto K.;
Diercks, Tammo;
Kaptein, Robert;
Boelens, Rolf

Publication type:

Article

An alternate conformation of the hyperthermostable HU protein from Thermotoga maritima has unexpectedly high flexibility

Published in:

FEBS Letters, 2004, v. 563, n. 1-3, p. 49, doi. 10.1016/S0014-5793(04)00247-9

By:

Durney, Michael A.;
Wechselberger, Rainer W.;
Kalodimos, Charalampos G.;
Kaptein, Robert;
Vorgias, Constantinos E.;
Boelens, Rolf

Publication type:

Article

NMR investigation of the interaction of the inhibitor protein Im9 with its partner DNase.

Published in:

Protein Science: A Publication of the Protein Society, 2000, v. 9, n. 9, p. 1709

By:

BOETZEL, RUTH;
CZISCH, MICHAEL;
KAPTEIN, ROBERT;
HEMMINGS, ANDREW M.;
JAMES, RICHARD;
KLEANTHOUS, COLIN;
MOORE, GEOFFREY R.

Publication type:

Article

Slow conformational dynamics of an endonuclease persist in its complex with its natural protein inhibitor.

Published in:

Protein Science: A Publication of the Protein Society, 2000, v. 9, n. 4, p. 713

By:

WHITTAKER, SARA B.-M.;
CZISCH, MICHAEL;
WECHSELBERGER, RAINER;
KAPTEIN, ROBERT;
HEMMINGS, ANDREW M.;
JAMES, RICHARD;
KLEANTHOUS, COLIN;
MOORE, GEOFFREY R.

Publication type:

Article

The HhH domain of the human DNA repair protein XPF forms stable homodimers.

Published in:

Proteins, 2008, v. 70, n. 4, p. 1551, doi. 10.1002/prot.21635

By:

Das, Devashish;
Tripsianes, Konstantinos;
Jaspers, Nicolaas G. J.;
Hoeijmakers, Jan H. J.;
Kaptein, Robert;
Boelens, Rolf;
Folkers, Gert E.

Publication type:

Article

Structural and dynamic changes of photoactive yellow protein during its photocycle in solution.

Published in:

Nature Structural Biology, 1998, v. 5, n. 7, p. 568, doi. 10.1038/823

By:

Rubinstenn, Gilles;
Vuister, Geerten W.;
Mulder, Frans A. A.;
Düx, Petra E.;
Boelens, Rolf;
Hellingwerf, Klaas J.;
Kaptein, Robert

Publication type:

Article

The Solution Structure of the AppA BLUF Domain: Insight into the Mechanism of Light-Induced Signaling.

Published in:

ChemBioChem, 2006, v. 7, n. 1, p. 187, doi. 10.1002/cbic.200500270

By:

Jeffrey S. Grinstead;
Shang-Te D. Hsu;
Wouter Laan;
Alexandre M. J. J. Bonvin;
Klaas J. Hellingwerf;
Rolf Boelens;
Robert Kaptein

Publication type:

Article

Altered Specificity in DNA Binding by the lac Repressor: A Mutant lac Headpiece that Mimics the gal Repressor.

Published in:

ChemBioChem, 2005, v. 6, n. 9, p. 1628, doi. 10.1002/cbic.200500049

By:

Roberto Kopke Salinas;
Gert E. Folkers;
Alexandre M. J. J. Bonvin;
Devashish Das;
Rolf Boelens;
Robert Kaptein

Publication type:

Article

A residue-specific view of the association and dissociation pathway in protein?DNA recognition.

Published in:

Nature Structural Biology, 2002, v. 9, n. 3, p. 193

By:

Kalodimos, Charalampos G.;
Boelens, Rolf;
Kaptein, Robert

Publication type:

Article

The tetramerization domain of the Mnt repressor consists of two right-handed coiled coils.

Published in:

Nature Structural Biology, 1999, v. 6, n. 8, p. 755

By:

Nooren, Irene M.A.;
Kaptein, Robert;
Sauer, Robert T.;
Boelens, Rolf

Publication type:

Article

Comparison between intact and desialylated human serum amyloid P component by laser photo CIDNP (chemically induced dynamic nuclear polarization) technique: an indication for a conformational impact of sialic acid.

Published in:

Glycoconjugate Journal, 1997, v. 14, n. 8, p. 945, doi. 10.1023/A:1018570912192

By:

Siebert, Hans-Christian;
Andre, Sabine;
Reuter, Gerd;
Kaptein, Robert;
Vliegenthart, Johannes;
Gabius, Hans-Joachim

Publication type:

Article

Carbohydrate-protein interaction studies by laser photo CIDNP NMR methods.

Published in:

Glycoconjugate Journal, 1997, v. 14, n. 4, p. 531, doi. 10.1023/A:1018572023153

By:

Siebert, Hans-Christian;
Kaptein, Robert;
Beintema, Jaap;
Soedjanaatmadja, Ukun;
Wright, Christine;
Rice, Ann;
Kleineidam, Reinhard;
Kruse, Susanne;
Schauer, Roland;
Pouwels, Petra;
Kamerling, Johannis;
Gabius, Hans-Joachim;
Vliegenthart, Johannes

Publication type:

Article

The Fanconi anemia associated protein FAAP24 uses two substrate specific binding surfaces for DNA recognition.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6739, doi. 10.1093/nar/gkt354

By:

Wienk, Hans;
Slootweg, Jack C.;
Speerstra, Sietske;
Kaptein, Robert;
Boelens, Rolf;
Folkers, Gert E.

Publication type:

Article

X-ray absorption spectroscopic studies of zinc in the N-terminal domain of HIV-2 integrase and model compounds.

Published in:

Journal of Synchrotron Radiation, 2003, v. 10, n. 1, p. 86, doi. 10.1107/S0909049502016205

By:

Feiters, Martinus C.;
Eijkelenboom, Astrid P.A.M.;
Nolting, Hans-Friedrich;
Krebs, Bernt;
van den Ent, Fusinita M.I.;
Plasterk, Ronald H.A.;
Kaptein, Robert;
Boelens, Rolf

Publication type:

Article

Plasticity in protein–DNA recognition: lac repressor interacts with its natural operator O1 through alternative conformations of its DNA‐binding domain.

Published in:

EMBO Journal, 2002, v. 21, n. 12, p. 2866, doi. 10.1093/emboj/cdf318

By:

Kalodimos, Charalampos G.;
Bonvin, Alexandre M.J.J;
Salinas, Roberto K.;
Wechselberger, Rainer;
Boelens, Rolf;
Kaptein, Robert

Publication type:

Article

Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator O1 through alternative conformations of its DNA-binding domain.

Published in:

EMBO Journal, 2002, v. 21, n. 12, p. 2866, doi. 10.1093/emboj/cdf318

By:

Kalodimos, Charalampos G.;
Bonvin, Alexandre M.J.J.;
Salinas, Roberto K.;
Wechselberger, Rainer;
Boelens, Roif;
Kaptein, Robert

Publication type:

Article

The nisin-lipid II complex reveals a pyrophosphate cage that provides a blueprint for novel antibiotics.

Published in:

Nature Structural & Molecular Biology, 2004, v. 11, n. 10, p. 963, doi. 10.1038/nsmb830

By:

Hsu, Shang-Te D;
Breukink, Eefjan;
Tischenko, Eugene;
Lutters, Mandy A. G.;
de Kruijff, Ben;
Kaptein, Robert;
Bonvin, Alexandre M. J. J.;
van Nuland, Nico A. J.

Publication type:

Article

Combining NMR Relaxation with Chemical Shift Perturbation Data to Drive Protein–protein Docking.

Published in:

Journal of Biomolecular NMR, 2006, v. 34, n. 4, p. 237, doi. 10.1007/s10858-006-0024-8

By:

van Dijk, Aalt D. J.;
Kaptein, Robert;
Boelens, Rolf;
Bonvin, Alexandre M. J. J.

Publication type:

Article

Extended Flip-back Schemes for Sensitivity Enhancement in Multidimensional HSQC-type Out-and-back Experiments.

Published in:

Journal of Biomolecular NMR, 2005, v. 33, n. 4, p. 243, doi. 10.1007/s10858-005-3868-4

By:

Diercks, Tammo;
Daniels, Mark;
Kaptein, Robert

Publication type:

Article

Describing Partially Unfolded States of Proteins from Sparse NMR Ddata.

Published in:

Journal of Biomolecular NMR, 2005, v. 33, n. 3, p. 175, doi. 10.1007/s10858-005-3207-9

By:

Fuentes, Gloria;
Nederveen, Aart J.;
Kaptein, Robert;
Boelens, Rolf;
Bonvin, Alexandre M. J. J.

Publication type:

Article

BioMagResBank databases DOCR and FRED containing converted and filtered sets of experimental NMR restraints and coordinates from over 500 protein PDB structures.

Published in:

Journal of Biomolecular NMR, 2005, v. 32, n. 1, p. 1, doi. 10.1007/s10858-005-2195-0

By:

Doreleijers, Jurgen F.;
Nederveen, Aart J.;
Vranken, Wim;
Jundong Lin;
Bonvin, Alexandre M. J. J.;
Kaptein, Robert;
Markley, John L.;
Ulrich, Eldon L.

Publication type:

Article

Rapid protein fold determination using secondary chemical shifts and cross-hydrogen bond 15N-13C′ scalar couplings (3hbJNC′).

Published in:

Journal of Biomolecular NMR, 2001, v. 21, n. 3, p. 221, doi. 10.1023/A:1012935005256

By:

Bonvin, Alexandre M. J. J.;
Houben, Klaartje;
Guenneugues, Marc;
Kaptein, Robert;
Boelens, Rolf

Publication type:

Article

Joint refinement as a tool for thorough comparison between NMR and X-ray data and structures of HU protein.

Published in:

Journal of Biomolecular NMR, 2001, v. 21, n. 3, p. 235, doi. 10.1023/A:1012927325963

By:

Raves, Mia L.;
Doreleijers, Jurgen F.;
Vis, Hans;
Vorgias, Constantin E.;
Wilson, Keith S.;
Kaptein, Robert

Publication type:

Article

Refined solution structure of the dimeric N-terminal HHCC domain of HIV-2 integrase.

Published in:

Journal of Biomolecular NMR, 2000, v. 18, n. 2, p. 119, doi. 10.1023/A:1008342312269

By:

Eijkelenboom, Astrid P.A.M.;
van den Ent, Fusinita M.I.;
Wechselberger, Rainer;
Plasterk, Ronald H.A.;
Kaptein, Robert;
Boelens, Rolf

Publication type:

Article

The auto-orientation in high magnetic fields of oxidized cytochrome b562 as source of constraints for solution structure determination.

Published in:

Journal of Biomolecular NMR, 2000, v. 17, n. 4, p. 295, doi. 10.1023/A:1008308501053

By:

Arnesano, Fabio;
Banci, Lucia;
Bertini, Ivano;
van der Wetering, Karin;
Czisch, Michael;
Kaptein, Robert

Publication type:

Article

PHOTO-CIDNP STUDY OF PYRIMIDINE DIMER SPLITTING II: REACTIONS INVOLVING PYRIMIDINE RADICAL ANION INTERMEDIATES.

Published in:

Photochemistry & Photobiology, 1995, v. 61, n. 6, p. 575, doi. 10.1111/j.1751-1097.1995.tb09872.x

By:

Pouwels, Petra J. W.;
Kaptein, Robert;
Hartman, Rosemarie F.;
Rose, Seth D.

Publication type:

Article

PHOTO-CIDNP STUDY OF PYRIMIDINE DIMER SPLITTING I: REACTIONS INVOLVING PYRIMIDINE RADICAL CATION INTERMEDIATES.

Published in:

Photochemistry & Photobiology, 1995, v. 61, n. 6, p. 563, doi. 10.1111/j.1751-1097.1995.tb09871.x

By:

Pouwels, Petra J. W.;
Kaptein, Robert;
Hartman, Rosemarie F.;
Rose, Seth D.

Publication type:

Article