Works by Jones, Kristine


Results: 57
    1
    2

    Addressing health disparities in Hispanic breast cancer: accurate and inexpensive sequencing of BRCA1 and BRCA2.

    Published in:
    GigaScience, 2015, v. 4, p. 1, doi. 10.1186/s13742-015-0088-z
    By:
    • Dean, Michael;
    • Boland, Joseph;
    • Yeager, Meredith;
    • Im, Kate M.;
    • Garland, Lisa;
    • Rodriguez-Herrera, Maria;
    • Perez, Mylen;
    • Mitchell, Jason;
    • Roberson, David;
    • Jones, Kristine;
    • Hyo Jung Lee;
    • Eggebeen, Rebecca;
    • Sawitzke, Julie;
    • Bass, Sara;
    • Xijun Zhang;
    • Robles, Vivian;
    • Hollis, Celia;
    • Barajas, Claudia;
    • Rath, Edna;
    • Arentz, Candy
    Publication type:
    Article
    3

    Genetic regulation of TERT splicing affects cancer risk by altering cellular longevity and replicative potential.

    Published in:
    Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56947-y
    By:
    • Florez-Vargas, Oscar;
    • Ho, Michelle;
    • Hogshead, Maxwell H.;
    • Papenberg, Brenen W.;
    • Lee, Chia-Han;
    • Forsythe, Kaitlin;
    • Jones, Kristine;
    • Luo, Wen;
    • Teshome, Kedest;
    • Blauwendraat, Cornelis;
    • Billingsley, Kimberly J.;
    • Kolmogorov, Mikhail;
    • Meredith, Melissa;
    • Paten, Benedict;
    • Chari, Raj;
    • Zhang, Chi;
    • Schneekloth, John S.;
    • Machiela, Mitchell J.;
    • Chanock, Stephen J.;
    • Gadalla, Shahinaz M.
    Publication type:
    Article
    4

    Oral microbial community composition is associated with pancreatic cancer: A case‐control study in Iran.

    Published in:
    Cancer Medicine, 2020, v. 9, n. 2, p. 797, doi. 10.1002/cam4.2660
    By:
    • Vogtmann, Emily;
    • Han, Yongli;
    • Caporaso, J. Gregory;
    • Bokulich, Nicholas;
    • Mohamadkhani, Ashraf;
    • Moayyedkazemi, Alireza;
    • Hua, Xing;
    • Kamangar, Farin;
    • Wan, Yunhu;
    • Suman, Shalabh;
    • Zhu, Bin;
    • Hutchinson, Amy;
    • Dagnall, Casey;
    • Jones, Kristine;
    • Hicks, Belynda;
    • Shi, Jianxin;
    • Malekzadeh, Reza;
    • Abnet, Christian C.;
    • Pourshams, Akram
    Publication type:
    Article
    5
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    Aflatoxin levels and prevalence of TP53 aflatoxin-mutations in hepatocellular carcinomas in Mexico.

    Published in:
    Salud Pública de México, 2022, v. 64, n. 1, p. 35, doi. 10.21149/13189
    By:
    • Lino-Silva, Leonardo S.;
    • Lajous, Martín;
    • Brochier, Marion;
    • Santiago-Ruiz, Luis;
    • Melchor-Ruan, Javier;
    • Yi Xie;
    • Mingyi Wang;
    • Dongjing Wu;
    • Higson, Herbert;
    • Jones, Kristine;
    • Romero-Martínez, Martin;
    • Villalpando, Salvador;
    • Mohar, Alejandro;
    • Smith, Joshua W.;
    • Alvarez, Christian S.;
    • McGlynn, Katherine A.;
    • Dean, Michael;
    • Groopman, John
    Publication type:
    Article
    7

    Sequencing of a rice centromere uncovers active genes.

    Published in:
    Nature Genetics, 2004, v. 36, n. 2, p. 138, doi. 10.1038/ng1289
    By:
    • Kiyotaka Nagaki, Kohtaroh;
    • Zhukuan Cheng;
    • Shu Ouyang;
    • Talbert, Paul B.;
    • Kim, Mary;
    • Jones, Kristine M.;
    • Henikoff, Steven;
    • Buell, C. Robin;
    • Jiming Jiang
    Publication type:
    Article
    8

    Genetic Modifiers of Neurofibromatosis Type 1-Associated Café-au-Lait Macule Count Identified Using Multi-platform Analysis.

    Published in:
    PLoS Genetics, 2014, v. 10, n. 10, p. 1, doi. 10.1371/journal.pgen.1004575
    By:
    • Pemov, Alexander;
    • Sung, Heejong;
    • Hyland, Paula L.;
    • Sloan, Jennifer L.;
    • Ruppert, Sarah L.;
    • Baldwin, Andrea M.;
    • Boland, Joseph F.;
    • Bass, Sara E.;
    • Lee, Hyo Jung;
    • Jones, Kristine M.;
    • Zhang, Xijun;
    • Mullikin, James C.;
    • Widemann, Brigitte C.;
    • Wilson, Alexander F.;
    • Stewart, Douglas R.
    Publication type:
    Article
    9
    10

    Life in Hot Carbon Monoxide: The Complete Genome Sequence of Carboxydothermus hydrogenoformans Z-2901.

    Published in:
    PLoS Genetics, 2005, v. 1, n. 5, p. 563, doi. 10.1371/journal.pgen.0010065
    By:
    • Wu, Martin;
    • Ren, Qinghu;
    • Durkin, A. Scott;
    • Daugherty, Sean C.;
    • Brinkac, Lauren M.;
    • Dodson, Robert J.;
    • Madupu, Ramana;
    • Sullivan, Steven A.;
    • Kolonay, James F.;
    • Nelson, William C.;
    • Tallon, Luke J.;
    • Jones, Kristine M.;
    • Ulrich, Luke E.;
    • Gonzalez, Juan M.;
    • Zhulin, Igor B.;
    • Robb, Frank T.;
    • Eisen, Jonathan A.;
    • Richardson, Paul M.
    Publication type:
    Article
    11

    Somatic Genomics and Clinical Features of Lung Adenocarcinoma: A Retrospective Study.

    Published in:
    2016
    By:
    • Shi, Jianxin;
    • Hua, Xing;
    • Zhu, Bin;
    • Ravichandran, Sarangan;
    • Wang, Mingyi;
    • Nguyen, Cu;
    • Brodie, Seth A.;
    • Palleschi, Alessandro;
    • Alloisio, Marco;
    • Pariscenti, Gianluca;
    • Jones, Kristine;
    • Zhou, Weiyin;
    • Bouk, Aaron J.;
    • Boland, Joseph;
    • Hicks, Belynda;
    • Risch, Adam;
    • Bennett, Hunter;
    • Luke, Brian T.;
    • Song, Lei;
    • Duan, Jubao
    Publication type:
    journal article
    12
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    The human oral microbiome and risk of colorectal cancer within three prospective cohort studies in the United States.

    Published in:
    Cancer (0008543X), 2025, v. 131, n. 6, p. 1, doi. 10.1002/cncr.35802
    By:
    • Vogtmann, Emily;
    • Yano, Yukiko;
    • Zouiouich, Semi;
    • Hua, Xing;
    • Wan, Yunhu;
    • Purandare, Vaishnavi;
    • Li, Shilan;
    • Dagnall, Casey L.;
    • Jones, Kristine;
    • Hicks, Belynda D.;
    • Hutchinson, Amy;
    • Caporaso, J. Gregory;
    • Wheeler, William;
    • Huang, Wen‐Yi;
    • Freedman, Neal D.;
    • Sandler, Dale P.;
    • Beane Freeman, Laura E.;
    • Liao, Linda M.;
    • Gail, Mitchell H.;
    • Shi, Jianxin
    Publication type:
    Article
    15
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    The Oral Microbiome and Lung Cancer Risk: An Analysis of 3 Prospective Cohort Studies.

    Published in:
    JNCI: Journal of the National Cancer Institute, 2022, v. 114, n. 11, p. 1501, doi. 10.1093/jnci/djac149
    By:
    • Vogtmann, Emily;
    • Hua, Xing;
    • Yu, Guoqin;
    • Purandare, Vaishnavi;
    • Hullings, Autumn G;
    • Shao, Dantong;
    • Wan, Yunhu;
    • Li, Shilan;
    • Dagnall, Casey L;
    • Jones, Kristine;
    • Hicks, Belynda D;
    • Hutchinson, Amy;
    • Caporaso, J Gregory;
    • Wheeler, William;
    • Sandler, Dale P;
    • Freeman, Laura E Beane;
    • Liao, Linda M;
    • Huang, Wen-Yi;
    • Freedman, Neal D;
    • Caporaso, Neil E
    Publication type:
    Article
    19

    Germline-somatic JAK2 interactions are associated with clonal expansion in myelofibrosis.

    Published in:
    Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32986-7
    By:
    • Brown, Derek W.;
    • Zhou, Weiyin;
    • Wang, Youjin;
    • Jones, Kristine;
    • Luo, Wen;
    • Dagnall, Casey;
    • Teshome, Kedest;
    • Klein, Alyssa;
    • Zhang, Tongwu;
    • Lin, Shu-Hong;
    • Lee, Olivia W.;
    • Khan, Sairah;
    • Vo, Jacqueline B.;
    • Hutchinson, Amy;
    • Liu, Jia;
    • Wang, Jiahui;
    • Zhu, Bin;
    • Hicks, Belynda;
    • Martin, Andrew St.;
    • Spellman, Stephen R.
    Publication type:
    Article
    20

    Prevalence and spectrum of germline rare variants in BRCA1/2 and PALB2 among breast cancer cases in Sarawak, Malaysia.

    Published in:
    Breast Cancer Research & Treatment, 2017, v. 165, n. 3, p. 687, doi. 10.1007/s10549-017-4356-8
    By:
    • Yang, Xiaohong;
    • Devi, Beena;
    • Sung, Hyuna;
    • Guida, Jennifer;
    • Mucaki, Eliseos;
    • Xiao, Yanzi;
    • Best, Ana;
    • Garland, Lisa;
    • Xie, Yi;
    • Hu, Nan;
    • Rodriguez-Herrera, Maria;
    • Wang, Chaoyu;
    • Jones, Kristine;
    • Luo, Wen;
    • Hicks, Belynda;
    • Tang, Tieng;
    • Moitra, Karobi;
    • Rogan, Peter;
    • Dean, Michael
    Publication type:
    Article
    21

    Genomic profiles and clinical presentation of chordoma.

    Published in:
    Acta Neuropathologica Communications, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40478-024-01833-9
    By:
    • Koka, Hela;
    • Zhou, Weiyin;
    • McMaster, Mary L.;
    • Bai, Jiwei;
    • Luo, Wen;
    • Klein, Alyssa;
    • Zhang, Tongwu;
    • Hua, Xing;
    • Li, Xin;
    • Wang, Difei;
    • Xiong, Yujia;
    • Jones, Kristine;
    • Vogt, Aurelie;
    • Hicks, Belynda;
    • Parry, Dilys;
    • Goldstein, Alisa M.;
    • Yang, Xiaohong R.
    Publication type:
    Article
    22
    23

    Distinguishing highly similar gene isoforms with a clustering-based bioinformatics analysis of PacBio single-molecule long reads.

    Published in:
    BioData Mining, 2016, v. 9, p. 1, doi. 10.1186/s13040-016-0090-8
    By:
    • Ma Liang;
    • Castle Raley;
    • Xin Zheng;
    • Geetha Kutty;
    • Gogineni, Emile;
    • Sherman, Brad T.;
    • Qiang Sun;
    • Xiongfong Chen;
    • Skelly, Thomas;
    • Jones, Kristine;
    • Stephens, Robert;
    • Bin Zhou;
    • Lau, William;
    • Johnson, Calvin;
    • Tomozumi Imamichi;
    • Minkang Jiang;
    • Robin Dewar;
    • Lempicki, Richard A.;
    • Bao Tran;
    • Kovacs, Joseph A.
    Publication type:
    Article
    24
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    Differential long-term bivalent HPV vaccine cross-protection by variants in the Costa Rica HPV vaccine trial.

    Published in:
    NPJ Vaccines, 2024, v. 9, n. 1, p. 1, doi. 10.1038/s41541-024-00896-y
    By:
    • Shing, Jaimie Z.;
    • Porras, Carolina;
    • Pinheiro, Maísa;
    • Herrero, Rolando;
    • Hildesheim, Allan;
    • Liu, Danping;
    • Gail, Mitchell H.;
    • Romero, Byron;
    • Schiller, John T.;
    • Zúñiga, Michael;
    • Mishra, Sambit;
    • Burdette, Laurie;
    • Jones, Kristine;
    • Schussler, John;
    • Ocampo, Rebeca;
    • Fang, Jianwen;
    • Liu, Zhiwei;
    • Lowy, Douglas R.;
    • Tsang, Sabrina H.;
    • Rodríguez, Ana Cecilia
    Publication type:
    Article
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    Rare Germline Variants in Chordoma-Related Genes and Chordoma Susceptibility.

    Published in:
    Cancers, 2021, v. 13, n. 11, p. 2704, doi. 10.3390/cancers13112704
    By:
    • Yepes, Sally;
    • Shah, Nirav N.;
    • Bai, Jiwei;
    • Koka, Hela;
    • Li, Chuzhong;
    • Gui, Songbai;
    • McMaster, Mary Lou;
    • Xiao, Yanzi;
    • Jones, Kristine;
    • Wang, Mingyi;
    • Vogt, Aurelie;
    • Zhu, Bin;
    • Hutchinson, Amy;
    • Yeager, Meredith;
    • Hicks, Belynda;
    • Carter, Brian;
    • Freedman, Neal D.;
    • Beane-Freeman, Laura;
    • Chanock, Stephen J.;
    • Zhang, Yazhuo
    Publication type:
    Article
    31
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    Evaluation of alcohol-free mouthwash for studies of the oral microbiome.

    Published in:
    PLoS ONE, 2023, v. 18, n. 4, p. 1, doi. 10.1371/journal.pone.0284956
    By:
    • Yano, Yukiko;
    • Vogtmann, Emily;
    • Shreves, Alaina H.;
    • Weinstein, Stephanie J.;
    • Black, Amanda;
    • Diaz-Mayoral, Norma;
    • Wan, Yunhu;
    • Zhou, Weiyin;
    • Hua, Xing;
    • Dagnall, Casey L.;
    • Hutchinson, Amy;
    • Jones, Kristine;
    • Hicks, Belynda D.;
    • Wyatt, Kathleen;
    • Brotzman, Michelle;
    • Gerlanc, Nicole;
    • Huang, Wen-Yi;
    • Albert, Paul S.;
    • Wentzensen, Nicolas;
    • Abnet, Christian C.
    Publication type:
    Article
    33
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    Germline mutations in <italic>Protection of Telomeres 1</italic> in two families with Hodgkin lymphoma.

    Published in:
    British Journal of Haematology, 2018, v. 181, n. 3, p. 372, doi. 10.1111/bjh.15203
    By:
    • McMaster, Mary L.;
    • Sun, Chongkui;
    • Landi, Maria  T.;
    • Savage, Sharon A.;
    • Rotunno, Melissa ;
    • Yang,  Xiaohong  R.;
    • Jones, Kristine;
    • Vogt,  Aurélie;
    • Hutchinson, Amy;
    • Zhu, Bin;
    • Wang, Mingyi;
    • Hicks, Belynda;
    • Thirunavukarason, Anand;
    • Stewart,  Douglas R.;
    • Koutros, Stella;
    • Goldstein, Alisa M.;
    • Chanock, Stephen J.;
    • Caporaso, Neil E.;
    • Tucker,  Margaret A.;
    • Goldin, Lynn R.
    Publication type:
    Article
    36
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    Using whole-exome sequencing and protein interaction networks to prioritize candidate genes for germline cutaneous melanoma susceptibility.

    Published in:
    Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-74293-5
    By:
    • Yepes, Sally;
    • Tucker, Margaret A.;
    • Koka, Hela;
    • Xiao, Yanzi;
    • Jones, Kristine;
    • Vogt, Aurelie;
    • Burdette, Laurie;
    • Luo, Wen;
    • Zhu, Bin;
    • Hutchinson, Amy;
    • Yeager, Meredith;
    • Hicks, Belynda;
    • Freedman, Neal D.;
    • Chanock, Stephen J.;
    • Goldstein, Alisa M.;
    • Yang, Xiaohong R.
    Publication type:
    Article
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    The oral microbiome and breast cancer and nonmalignant breast disease, and its relationship with the fecal microbiome in the Ghana Breast Health Study.

    Published in:
    International Journal of Cancer, 2022, v. 151, n. 8, p. 1248, doi. 10.1002/ijc.34145
    By:
    • Wu, Zeni;
    • Byrd, Doratha A.;
    • Wan, Yunhu;
    • Ansong, Daniel;
    • Clegg‐Lamptey, Joe‐Nat;
    • Wiafe‐Addai, Beatrice;
    • Edusei, Lawrence;
    • Adjei, Ernest;
    • Titiloye, Nicholas;
    • Dedey, Florence;
    • Aitpillah, Francis;
    • Oppong, Joseph;
    • Vanderpuye, Verna;
    • Osei‐Bonsu, Ernest;
    • Dagnall, Casey L.;
    • Jones, Kristine;
    • Hutchinson, Amy;
    • Hicks, Belynda D.;
    • Ahearn, Thomas U.;
    • Shi, Jianxin
    Publication type:
    Article
    41

    The genomic and epigenomic evolutionary history of papillary renal cell carcinomas.

    Published in:
    Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16546-5
    By:
    • Zhu, Bin;
    • Poeta, Maria Luana;
    • Costantini, Manuela;
    • Zhang, Tongwu;
    • Shi, Jianxin;
    • Sentinelli, Steno;
    • Zhao, Wei;
    • Pompeo, Vincenzo;
    • Cardelli, Maurizio;
    • Alexandrov, Boian S.;
    • Otlu, Burcak;
    • Hua, Xing;
    • Jones, Kristine;
    • Brodie, Seth;
    • Dabrowska, Malgorzata Ewa;
    • Toro, Jorge R.;
    • Yeager, Meredith;
    • Wang, Mingyi;
    • Hicks, Belynda;
    • Alexandrov, Ludmil B.
    Publication type:
    Article
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    Germline TP53 Variants and Susceptibility to Osteosarcoma.

    Published in:
    JNCI: Journal of the National Cancer Institute, 2015, v. 107, n. 7, p. 1, doi. 10.1093/jnci/djv101
    By:
    • Mirabello, Lisa;
    • Yeager, Meredith;
    • Mai, Phuong L.;
    • Gastier-Foster, Julie M.;
    • Gorlick, Richard;
    • Khanna, Chand;
    • Patiño-Garcia, Ana;
    • Sierrasesúmaga, Luis;
    • Lecanda, Fernando;
    • Andrulis, Irene L.;
    • Wunder, Jay S.;
    • Gokgoz, Nalan;
    • Barkauskas, Donald A.;
    • Zhang, Xijun;
    • Vogt, Aurelie;
    • Jones, Kristine;
    • Boland, Joseph F.;
    • Chanock, Stephen J.;
    • Savage, Sharon A.
    Publication type:
    Article
    45

    Germline TP53 variants and susceptibility to osteosarcoma.

    Published in:
    2015
    By:
    • Mirabello, Lisa;
    • Yeager, Meredith;
    • Mai, Phuong L;
    • Gastier-Foster, Julie M;
    • Gorlick, Richard;
    • Khanna, Chand;
    • Patiño-Garcia, Ana;
    • Sierrasesúmaga, Luis;
    • Lecanda, Fernando;
    • Andrulis, Irene L;
    • Wunder, Jay S;
    • Gokgoz, Nalan;
    • Barkauskas, Donald A;
    • Zhang, Xijun;
    • Vogt, Aurelie;
    • Jones, Kristine;
    • Boland, Joseph F;
    • Chanock, Stephen J;
    • Savage, Sharon A
    Publication type:
    journal article
    46

    Nonsense Mutations in the Shelterin Complex Genes ACD and TERF2IP in Familial Melanoma.

    Published in:
    JNCI: Journal of the National Cancer Institute, 2015, v. 107, n. 2, p. 1, doi. 10.1093/jnci/dju408
    By:
    • Aoude, Lauren G.;
    • Pritchard, Antonia L.;
    • Robles-Espinoza, Carla Daniela;
    • Wadt, Karin;
    • Harland, Mark;
    • Choi, Jiyeon;
    • Gartside, Michael;
    • Quesada, Víctor;
    • Johansson, Peter;
    • Palmer, Jane M.;
    • Ramsay, Andrew J.;
    • Zhang, Xijun;
    • Jones, Kristine;
    • Symmons, Judith;
    • Holland, Elizabeth A.;
    • Schmid, Helen;
    • Bonazzi, Vanessa;
    • Woods, Susan;
    • Dutton-Regester, Ken;
    • Stark, Mitchell S.
    Publication type:
    Article
    47

    Nonsense mutations in the shelterin complex genes ACD and TERF2IP in familial melanoma.

    Published in:
    2015
    By:
    • Aoude, Lauren G;
    • Pritchard, Antonia L;
    • Robles-Espinoza, Carla Daniela;
    • Wadt, Karin;
    • Harland, Mark;
    • Choi, Jiyeon;
    • Gartside, Michael;
    • Quesada, Víctor;
    • Johansson, Peter;
    • Palmer, Jane M;
    • Ramsay, Andrew J;
    • Zhang, Xijun;
    • Jones, Kristine;
    • Symmons, Judith;
    • Holland, Elizabeth A;
    • Schmid, Helen;
    • Bonazzi, Vanessa;
    • Woods, Susan;
    • Dutton-Regester, Ken;
    • Stark, Mitchell S
    Publication type:
    journal article
    48

    Low mutation burden and frequent loss of CDKN2A/B and SMARCA2, but not PRC2, define premalignant neurofibromatosis type 1–associated atypical neurofibromas.

    Published in:
    Neuro-Oncology, 2019, v. 21, n. 8, p. 981, doi. 10.1093/neuonc/noz028
    By:
    • Pemov, Alexander;
    • Hansen, Nancy F;
    • Sindiri, Sivasish;
    • Patidar, Rajesh;
    • Higham, Christine S;
    • Dombi, Eva;
    • Miettinen, Markku M;
    • Fetsch, Patricia;
    • Brems, Hilde;
    • Chandrasekharappa, Settara C;
    • Jones, Kristine;
    • Zhu, Bin;
    • Wei, Jun S;
    • Program, National Intramural Sequencing Center (NISC) Comparative Sequencing;
    • Laboratory, National Cancer Institute (NCI) Division of Cancer Epidemiology and Genetics (DCEG) Cancer Genomics Research;
    • Mullikin, James C;
    • Wallace, Margaret R;
    • Khan, Javed;
    • Legius, Eric;
    • Widemann, Brigitte C
    Publication type:
    Article
    49
    50

    Rare germline variants in PALB2 and BRCA2 in familial and sporadic chordoma.

    Published in:
    Human Mutation, 2022, v. 43, n. 10, p. 1396, doi. 10.1002/humu.24427
    By:
    • Xia, Bing;
    • Biswas, Kajal;
    • Foo, Tzeh K.;
    • Gomes, Thiago T.;
    • Riedel‐Topper, Maximilian;
    • Southon, Eileen;
    • Kang, Zhihua;
    • Huo, Yanying;
    • Reid, Susan;
    • Stauffer, Stacey;
    • Zhou, Weiyin;
    • Zhu, Bin;
    • Koka, Hela;
    • Yepes, Sally;
    • Brodie, Seth A.;
    • Jones, Kristine;
    • Vogt, Aurelie;
    • Carter, Brian;
    • Freedman, Neal D.;
    • Hicks, Belynda
    Publication type:
    Article