OpenURL Connection Search

Select item for more details and to access through your institution.

Emergence and evolution of mosaic penA-60 and penA-237 alleles in a Neisseria gonorrhoeae core genogroup that was historically susceptible to extended spectrum cephalosporins.
Published in:
Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1401303
By:
- Thomas IV, Jesse C.;
- Cartee, John C.;
- Hebrank, Katherine;
- St. Cyr, Sancta B.;
- Schlanger, Karen;
- Raphael, Brian H.;
- Kersh, Ellen N.;
- Joseph, Sandeep J.
Publication type:
Article
Phylogenomic Comparison of Neisseria gonorrhoeae Causing Disseminated Gonococcal Infections and Uncomplicated Gonorrhea in Georgia, United States.
Published in:
Open Forum Infectious Diseases, 2022, v. 9, n. 7, p. 1, doi. 10.1093/ofid/ofac247
By:
- Cartee, John C;
- Joseph, Sandeep J;
- Weston, Emily;
- Pham, Cau D;
- Thomas, Jesse C;
- Schlanger, Karen;
- Cyr, Sancta B St;
- Farley, Monica M;
- Moore, Ashley E;
- Tunali, Amy K;
- Cloud, Charletta;
- Raphael, Brian H
Publication type:
Article
Emergence and evolution of mosaic penA-60 and penA-237 alleles in a Neisseria gonorrhoeae core genogroup that was historically susceptible to extended spectrum cephalosporins.
Published in:
Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1401303
By:
- Thomas IV, Jesse C.;
- Cartee, John C.;
- Hebrank, Katherine;
- St. Cyr, Sancta B.;
- Kersh, Ellen N.;
- Joseph, Sandeep J.
Publication type:
Article
Patterns of within-host spread of Chlamydia trachomatis between vagina, endocervix and rectum revealed by comparative genomic analysis.
Published in:
Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2023.1154664
By:
- Joseph, Sandeep J.;
- Bommana, Sankhya;
- Ziklo, Noa;
- Kama, Mike;
- Dean, Deborah;
- Read, Timothy D.
Publication type:
Article
Tet(C) Gene Transfer between Chlamydia suis Strains Occurs by Homologous Recombination after Co-infection: Implications for Spread of Tetracycline-Resistance among Chlamydiaceae.
Published in:
Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00156
By:
- Marti, Hanna;
- Hoyon Kim;
- Joseph, Sandeep J.;
- Dojiri, Stacey;
- Read, Timothy D.;
- Dean, Deborah
Publication type:
Article
Phylogenomic analysis reveals persistence of gonococcal strains with reduced-susceptibility to extended-spectrum cephalosporins and mosaic penA-34.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-24072-1
By:
- Thomas IV, Jesse C.;
- Joseph, Sandeep J.;
- Cartee, John C.;
- Pham, Cau D.;
- Schmerer, Matthew W.;
- Schlanger, Karen;
- St. Cyr, Sancta B.;
- Kersh, Ellen N.;
- Raphael, Brian H.;
- the Antimicrobial Resistant Neisseria gonorrhoeae Working Group;
- Dominguez, Cathy;
- Patel, Ami;
- Loomis, Jillian;
- Hun, Sopheay;
- Ruiz, Ryan;
- Talosig, Nicole;
- Hua, Chi;
- Zhang, Jenny;
- Oh, Bonnie;
- Leavitt, John
Publication type:
Article
Genome-wide recombination in Chlamydia trachomatis.
Published in:
Nature Genetics, 2012, v. 44, n. 4, p. 364, doi. 10.1038/ng.2225
By:
- Joseph, Sandeep J;
- Read, Timothy D
Publication type:
Article
Dynamics of genome change among Legionella species.
Published in:
Scientific Reports, 2016, p. 33442, doi. 10.1038/srep33442
By:
- Joseph, Sandeep J.;
- Cox, Daniel;
- Wolff, Bernard;
- Morrison, Shatavia S.;
- Kozak-Muiznieks, Natalia A.;
- Frace, Michael;
- Didelot, Xavier;
- Castillo-Ramirez, Santiago;
- Winchell, Jonas;
- Read, Timothy D.;
- Dean, Deborah
Publication type:
Article
Genomic Insights on Variation Underlying Capsule Expression in Meningococcal Carriage Isolates From University Students, United States, 2015–2016.
Published in:
Frontiers in Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fmicb.2022.815044
By:
- Whaley, Melissa J.;
- Vuong, Jeni T.;
- Topaz, Nadav;
- Chang, How-Yi;
- Thomas, Jennifer Dolan;
- Jenkins, Laurel T.;
- Hu, Fang;
- Schmink, Susanna;
- Steward-Clark, Evelene;
- Mathis, Marsenia;
- Rodriguez-Rivera, Lorraine D.;
- Retchless, Adam C.;
- Joseph, Sandeep J.;
- Chen, Alexander;
- Acosta, Anna M.;
- McNamara, Lucy;
- Soeters, Heidi M.;
- Mbaeyi, Sarah;
- Marjuki, Henju;
- Wang, Xin
Publication type:
Article
Direct Amplification, Sequencing and Profiling of <i>Chlamydia trachomatis</i> Strains in Single and Mixed Infection Clinical Samples.
Published in:
PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099290
By:
- Joseph, Sandeep J.;
- Li, Ben;
- Ghonasgi, Tanvi;
- Haase, Chad P.;
- Qin, Zhaohui S.;
- Dean, Deborah;
- Read, Timothy D.
Publication type:
Article
A Multiplexed Microfluidic PCR Assay for Sensitive and Specific Point-of-Care Detection of Chlamydia trachomatis.
Published in:
PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0051685
By:
- Dean, Deborah;
- Turingan, Rosemary S.;
- Thomann, Hans-Ulrich;
- Zolotova, Anna;
- Rothschild, James;
- Joseph, Sandeep J.;
- Read, Timothy D.;
- Tan, Eugene;
- Selden, Richard F.
Publication type:
Article
Patterns of within-host spread of Chlamydia trachomatis between vagina, endocervix and rectum revealed by comparative genomic analysis.
Published in:
Frontiers in Microbiology, 2023, v. 14, p. 1, doi. 10.3389/fmicb.2023.1154664
By:
- Joseph, Sandeep J.;
- Bommana, Sankhya;
- Ziklo, Noa;
- Kama, Mike;
- Dean, Deborah;
- Read, Timothy D.
Publication type:
Article
Naegleria genus pangenome reveals new structural and functional insights into the versatility of these free-living amoebae.
Published in:
Frontiers in Microbiology, 2023, v. 14, p. 1, doi. 10.3389/fmicb.2022.1056418
By:
- Dereeper, Alexis;
- Allouch, Nina;
- Guerlais, Vincent;
- Garnier, Maëlle;
- Ma, Laurence;
- De Jonckheere, Johan F.;
- Joseph, Sandeep J.;
- Ali, Ibne Karim M.;
- Talarmin, Antoine;
- Marcelino, Isabel
Publication type:
Article
Effect of Diet Supplementation on the Expression of Bovine Genes Associated with Fatty Acid Synthesis and Metabolism.
Published in:
Bioinformatics & Biology Insights, 2010, n. 4, p. 19, doi. 10.4137/BBI.S4168
By:
- Joseph, Sandeep J.;
- Robbins, Kelly R.;
- Pavan, Enrique;
- Pratt, Scott L.;
- Duckett, Susan K.;
- Rekaya, Romdhane
Publication type:
Article
Omega-6 Fat Supplementation Alters Lipogenic Gene Expression in Bovine Subcutaneous Adipose Tissue.
Published in:
Gene Regulation & Systems Biology, 2010, n. 4, p. 91, doi. 10.4137/GRSB.S5831
By:
- Joseph, Sandeep J.;
- Pratt, Scott L.;
- Pavan, Enrique;
- Rekaya, Romdhane;
- Duckett, Susan K.
Publication type:
Article
Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure.
Published in:
Molecular Biology & Evolution, 2012, v. 29, n. 12, p. 3933, doi. 10.1093/molbev/mss198
By:
- Joseph, Sandeep J.;
- Didelot, Xavier;
- Rothschild, James;
- de Vries, Henry J.C.;
- Morré, Servaas A.;
- Read, Timothy D.;
- Dean, Deborah
Publication type:
Article
Global Emergence and Dissemination of Neisseria gonorrhoeae ST-9363 Isolates with Reduced Susceptibility to Azithromycin.
Published in:
Genome Biology & Evolution, 2022, v. 14, n. 1, p. 1, doi. 10.1093/gbe/evab287
By:
- Joseph, Sandeep J;
- Thomas, Jesse C;
- Schmerer, Matthew W;
- Cartee, John C;
- Cyr, Sancta St;
- Schlanger, Karen;
- Kersh, Ellen N;
- Raphael, Brian H;
- Gernert, Kim M;
- Group, Antimicrobial Resistant Neisseria gonorrhoeae Working
Publication type:
Article
Tetracycline Selective Pressure and Homologous Recombination Shape the Evolution of Chlamydia suis: A Recently Identified Zoonotic Pathogen.
Published in:
Genome Biology & Evolution, 2016, v. 8, n. 8, p. 2613, doi. 10.1093/gbe/evw182
By:
- Joseph, Sandeep J.;
- Marti, Hanna;
- Didelot, Xavier;
- Read, Timothy D.;
- Dean, Deborah
Publication type:
Article
Chlamydiaceae Genomics Reveals InterspeciesAdmixture and the Recent Evolution of Chlamydia abortus Infecting Lower Mammalian Species and Humans.
Published in:
Genome Biology & Evolution, 2015, v. 7, n. 11, p. 3070, doi. 10.1093/gbe/evv201
By:
- Joseph, Sandeep J.;
- Marti, Hanna;
- Didelot, Xavier;
- Castillo-Ramirez, Santiago;
- Read, Timothy D.;
- Dean, Deborah
Publication type:
Article
Draft sequencing and assembly of the genome of the world's largest fish, the whale shark: Rhincodon typus Smith 1828.
Published in:
BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3926-9
By:
- Read, Timothy D.;
- Petit III, Robert A.;
- Joseph, Sandeep J.;
- Alam, Md. Tauqeer;
- Weil, M. Ryan;
- Ahmad, Maida;
- Bhimani, Ravila;
- Vuong, Jocelyn S.;
- Haase, Chad P.;
- Webb, D. Harry;
- Tan, Milton;
- Dove, Alistair D. M.
Publication type:
Article
Fine-scale differentiation between Bacillus anthracis and Bacillus cereus group signatures in metagenome shotgun data.
Published in:
PeerJ, 2018, p. 1, doi. 10.7717/peerj.5515
By:
- Petit III, Robert A.;
- Hogan, James M.;
- Ezewudo, Matthew N.;
- Joseph, Sandeep J.;
- Read, Timothy D.
Publication type:
Article
Comparison of Two Output-Coding Strategies for Multi-Class Tumor Classification Using Gene Expression Data and Latent Variable Model as Binary Classifier.
Published in:
Cancer Informatics, 2010, n. 8, p. 39
By:
- Joseph, Sandeep J.;
- Robbins, Kelly R.;
- Wensheng Zhang;
- Rekaya, Romdhane
Publication type:
Article
Emergence of Localized Serogroup W Meningococcal Disease in the United States - Georgia, 2006-2016.
Published in:
2018
By:
- Moore, Ashley E.;
- MacNeil, Jessica R.;
- Xin Wang;
- Joseph, Sandeep J.;
- Lorentzson, Lauren;
- Thomas, Stepy;
- Tunali, Amy;
- Parrott, Tonia;
- Farley, Monica M.;
- Tobin-D'Angelo, Melissa;
- Wang, Xin
Publication type:
journal article
Whole genome sequencing for investigations of meningococcal outbreaks in the United States: a retrospective analysis.
Published in:
Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-33622-5
By:
- Whaley, Melissa J.;
- Joseph, Sandeep J.;
- Retchless, Adam C.;
- Kretz, Cecilia B.;
- Blain, Amy;
- Hu, Fang;
- Chang, How-Yi;
- Mbaeyi, Sarah A.;
- MacNeil, Jessica R.;
- Read, Timothy D.;
- Wang, Xin
Publication type:
Article
Genome-wide upstream motif analysis of Cryptosporidium parvum genes clustered by expression profile.
Published in:
BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-516
By:
- Oberstaller, Jenna;
- Joseph, Sandeep J.;
- Kissinger, Jessica C.
Publication type:
Article
The Alveolate Perkinsus marinus: Biological Insights from EST Gene Discovery.
Published in:
BMC Genomics, 2010, v. 11, p. 228, doi. 10.1186/1471-2164-11-228
By:
- Joseph, Sandeep J.;
- Fernández-Robledo, José A.;
- Gardner, Malcolm J.;
- El-Sayed, Najib M.;
- Chih-Horng Kuo;
- Schott, Eric J.;
- Wang, Haiming;
- Kissinger, Jessica C.;
- Vasta, Gerardo R.
Publication type:
Article
SNPxGE2: a database for human SNP–coexpression associations.
Published in:
Bioinformatics, 2012, v. 28, n. 3, p. 403, doi. 10.1093/bioinformatics/btr663
By:
- Wang, Yupeng;
- Joseph, Sandeep J.;
- Liu, Xinyu;
- Kelley, Michael;
- Rekaya, Romdhane
Publication type:
Article
Rapid detection and strain typing of Chlamydia trachomatis using a highly multiplexed microfluidic PCR assay.
Published in:
PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0178653
By:
- Turingan, Rosemary S.;
- Kaplun, Ludmila;
- Krautz-Peterson, Greice;
- Norsworthy, Sarah;
- Zolotova, Anna;
- Joseph, Sandeep J.;
- Read, Timothy D.;
- Dean, Deborah;
- Tan, Eugene;
- Selden, Richard F.
Publication type:
Article

Found: 28