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A long-range interactive DNA methylation marker panel for the promoters of HOXA9 and HOXA10 predicts survival in breast cancer patients.
- Published in:
- Clinical Epigenetics, 2017, v. 9, p. 1, doi. 10.1186/s13148-017-0373-z
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- Article
P4‐701: POLYMORPHISM IN MAGI2 GENE MODIFIES THE EFFECT OF AMYLOID β ON NEURODEGENERATION.
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- Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2019, v. 15, p. P1600, doi. 10.1016/j.jalz.2019.09.065
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- Article
Predicting the recurrence of noncoding regulatory mutations in cancer.
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- BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-1385-y
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- Article
Environmental Effects on Gene Expression Phenotype Have Regional Biases in the Human Genome.
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- Genetics, 2007, v. 175, n. 4, p. 1607, doi. 10.1534/genetics.106.069047
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- Article
Impact of Transcriptional Properties on Essentiality and Evolutionary Rate.
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- Genetics, 2007, v. 175, n. 1, p. 199, doi. 10.1534/genetics.106.066027
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- Article
Global transcription network incorporating distal regulator binding reveals selective cooperation of cancer drivers and risk genes.
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- Nucleic Acids Research, 2015, v. 43, n. 12, p. 5716, doi. 10.1093/nar/gkv532
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- Article
Genome-wide reorganization of histone H2AX toward particular fragile sites on cell activation.
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- Nucleic Acids Research, 2014, v. 42, n. 2, p. 1016, doi. 10.1093/nar/gkt951
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- Article
Genome-wide profiles of H2AX and γ-H2AX differentiate endogenous and exogenous DNA damage hotspots in human cells.
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- Nucleic Acids Research, 2012, v. 40, n. 13, p. 5965, doi. 10.1093/nar/gks287
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- Article
L1 retrotransposons exploit RNA m<sup>6</sup>A modification as an evolutionary driving force.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21197-1
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- Publication type:
- Article
Single-cell mapping of combinatorial target antigens for CAR switches using logic gates.
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- Nature Biotechnology, 2023, v. 41, n. 11, p. 1593, doi. 10.1038/s41587-023-01686-y
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- Article
Intrinsic variability of gene expression encoded in nucleosome positioning sequences.
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- Nature Genetics, 2009, v. 41, n. 4, p. 498, doi. 10.1038/ng.319
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- Article
Epigenetic regulation and the variability of gene expression.
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- Nature Genetics, 2008, v. 40, n. 2, p. 141, doi. 10.1038/ng.2007.58
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- Article
LncRNA HSPA7 in human atherosclerotic plaques sponges miR-223 and promotes the proinflammatory vascular smooth muscle cell transition.
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- Experimental & Molecular Medicine EMM, 2021, v. 53, n. 12, p. 1842, doi. 10.1038/s12276-021-00706-8
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- Article
Selection on the regulation of sympathetic nervous activity in humans and chimpanzees.
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- PLoS Genetics, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.pgen.1007311
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- Article
Whole-Genome and Transcriptome Sequencing Identified NOTCH2 and HES1 as Potential Markers of Response to Imatinib in Desmoid Tumor (Aggressive Fibromatosis): A Phase II Trial Study.
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- Cancer Research & Treatment, 2022, v. 54, n. 4, p. 1240, doi. 10.4143/crt.2021.1194
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- Article
Genetic and Metabolic Characterization of Insomnia.
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- PLoS ONE, 2011, v. 6, n. 4, p. 1, doi. 10.1371/journal.pone.0018455
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- Article
Stochastic and Regulatory Role of Chromatin Silencing in Genomic Response to Environmental Change.
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- PLoS ONE, 2008, v. 3, n. 8, p. 1, doi. 10.1371/journal.pone.0003002
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- Article
Genome-wide methylation profiling of ADPKD identified epigenetically regulated genes associated with renal cyst development.
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- Human Genetics, 2014, v. 133, n. 3, p. 281, doi. 10.1007/s00439-013-1378-0
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- Article
DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load.
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- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-12159-9
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- Article
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis.
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- Communications Biology, 2020, v. 3, n. 1, p. 1, doi. 10.1038/s42003-019-0741-7
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- Article
Gene essentiality for tumour growth influences neoantigen‐directed immunoediting.
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- Clinical & Translational Medicine, 2022, v. 12, n. 1, p. 1, doi. 10.1002/ctm2.714
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- Article
Frequent hypermethylation of orphan CpG islands with enhancer activity in cancer.
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- BMC Medical Genomics, 2016, v. 9, p. 89, doi. 10.1186/s12920-016-0198-1
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- Article
Histone variant H3F3A promotes lung cancer cell migration through intronic regulation.
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- Nature Communications, 2016, v. 7, n. 10, p. 12914, doi. 10.1038/ncomms12914
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- Article
Genetic factors underlying discordance in chromatin accessibility between monozygotic twins.
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- Genome Biology, 2014, v. 15, n. 5, p. 2, doi. 10.1186/gb-2014-15-5-r72
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- Article
Short tandem repeat expansions in cortical layer‐specific genes implicate in phenotypic severity and adaptability of autism spectrum disorder.
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- Psychiatry & Clinical Neurosciences, 2024, v. 78, n. 7, p. 405, doi. 10.1111/pcn.13676
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- Article
Functional fine-mapping of noncoding risk variants in amyotrophic lateral sclerosis utilizing convolutional neural network.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-69790-6
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- Article
Genome-wide methylation patterns predict clinical benefit of immunotherapy in lung cancer.
- Published in:
- Clinical Epigenetics, 2020, v. 12, n. 1, p. 1, doi. 10.1186/s13148-020-00907-4
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- Article
Network perturbation by recurrent regulatory variants in cancer.
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- PLoS Computational Biology, 2017, v. 13, n. 3, p. 1, doi. 10.1371/journal.pcbi.1005449
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- Article
Differential coexpression analysis using microarray data and its application to human cancer.
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- Bioinformatics, 2005, v. 21, n. 24, p. 4348, doi. 10.1093/bioinformatics/bti722
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- Article
TO-GO: a Java-based Gene Ontology navigation environment.
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- Bioinformatics, 2005, v. 21, n. 17, p. 3580
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- Publication type:
- Article
DeepNeo: a webserver for predicting immunogenic neoantigens.
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- Nucleic Acids Research, 2023, v. 51, n. W1, p. W134, doi. 10.1093/nar/gkad275
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- Article
Convolutional neural network model to predict causal risk factors that share complex regulatory features.
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- Nucleic Acids Research, 2019, v. 47, n. 22, p. e146, doi. 10.1093/nar/gkz868
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- Publication type:
- Article
Selected heterozygosity at cis-regulatory sequences increases the expression homogeneity of a cell population in humans.
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- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1027-8
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- Article
Global mapping of the regulatory interactions of histone residues.
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- FEBS Letters, 2015, v. 589, n. 24PartB, p. 4061, doi. 10.1016/j.febslet.2015.11.016
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- Article
Regulation of the Boundaries of Accessible Chromatin.
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- PLoS Genetics, 2013, v. 9, n. 9, p. 1, doi. 10.1371/journal.pgen.1003778
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- Article
Genetic Landscape of Open Chromatin in Yeast.
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- PLoS Genetics, 2013, v. 9, n. 2, p. 1, doi. 10.1371/journal.pgen.1003229
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- Article
Systematic dissection of tumor-normal single-cell ecosystems across a thousand tumors of 30 cancer types.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48310-4
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- Publication type:
- Article
Computational inference of cancer-specific vulnerabilities in clinical samples.
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- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02077-1
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- Publication type:
- Article
Computational inference of cancer-specific vulnerabilities in clinical samples.
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- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02077-1
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- Publication type:
- Article
Integrative analysis of multiple gene expression profiles applied to liver cancer study
- Published in:
- FEBS Letters, 2004, v. 565, n. 1-3, p. 93, doi. 10.1016/j.febslet.2004.03.081
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- Article
Altered tumor signature and T‐cell profile after chemotherapy reveal new therapeutic opportunities in high‐grade serous ovarian carcinoma.
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- Cancer Science, 2024, v. 115, n. 3, p. 989, doi. 10.1111/cas.16074
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- Article
Author Correction: Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis.
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- 2022
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- Publication type:
- Correction Notice
L1 retrotransposons exploit RNA m<sup>6</sup>A modification as an evolutionary driving force.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21197-1
- By:
- Publication type:
- Article
Predicting clinical benefit of immunotherapy by antigenic or functional mutations affecting tumour immunogenicity.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-14562-z
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- Publication type:
- Article
Combined burden and functional impact tests for cancer driver discovery using DriverPower.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-13929-1
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- Publication type:
- Article
Predictive long-range allele-specific mapping of regulatory variants and target transcripts.
- Published in:
- PLoS ONE, 2017, v. 12, n. 4, p. 1, doi. 10.1371/journal.pone.0175768
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- Publication type:
- Article