Works by Jolley, Keith A.


Results: 66
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    Targeted metagenomics reveals association between severity and pathogen co-detection in infants with respiratory syncytial virus.

    Published in:
    Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46648-3
    By:
    • Lin, Gu-Lung;
    • Drysdale, Simon B.;
    • Snape, Matthew D.;
    • O'Connor, Daniel;
    • Brown, Anthony;
    • MacIntyre-Cockett, George;
    • Mellado-Gomez, Esther;
    • de Cesare, Mariateresa;
    • Ansari, M. Azim;
    • Bonsall, David;
    • Bray, James E.;
    • Jolley, Keith A.;
    • Bowden, Rory;
    • Aerssens, Jeroen;
    • Bont, Louis;
    • Openshaw, Peter J. M.;
    • Martinon-Torres, Federico;
    • Nair, Harish;
    • Golubchik, Tanya;
    • Pollard, Andrew J.
    Publication type:
    Article
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    Genomic epidemiology of Campylobacter jejuni associated with asymptomatic pediatric infection in the Peruvian Amazon.

    Published in:
    PLoS Neglected Tropical Diseases, 2020, v. 14, n. 8, p. 1, doi. 10.1371/journal.pntd.0008533
    By:
    • Pascoe, Ben;
    • Schiaffino, Francesca;
    • Murray, Susan;
    • Méric, Guillaume;
    • Bayliss, Sion C.;
    • Hitchings, Matthew D.;
    • Mourkas, Evangelos;
    • Calland, Jessica K.;
    • Burga, Rosa;
    • Yori, Pablo Peñataro;
    • Jolley, Keith A.;
    • Cooper, Kerry K.;
    • Parker, Craig T.;
    • Olortegui, Maribel Paredes;
    • Kosek, Margaret N.;
    • Sheppard, Samuel K.
    Publication type:
    Article
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    Recombinational Switching of the Clostridium difficile S-Layer and a Novel Glycosylation Gene Cluster Revealed by Large-Scale Whole-Genome Sequencing.

    Published in:
    Journal of Infectious Diseases, 2013, v. 207, n. 4, p. 675, doi. 10.1093/infdis/jis734
    By:
    • Dingle, Kate E.;
    • Didelot, Xavier;
    • Ansari, M. Azim;
    • Eyre, David W.;
    • Vaughan, Alison;
    • Griffiths, David;
    • Ip, Camilla L. C.;
    • Batty, Elizabeth M.;
    • Golubchik, Tanya;
    • Bowden, Rory;
    • Jolley, Keith A.;
    • Hood, Derek W.;
    • Fawley, Warren N.;
    • Walker, A. Sarah;
    • Peto, Timothy E.;
    • Wilcox, Mark H.;
    • Crook, Derrick W.
    Publication type:
    Article
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    Changes in Serogroup and Genotype Prevalence Among Carried Meningococci in the United Kingdom During Vaccine Implementation.

    Published in:
    Journal of Infectious Diseases, 2011, v. 204, n. 7, p. 1046, doi. 10.1093/infdis/jir466
    By:
    • Ibarz-Pavón, Ana Belén;
    • MacLennan, Jenny;
    • Andrews, Nicholas J.;
    • Gray, Stephen J.;
    • Urwin, Rachel;
    • Clarke, Stuart C.;
    • Walker, A. Mark;
    • Evans, Meirion R.;
    • Kroll, J. Simon;
    • Neal, Keith R.;
    • Ala'Aldeen, Dlawer;
    • Crook, Derrick W.;
    • Cann, Kathryn;
    • Harrison, Sarah;
    • Cunningham, Richard;
    • Baxter, David;
    • Kaczmarski, Edward;
    • McCarthy, Noel D.;
    • Jolley, Keith A.;
    • Cameron, J. Claire
    Publication type:
    Article
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    MLST revisited: the gene-by-gene approach to bacterial genomics.

    Published in:
    Nature Reviews Microbiology, 2013, v. 11, n. 10, p. 728, doi. 10.1038/nrmicro3093
    By:
    • Maiden, Martin C. J.;
    • van Rensburg, Melissa J. Jansen;
    • Bray, James E.;
    • Earle, Sarah G.;
    • Ford, Suzanne A.;
    • Jolley, Keith A.;
    • McCarthy, Noel D.
    Publication type:
    Article
    8

    Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter.

    Published in:
    eLife, 2022, p. 1, doi. 10.7554/eLife.73552
    By:
    • Mourkas, Evangelos;
    • Koji Yahara;
    • Bayliss, Sion C.;
    • Calland, Jessica K.;
    • Johansson, Håkan;
    • Mageiros, Leonardos;
    • Muñoz-Ramirez, Zilia Y.;
    • Futcher, Grant;
    • Méric, Guillaume;
    • Hitchings, Matthew D.;
    • Sandoval-Motta, Santiago;
    • Torres, Javier;
    • Jolley, Keith A.;
    • Maiden, Martin C. J.;
    • Ellström, Patrik;
    • Waldenström, Jonas;
    • Pascoe, Ben;
    • Sheppard, Samuel K.
    Publication type:
    Article
    9

    Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus.

    Published in:
    Genome Biology & Evolution, 2017, v. 9, n. 4, p. 830, doi. 10.1093/gbe/evx037
    By:
    • Murray, Susan;
    • Pascoe, Ben;
    • Méric, Guillaume;
    • Mageiros, Leonardos;
    • Koji Yahara;
    • Hitchings, Matthew D.;
    • Friedmann, Yasmin;
    • Wilkinson, Thomas S.;
    • Gormley, Fraser J.;
    • Mack, Dietrich;
    • Bray, James E.;
    • Lamble, Sarah;
    • Bowden, Rory;
    • Jolley, Keith A.;
    • Maiden, Martin C. J.;
    • Wendlandt, Sarah;
    • Schwarz, Stefan;
    • Corander, Jukka;
    • Fitzgerald, J. Ross;
    • Sheppard, Samuel K.
    Publication type:
    Article
    10

    Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis.

    Published in:
    Genome Biology & Evolution, 2015, v. 7, n. 5, p. 1313, doi. 10.1093/gbe/evv066
    By:
    • Méric, Guillaume;
    • Miragaia, Maria;
    • de Been, Mark;
    • Koji Yahara;
    • Pascoe, Ben;
    • Mageiros, Leonardos;
    • Mikhail, Jane;
    • Harris, Llinos G.;
    • Wilkinson, Thomas S.;
    • Rolo, Joana;
    • Lamble, Sarah;
    • Bray, James E.;
    • Jolley, Keith A.;
    • Hanage, William P.;
    • Bowden, Rory;
    • Maiden, Martin C. J.;
    • Mack, Dietrich;
    • de Lencastre, Hermínia;
    • Feil, Edward J.;
    • Corander, Jukka
    Publication type:
    Article
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    Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

    Published in:
    PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0151240
    By:
    • Harris, Llinos G.;
    • Murray, Susan;
    • Pascoe, Ben;
    • Bray, James;
    • Meric, Guillaume;
    • Magerios, Leonardos;
    • Wilkinson, Thomas S.;
    • Jeeves, Rose;
    • Rohde, Holger;
    • Schwarz, Stefan;
    • de Lencastre, Herminia;
    • Miragaia, Maria;
    • Rolo, Joana;
    • Bowden, Rory;
    • Jolley, Keith A.;
    • Maiden, Martin C. J.;
    • Mack, Dietrich;
    • Sheppard, Samuel K.
    Publication type:
    Article
    18

    DESCRIPTION AND NOMENCLATURE OF NEISSERIA MENINGITIDIS CAPSULE LOCUS.

    Published in:
    Romanian Journal of Infectious Diseases / Revista Romana de de Boli Infectioase, 2013, v. 16, n. 2, p. 64
    By:
    • Harrison, Odile B.;
    • Claus, Heike;
    • Jiang, Ying;
    • Bennett, Julia S.;
    • Bratcher, Holly B.;
    • Jolley, Keith A.;
    • Corton, Craig;
    • Care, Rory;
    • Poolman, Jan T.;
    • Zollinger, Wendell D.;
    • Frasch, Carl E.;
    • Stephens, David S.;
    • Feavers, Ian;
    • Frosch, Matthias;
    • Parkhill, Julian;
    • Vogel, Ulrich;
    • Quail, Michael A.;
    • Bentley, Stephen D.;
    • Maiden, Martin C. J.
    Publication type:
    Article
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    Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.

    Published in:
    Molecular Ecology, 2017, v. 26, n. 17, p. 4497, doi. 10.1111/mec.14176
    By:
    • Pascoe, Ben;
    • Méric, Guillaume;
    • Yahara, Koji;
    • Wimalarathna, Helen;
    • Murray, Susan;
    • Hitchings, Matthew D.;
    • Sproston, Emma L.;
    • Carrillo, Catherine D.;
    • Taboada, Eduardo N.;
    • Cooper, Kerry K.;
    • Huynh, Steven;
    • Cody, Alison J.;
    • Jolley, Keith A.;
    • Maiden, Martin C. J.;
    • McCarthy, Noel D.;
    • Didelot, Xavier;
    • Parker, Craig T.;
    • Sheppard, Samuel K.
    Publication type:
    Article
    31

    Cryptic ecology among host generalist Campylobacter jejuni in domestic animals.

    Published in:
    Molecular Ecology, 2014, v. 23, n. 10, p. 2442, doi. 10.1111/mec.12742
    By:
    • Sheppard, Samuel K.;
    • Cheng, Lu;
    • Méric, Guillaume;
    • Haan, Caroline P. A.;
    • Llarena, Ann‐Katrin;
    • Marttinen, Pekka;
    • Vidal, Ana;
    • Ridley, Anne;
    • Clifton‐Hadley, Felicity;
    • Connor, Thomas R.;
    • Strachan, Norval J. C.;
    • Forbes, Ken;
    • Colles, Frances M.;
    • Jolley, Keith A.;
    • Bentley, Stephen D.;
    • Maiden, Martin C. J.;
    • Hänninen, Marja‐Liisa;
    • Parkhill, Julian;
    • Hanage, William P.;
    • Corander, Jukka
    Publication type:
    Article
    32

    Progressive genome-wide introgression in agricultural Campylobacter coli.

    Published in:
    Molecular Ecology, 2013, v. 22, n. 4, p. 1051, doi. 10.1111/mec.12162
    By:
    • Sheppard, Samuel K.;
    • Didelot, Xavier;
    • Jolley, Keith A.;
    • Darling, Aaron E.;
    • Pascoe, Ben;
    • Meric, Guillaume;
    • Kelly, David J.;
    • Cody, Alison;
    • Colles, Frances M.;
    • Strachan, Norval J. C.;
    • Ogden, Iain D.;
    • Forbes, Ken;
    • French, Nigel P.;
    • Carter, Philip;
    • Miller, William G.;
    • McCarthy, Noel D.;
    • Owen, Robert;
    • Litrup, Eva;
    • Egholm, Michael;
    • Affourtit, Jason P.
    Publication type:
    Article
    33

    Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis.

    Published in:
    Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07368-7
    By:
    • Méric, Guillaume;
    • Mageiros, Leonardos;
    • Pensar, Johan;
    • Laabei, Maisem;
    • Yahara, Koji;
    • Pascoe, Ben;
    • Kittiwan, Nattinee;
    • Tadee, Phacharaporn;
    • Post, Virginia;
    • Lamble, Sarah;
    • Bowden, Rory;
    • Bray, James E.;
    • Morgenstern, Mario;
    • Jolley, Keith A.;
    • Maiden, Martin C. J.;
    • Feil, Edward J.;
    • Didelot, Xavier;
    • Miragaia, Maria;
    • de Lencastre, Herminia;
    • Moriarty, T. Fintan
    Publication type:
    Article
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    Genome-wide association of functional traits linked with C ampylobacter jejuni survival from farm to fork.

    Published in:
    Environmental Microbiology, 2017, v. 19, n. 1, p. 361, doi. 10.1111/1462-2920.13628
    By:
    • Yahara, Koji;
    • Méric, Guillaume;
    • Taylor, Aidan J.;
    • de Vries, Stefan P. W.;
    • Murray, Susan;
    • Pascoe, Ben;
    • Mageiros, Leonardos;
    • Torralbo, Alicia;
    • Vidal, Ana;
    • Ridley, Anne;
    • Komukai, Sho;
    • Wimalarathna, Helen;
    • Cody, Alison J.;
    • Colles, Frances M.;
    • McCarthy, Noel;
    • Harris, David;
    • Bray, James E.;
    • Jolley, Keith A.;
    • Maiden, Martin C. J.;
    • Bentley, Stephen D.
    Publication type:
    Article
    39

    Population structure of the Yersinia pseudotuberculosis complex according to multilocus sequence typing.

    Published in:
    Environmental Microbiology, 2011, v. 13, n. 12, p. 3114, doi. 10.1111/j.1462-2920.2011.02588.x
    By:
    • Laukkanen-Ninios, Riikka;
    • Didelot, Xavier;
    • Jolley, Keith A.;
    • Morelli, Giovanna;
    • Sangal, Vartul;
    • Kristo, Paula;
    • Brehony, Carina;
    • Imori, Priscilla F. M.;
    • Fukushima, Hiroshi;
    • Siitonen, Anja;
    • Tseneva, Galina;
    • Voskressenskaya, Ekaterina;
    • Falcao, Juliana P.;
    • Korkeala, Hannu;
    • Maiden, Martin C. J.;
    • Mazzoni, Camila;
    • Carniel, Elisabeth;
    • Skurnik, Mikael;
    • Achtman, Mark
    Publication type:
    Article
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    Genomic Analyses of >3,100 Nasopharyngeal Pneumococci Revealed Significant Differences Between Pneumococci Recovered in Four Different Geographical Regions.

    Published in:
    Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.00317
    By:
    • van Tonder, Andries J.;
    • Bray, James E.;
    • Jolley, Keith A.;
    • Jansen van Rensburg, Melissa;
    • Quirk, Sigríður J.;
    • Haraldsson, Gunnsteinn;
    • Maiden, Martin C. J.;
    • Bentley, Stephen D.;
    • Haraldsson, Ásgeir;
    • Erlendsdóttir, Helga;
    • Kristinsson, Karl G.;
    • Brueggemann, Angela B.
    Publication type:
    Article
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    Genomic Evidence for the Evolution of Streptococcus equi: Host Restriction, Increased Virulence, and Genetic Exchange with Human Pathogens.

    Published in:
    PLoS Pathogens, 2009, v. 5, n. 3, p. 1, doi. 10.1371/journal.ppat.1000346
    By:
    • Holden, Matthew T. G.;
    • Heather, Zoe;
    • Paillot, Romain;
    • Steward, Karen F.;
    • Webb, Katy;
    • Ainslie, Fern;
    • Jourdan, Thibaud;
    • Bason, Nathalie C.;
    • Holroyd, Nancy E.;
    • Mungall, Karen;
    • Quail, Michael A.;
    • Sanders, Mandy;
    • Simmonds, Mark;
    • Willey, David;
    • Brooks, Karen;
    • Aanensen, David M.;
    • Spratt, Brian G.;
    • Jolley, Keith A.;
    • Maiden, Martin C. J.;
    • Kehoe, Michael
    Publication type:
    Article
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    Description and Nomenclature of Neisseria meningitidis Capsule Locus.

    Published in:
    Emerging Infectious Diseases, 2013, v. 19, n. 4, p. 566, doi. 10.3201/eid1904.111799
    By:
    • Harrison, Odile B.;
    • Claus, Heike;
    • Jiang, Ying;
    • Bennett, Julia S.;
    • Bratcher, Holly B.;
    • Jolley, Keith A.;
    • Corton, Craig;
    • Care, Rory;
    • Poolman, Jan T.;
    • Zollinger, Wendell D.;
    • Frasch, Carl E.;
    • Stephens, David S.;
    • Feavers, Ian;
    • Frosch, Matthias;
    • Parkhill, Julian;
    • Vogel, Ulrich;
    • Quail, Michael A.;
    • Bentley, Stephen D.;
    • Maiden, Martin C. J.
    Publication type:
    Article