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Significance analysis and statistical dissection of variably methylated regions.
- Published in:
- Biostatistics, 2012, v. 13, n. 1, p. 166, doi. 10.1093/biostatistics/kxr013
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- Publication type:
- Article
F104. GENE CO-EXPRESSION NETWORKS REVEAL PATHWAYS OF CONVERGENCE OF SCHIZOPHRENIA RISK GENES AND OF RESPONSE TO TREATMENT.
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- Schizophrenia Bulletin, 2019, v. 45, p. S293, doi. 10.1093/schbul/sbz018.516
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- Publication type:
- Article
Early developmental exposure to air pollution increases the risk of Alzheimers disease and amyloid production: Studies in mouse and Caenorhabditis elegans: Molecular and cell biology/APP/Abeta/amyloid.
- Published in:
- Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2020, v. 16, n. 11, p. 1, doi. 10.1002/alz.043846
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- Publication type:
- Article
Expression of ZNF804A in human brain and alterations in schizophrenia, bipolar disorder, and major depressive disorder: a novel transcript fetally regulated by the psychosis risk variant rs1344706.
- Published in:
- 2014
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- Publication type:
- journal article
Expression of ZNF804A in Human Brain and Alterations in Schizophrenia, Bipolar Disorder, and Major Depressive Disorder.
- Published in:
- JAMA Psychiatry, 2014, v. 71, n. 10, p. 1112, doi. 10.1001/jamapsychiatry.2014.1079
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- Publication type:
- Article
Adult mouse hippocampal transcriptome changes associated with long-term behavioral and metabolic effects of gestational air pollution toxicity.
- Published in:
- Translational Psychiatry, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41398-020-00907-1
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- Publication type:
- Article
Cannabinoid receptor CNR1 expression and DNA methylation in human prefrontal cortex, hippocampus and caudate in brain development and schizophrenia.
- Published in:
- Translational Psychiatry, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41398-020-0832-8
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- Publication type:
- Article
Flexible expressed region analysis for RNA-seq with derfinder.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. 2, p. 1, doi. 10.1093/nar/gkw852
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- Publication type:
- Article
Genome-wide sequencing-based identification of methylation quantitative trait loci and their role in schizophrenia risk.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25517-3
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- Publication type:
- Article
Reproducible RNA-seq analysis using recount2.
- Published in:
- Nature Biotechnology, 2017, v. 35, n. 4, p. 319, doi. 10.1038/nbt.3838
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- Publication type:
- Article
Ballgown bridges the gap between transcriptome assembly and expression analysis.
- Published in:
- Nature Biotechnology, 2015, v. 33, n. 3, p. 243, doi. 10.1038/nbt.3172
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- Publication type:
- Article
C1q/TNF-Related Protein-9 (CTRP9) Levels Are Associated With Obesity and Decrease Following Weight Loss Surgery.
- Published in:
- 2016
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- Publication type:
- journal article
TrkB-dependent regulation of molecular signaling across septal cell types.
- Published in:
- Translational Psychiatry, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41398-024-02758-6
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- Publication type:
- Article
Schizophrenia-Associated hERG channel Kv11.1-3.1 Exhibits a Unique Trafficking Deficit that is Rescued Through Proteasome Inhibition for High Throughput Screening.
- Published in:
- Scientific Reports, 2016, p. 19976, doi. 10.1038/srep19976
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- Publication type:
- Article
Non-coding Class Switch Recombination-Related Transcription in Human Normal and Pathological Immune Responses.
- Published in:
- Frontiers in Immunology, 2018, p. N.PAG, doi. 10.3389/fimmu.2018.02679
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- Publication type:
- Article
recount3: summaries and queries for large-scale RNA-seq expression and splicing.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02533-6
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- Publication type:
- Article
Use of Postmortem Human Dura Mater and Scalp for Deriving Human Fibroblast Cultures.
- Published in:
- PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0045282
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- Publication type:
- Article
Genetic risk mechanisms of posttraumatic stress disorder in the human brain.
- Published in:
- Journal of Neuroscience Research, 2018, v. 96, n. 1, p. 21, doi. 10.1002/jnr.23957
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- Publication type:
- Article
BiocMAP: a Bioconductor-friendly, GPU-accelerated pipeline for bisulfite-sequencing data.
- Published in:
- BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-023-05461-3
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- Publication type:
- Article
Cerebral cortex and blood transcriptome changes in mouse neonates prenatally exposed to air pollution particulate matter.
- Published in:
- Journal of Neurodevelopmental Disorders, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s11689-021-09380-3
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- Publication type:
- Article
Practical impacts of genomic data "cleaning" on biological discovery using surrogate variable analysis.
- Published in:
- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/s12859-015-0808-5
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- Publication type:
- Article
Gene set bagging for estimating the probability a statistically significant result will replicate.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-360
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- Publication type:
- Article
Curating the Evidence About COVID-19 for Frontline Public Health and Clinical Care: The Novel Coronavirus Research Compendium.
- Published in:
- Public Health Reports, 2022, v. 137, n. 2, p. 197, doi. 10.1177/00333549211058732
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- Publication type:
- Article
VistoSeg: Processing utilities for high-resolution images for spatially resolved transcriptomics data.
- Published in:
- Biological Imaging, 2023, v. 3, p. 1, doi. 10.1017/S2633903X23000235
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- Publication type:
- Article
African-American and Caucasian participation in postmortem human brain donation for neuropsychiatric research.
- Published in:
- PLoS ONE, 2019, v. 14, n. 10, p. 1, doi. 10.1371/journal.pone.0222565
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- Publication type:
- Article
DNA methylation age of blood predicts all-cause mortality in later life.
- Published in:
- Genome Biology, 2015, v. 16, n. 1, p. 345, doi. 10.1186/s13059-015-0584-6
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- Publication type:
- Article
Accounting for cellular heterogeneity is critical in epigenome-wide association studies.
- Published in:
- Genome Biology, 2014, v. 15, n. 1, p. 1, doi. 10.1186/gb-2014-15-2-r31
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- Publication type:
- Article
SUFI: an automated approach to spectral unmixing of fluorescent multiplex images captured in mouse and post-mortem human brain tissues.
- Published in:
- BMC Neuroscience, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12868-022-00765-1
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- Publication type:
- Article
CaPTure: Calcium PeakToolbox for analysis of in vitro calcium imaging data.
- Published in:
- 2022
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- Publication type:
- journal article
Hypermetabolism in mice carrying a near-complete human chromosome 21.
- Published in:
- eLife, 2023, p. 1, doi. 10.7554/eLife.86023
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- Publication type:
- Article
Integrated DNA methylation and gene expression profiling across multiple brain regions implicate novel genes in Alzheimer's disease.
- Published in:
- Acta Neuropathologica, 2019, v. 137, n. 4, p. 557, doi. 10.1007/s00401-019-01966-5
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- Publication type:
- Article
Developmental regulation of human cortex transcription and its clinical relevance at single base resolution.
- Published in:
- Nature Neuroscience, 2015, v. 18, n. 1, p. 154, doi. 10.1038/nn.3898
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- Publication type:
- Article
dotdotdot: an automated approach to quantify multiplex single molecule fluorescent in situ hybridization (smFISH) images in complex tissues.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. 11, p. e66, doi. 10.1093/nar/gkaa312
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- Publication type:
- Article
Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1118-6
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- Publication type:
- Article
Cytokine, Chemokine, and Cytokine Receptor Changes Are Associated With Metabolic Improvements After Bariatric Surgery.
- Published in:
- Journal of Clinical Endocrinology & Metabolism, 2019, v. 104, n. 3, p. 947, doi. 10.1210/jc.2018-02245
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- Publication type:
- Article
Cytokine, Chemokine, and Cytokine Receptor Changes Are Associated With Metabolic Improvements After Bariatric Surgery.
- Published in:
- 2018
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- Publication type:
- journal article
Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods.
- Published in:
- BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-5870-3
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- Publication type:
- Article
Prenatal mercury concentration is associated with changes in DNA methylation at TCEANC2 in newborns.
- Published in:
- 2015
- By:
- Publication type:
- journal article
Paternal sperm DNA methylation associated with early signs of autism risk in an autism-enriched cohort.
- Published in:
- 2015
- By:
- Publication type:
- journal article
DNA methylation shows genome-wide association of NFIX, RAPGEF2 and MSRB3 with gestational age at birth.
- Published in:
- International Journal of Epidemiology, 2012, v. 41, n. 1, p. 188, doi. 10.1093/ije/dyr237
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- Publication type:
- Article
Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies.
- Published in:
- International Journal of Epidemiology, 2012, v. 41, n. 1, p. 200, doi. 10.1093/ije/dyr238
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- Publication type:
- Article
DNA Methylation Profiling of Human Prefrontal Cortex Neurons in Heroin Users Shows Significant Difference between Genomic Contexts of Hyper- and Hypomethylation and a Younger Epigenetic Age.
- Published in:
- Genes, 2017, v. 8, n. 6, p. 152, doi. 10.3390/genes8060152
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- Publication type:
- Article
Divergent neuronal DNA methylation patterns across human cortical development reveal critical periods and a unique role of CpH methylation.
- Published in:
- Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1805-1
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- Publication type:
- Article
Addressing confounding artifacts in reconstruction of gene co-expression networks.
- Published in:
- Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1700-9
- By:
- Publication type:
- Article
Genetic and epigenetic analysis of schizophrenia in blood-a no-brainer?
- Published in:
- 2016
- By:
- Publication type:
- Opinion
Comparison of quantitative trait loci methods: Total expression and allelic imbalance method in brain RNA-seq.
- Published in:
- PLoS ONE, 2019, v. 14, n. 6, p. 1, doi. 10.1371/journal.pone.0217765
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- Publication type:
- Article
TE-array-a high throughput tool to study transposon transcription.
- Published in:
- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-869
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- Publication type:
- Article
A Bayesian framework for multiple trait colocalization from summary association statistics.
- Published in:
- Bioinformatics, 2018, v. 34, n. 15, p. 2538, doi. 10.1093/bioinformatics/bty147
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- Publication type:
- Article
Rail-RNA: scalable analysis of RNA-seq splicing and coverage.
- Published in:
- Bioinformatics, 2017, v. 33, n. 24, p. 4033, doi. 10.1093/bioinformatics/btw575
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- Publication type:
- Article
Polyester: simulating RNA-seq datasets with differential transcript expression.
- Published in:
- Bioinformatics, 2015, v. 31, n. 17, p. 2778, doi. 10.1093/bioinformatics/btv272
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- Publication type:
- Article