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Bayesian inference is facilitated by modular neural networks with different time scales.
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- PLoS Computational Biology, 2024, v. 20, n. 3, p. 1, doi. 10.1371/journal.pcbi.1011897
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- Article
Developmental hourglass: Verification by numerical evolution and elucidation by dynamical-systems theory.
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- PLoS Computational Biology, 2024, v. 20, n. 2, p. 1, doi. 10.1371/journal.pcbi.1011867
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- Article
Transition of social organisations driven by gift relationships.
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- Humanities & Social Sciences Communications, 2023, v. 10, n. 1, p. 1, doi. 10.1057/s41599-023-01688-w
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- Article
A linear reciprocal relationship between robustness and plasticity in homeostatic biological networks.
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- PLoS ONE, 2023, v. 17, n. 1, p. 1, doi. 10.1371/journal.pone.0277181
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- Article
Autotoxin-mediated latecomer killing in yeast communities.
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- PLoS Biology, 2022, v. 20, n. 11, p. 1, doi. 10.1371/journal.pbio.3001844
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- Article
Statistical Trends of Protein Evolution: A Lesson from AlphaFold Database.
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- Molecular Biology & Evolution, 2022, v. 39, n. 10, p. 1, doi. 10.1093/molbev/msac197
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- Article
Chemophoresis engine: A general mechanism of ATPase-driven cargo transport.
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- PLoS Computational Biology, 2022, v. 18, n. 7, p. 1, doi. 10.1371/journal.pcbi.1010324
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- Article
A scaling law of multilevel evolution: how the balance between within- and among-collective evolution is determined.
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- Genetics, 2022, v. 220, n. 2, p. 1, doi. 10.1093/genetics/iyab182
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- Article
Dynamical systems approach to evolution–development congruence: Revisiting Haeckel's recapitulation theory.
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- Journal of Experimental Zoology Part B: Molecular & Developmental Evolution, 2022, v. 338, n. 1, p. 62, doi. 10.1002/jez.b.23031
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- Article
Multiple-Timescale Neural Networks: Generation of History-Dependent Sequences and Inference Through Autonomous Bifurcations.
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- Frontiers in Computational Neuroscience, 2021, v. 15, p. 1, doi. 10.3389/fncom.2021.743537
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- Article
Evolution of phenotypic fluctuation under host-parasite interactions.
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- PLoS Computational Biology, 2021, v. 17, n. 11, p. 1, doi. 10.1371/journal.pcbi.1008694
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- Article
Adaptation of metabolite leakiness leads to symbiotic chemical exchange and to a resilient microbial ecosystem.
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- PLoS Computational Biology, 2021, v. 17, n. 6, p. 1, doi. 10.1371/journal.pcbi.1009143
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- Article
Evolution of dominance in gene expression pattern associated with phenotypic robustness.
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- BMC Ecology & Evolution, 2021, v. 21, p. 1, doi. 10.1186/s12862-021-01841-6
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- Article
Long-range correlation in protein dynamics: Confirmation by structural data and normal mode analysis.
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- PLoS Computational Biology, 2020, v. 16, n. 2, p. 1, doi. 10.1371/journal.pcbi.1007670
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- Article
Statistical Evolutionary Laws in Music Styles.
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- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-52380-6
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- Article
Horizontal transfer between loose compartments stabilizes replication of fragmented ribozymes.
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- PLoS Computational Biology, 2019, v. 15, n. 6, p. 1, doi. 10.1371/journal.pcbi.1007094
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- Article
Molecular Diversity and Network Complexity in Growing Protocells.
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- Life (2075-1729), 2019, v. 9, n. 2, p. 53, doi. 10.3390/life9020053
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- Article
The origin of a primordial genome through spontaneous symmetry breaking.
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- Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00243-x
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- Article
Stronger selection can slow down evolution driven by recombination on a smooth fitness landscape.
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- PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0183120
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- Article
Dynamics robustness of cascading systems.
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- PLoS Computational Biology, 2017, v. 13, n. 3, p. 1, doi. 10.1371/journal.pcbi.1005434
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- Article
Embedding dual function into molecular motors through collective motion.
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- Scientific Reports, 2017, p. 44288, doi. 10.1038/srep44288
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- Article
Symbiotic Cell Differentiation and Cooperative Growth in Multicellular Aggregates.
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- PLoS Computational Biology, 2016, v. 12, n. 10, p. 1, doi. 10.1371/journal.pcbi.1005042
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- Article
Dynamic Organization of Hierarchical Memories.
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- PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0162640
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- Article
An 80-gene set to predict response to preoperative chemoradiotherapy for rectal cancer by principle component analysis.
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- Molecular & Clinical Oncology, 2016, v. 4, n. 5, p. 733, doi. 10.3892/mco.2016.806
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- Article
Evolution-development congruence in pattern formation dynamics: Bifurcations in gene expression and regulation of networks structures.
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- Journal of Experimental Zoology Part B: Molecular & Developmental Evolution, 2016, v. 326, n. 1, p. 61, doi. 10.1002/jez.b.22666
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- Article
Impact of sub and supra-threshold adaptation currents in networks of spiking neurons.
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- Journal of Computational Neuroscience, 2015, v. 39, n. 3, p. 255, doi. 10.1007/s10827-015-0575-3
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- Article
Pluripotency, Differentiation, and Reprogramming: A Gene Expression Dynamics Model with Epigenetic Feedback Regulation.
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- PLoS Computational Biology, 2015, v. 11, n. 8, p. 1, doi. 10.1371/journal.pcbi.1004476
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- Article
Transition to diversification by competition for multiple resources in catalytic reaction networks.
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- Journal of Systems Chemistry, 2015, v. 6, p. 1, doi. 10.1186/s13322-015-0010-1
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- Article
Gene-specific selective sweeps in bacteria and archaea caused by negative frequency-dependent selection.
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- BMC Biology, 2015, v. 13, n. 1, p. 1, doi. 10.1186/s12915-015-0131-7
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- Article
Compartmentalization and Cell Division through Molecular Discreteness and Crowding in a Catalytic Reaction Network.
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- Life (2075-1729), 2014, v. 4, n. 4, p. 586, doi. 10.3390/life4040586
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- Article
Kinetic Memory Based on the Enzyme-Limited Competition.
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- PLoS Computational Biology, 2014, v. 10, n. 8, p. 1, doi. 10.1371/journal.pcbi.1003784
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- Article
Homeostasis of the period of post-translational biochemical oscillators.
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- FEBS Letters, 2014, v. 588, n. 14, p. 2282, doi. 10.1016/j.febslet.2014.05.015
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- Article
大沢流手づくり統計力学.
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- Seibutsu Butsuri, 2013, v. 53, n. 6, p. 339
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- Article
A RULE SET TO SELECT REPRESENTATIVE NOUNS FROM A NOUN SYNONYM SET FOR A JAPANESE FISHING WEBSITE.
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- International Journal of Electronic Commerce Studies, 2013, v. 4, n. 2, p. 323, doi. 10.7903/ijecs.1125
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- Article
Epigenetic Feedback Regulation Accelerates Adaptation and Evolution
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- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0061251
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- Article
Embedding Responses in Spontaneous Neural Activity Shaped through Sequential Learning.
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- PLoS Computational Biology, 2013, v. 9, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002943
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- Article
PARALLEL IMAGE DATABASE PROCESSING WITH MAPREDUCE AND PERFORMANCE EVALUATION IN PSEUDO DISTRIBUTED MODE.
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- International Journal of Electronic Commerce Studies, 2012, v. 3, n. 2, p. 211, doi. 10.7903/ijecs.1092
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- Article
Evolution of Robustness and Plasticity under Environmental Fluctuation: Formulation in Terms of Phenotypic Variances.
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- Journal of Statistical Physics, 2012, v. 148, n. 4, p. 686, doi. 10.1007/s10955-012-0563-1
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- Article
Learning to memorize input--output mapping as bifurcation in neural dynamics: relevance of multiple timescales for synapse changes.
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- Neural Computing & Applications, 2012, v. 21, n. 4, p. 725, doi. 10.1007/s00521-011-0650-2
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- Article
Correction: Proportionality between variances in gene expression induced by noise and mutation: consequence of evolutionary robustness.
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- 2012
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- Correction notice
Oscillatory Protein Expression Dynamics Endows Stem Cells with Robust Differentiation Potential.
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- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027232
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- Article
Characterization of stem cells and cancer cells on the basis of gene expression profile stability, plasticity, and robustness.
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- BioEssays, 2011, v. 33, n. 6, p. 403, doi. 10.1002/bies.201000153
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- Article
Fluctuation and response in biology.
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- Cellular & Molecular Life Sciences, 2011, v. 68, n. 6, p. 1005, doi. 10.1007/s00018-010-0589-y
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- Article
Learning Shapes Spontaneous Activity Itinerating over Memorized States.
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- PLoS ONE, 2011, v. 6, n. 3, p. 1, doi. 10.1371/journal.pone.0017432
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- Article
Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning.
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- Biophysics (13492942), 2011, v. 7, p. 77, doi. 10.2142/biophysics.7.77
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- Article
Proportionality between variances in gene expression induced by noise and mutation: consequence of evolutionary robustness.
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- BMC Evolutionary Biology, 2011, v. 11, n. 1, p. 27, doi. 10.1186/1471-2148-11-27
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- Article
Robustness under Functional Constraint: The Genetic Network for Temporal Expression in Drosophila Neurogenesis.
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- PLoS Computational Biology, 2010, v. 6, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000760
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- Article
Network Evolution of Spatial Pattern Formation.
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- Seibutsu Butsuri, 2010, v. 50, n. 1, p. 18, doi. 10.2142/biophys.50.018
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- Article
Transient process of cortical activity during Necker cube perception: from local clusters to global synchrony.
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- Nonlinear Biomedical Physics, 2010, v. 4, p. 1, doi. 10.1186/1753-4631-4-S1-S7
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- Article
Relationship among phenotypic plasticity, phenotypic fl uctuations, robustness, and evolvability; Waddington’s legacy revisited under the spirit of Einstein.
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- Journal of Biosciences, 2009, v. 34, n. 4, p. 529, doi. 10.1007/s12038-009-0072-9
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- Article