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Searching for molecular hypoxia sensors among oxygen-dependent enzymes.
- Published in:
- eLife, 2023, p. 1, doi. 10.7554/eLife.87705
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- Publication type:
- Article
Correction: Mutations in α-synuclein, TDP-43 and tau prolong protein half-life through diminished degradation by lysosomal proteases.
- Published in:
- 2023
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- Publication type:
- Correction Notice
Mutations in α-synuclein, TDP-43 and tau prolong protein half-life through diminished degradation by lysosomal proteases.
- Published in:
- Molecular Neurodegeneration, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s13024-023-00621-8
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- Publication type:
- Article
Protomer alignment modulates specificity of RNA substrate recognition by Ire1.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.67425
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- Publication type:
- Article
The synthesis and structural requirements for measuring glucocorticoid receptor expression in vivo with (±)-<sup>11</sup>C-YJH08 PET.
- Published in:
- Journal of Nuclear Medicine, 2020, v. 61, n. 12, p. 1, doi. 10.2967/jnumed.120.249755
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- Publication type:
- Article
The synthesis and structural requirements for measuring glucocorticoid receptor expression in vivo with (±)-<sup>11</sup>C-YJH08 PET.
- Published in:
- Journal of Nuclear Medicine, 2020, v. 61, n. 11, p. 1, doi. 10.2967/jnumed.120.249755
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- Publication type:
- Article
The synthesis and structural requirements for measuring glucocorticoid receptor expression in vivo with (±)-<sup>11</sup>C-YJH08 PET.
- Published in:
- Journal of Nuclear Medicine, 2020, v. 61, n. 10, p. 1, doi. 10.2967/jnumed.120.249755
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- Publication type:
- Article
Age- and stress-associated C. elegans granulins impair lysosomal function and induce a compensatory HLH-30/TFEB transcriptional response.
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- PLoS Genetics, 2019, v. 15, n. 8, p. 1, doi. 10.1371/journal.pgen.1008295
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- Publication type:
- Article
Structure‐based Discovery of Novel CK2α‐Binding Cyclic Peptides with Anti‐cancer Activity.
- Published in:
- Molecular Informatics, 2019, v. 38, n. 3, p. N.PAG, doi. 10.1002/minf.201800089
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- Publication type:
- Article
Inhibitor binding mode and allosteric regulation of Na<sup>+</sup>-glucose symporters.
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- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07700-1
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- Publication type:
- Article
Prediction of enzymatic pathways by integrative pathway mapping.
- Published in:
- eLife, 2018, p. 1, doi. 10.7554/eLife.31097
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- Publication type:
- Article
Cancer-associated arginine-to-histidine mutations confer a gain in pH sensing to mutant proteins.
- Published in:
- Science Signaling, 2017, v. 10, n. 495, p. 1, doi. 10.1126/scisignal.aam9931
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- Publication type:
- Article
Prominent features of the amino acid mutation landscape in cancer.
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- PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0183273
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- Publication type:
- Article
Defining the Product Chemical Space of Monoterpenoid Synthases.
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- PLoS Computational Biology, 2016, v. 12, n. 8, p. 1, doi. 10.1371/journal.pcbi.1005053
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- Publication type:
- Article
Disulfide-Trapping Identifies a New, Effective Chemical Probe for Activating the Nuclear Receptor Human LRH-1 (NR5A2).
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- PLoS ONE, 2016, v. 11, n. 7, p. 1, doi. 10.1371/journal.pone.0159316
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- Publication type:
- Article
Non-degradative Ubiquitination of Protein Kinases.
- Published in:
- PLoS Computational Biology, 2016, v. 12, n. 6, p. 1, doi. 10.1371/journal.pcbi.1004898
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- Publication type:
- Article
Structure-Bioactivity Relationship for Benzimidazole Thiophene Inhibitors of Polo-Like Kinase 1 (PLK1), a Potential Drug Target in Schistosoma mansoni.
- Published in:
- PLoS Neglected Tropical Diseases, 2016, v. 10, n. 1, p. 1, doi. 10.1371/journal.pntd.0004356
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- Publication type:
- Article
Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 10, p. 1, doi. 10.1371/journal.pcbi.1003874
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- Publication type:
- Article
A New Coarse-Grained Model for E. coli Cytoplasm: Accurate Calculation of the Diffusion Coefficient of Proteins and Observation of Anomalous Diffusion.
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- PLoS ONE, 2014, v. 9, n. 9, p. 1, doi. 10.1371/journal.pone.0106466
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- Publication type:
- Article
A High Throughput Screen Identifies Potent and Selective Inhibitors to Human Epithelial 15-Lipoxygenase-2.
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- PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0104094
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- Publication type:
- Article
A Structure-Based Model for Predicting Serum Albumin Binding.
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- PLoS ONE, 2014, v. 9, n. 4, p. 1, doi. 10.1371/journal.pone.0093323
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- Publication type:
- Article
The Free Energy Profile of Tubulin Straight-Bent Conformational Changes, with Implications for Microtubule Assembly and Drug Discovery.
- Published in:
- PLoS Computational Biology, 2014, v. 10, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003464
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- Publication type:
- Article
Discovery of new enzymes and metabolic pathways by using structure and genome context.
- Published in:
- Nature, 2013, v. 502, n. 7473, p. 698, doi. 10.1038/nature12576
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- Publication type:
- Article
Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function.
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- Nature, 2013, v. 498, n. 7452, p. 123, doi. 10.1038/nature12180
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- Publication type:
- Article
2-Aminothiazoles with Improved Pharmacotherapeutic Properties for Treatment of Prion Disease.
- Published in:
- ChemMedChem, 2013, v. 8, n. 5, p. 847, doi. 10.1002/cmdc.201300007
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- Publication type:
- Article
Computer-aided antibody design.
- Published in:
- PEDS: Protein Engineering, Design & Selection, 2012, v. 25, n. 10, p. 507, doi. 10.1093/protein/gzs024
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- Publication type:
- Article
Investigation of the Proteolytic Functions of an Expanded Cercarial Elastase Gene Family in Schistosoma mansoni.
- Published in:
- PLoS Neglected Tropical Diseases, 2012, v. 6, n. 4, p. 1, doi. 10.1371/journal.pntd.0001589
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- Publication type:
- Article
Investigation of the Proteolytic Functions of an Expanded Cercarial Elastase Gene Family in Schistosoma mansoni.
- Published in:
- PLoS Neglected Tropical Diseases, 2012, v. 6, n. 4, p. 1, doi. 10.1371/journal.pntd.0001589
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- Publication type:
- Article
On-resin N-methylation of cyclic peptides for discovery of orally bioavailable scaffolds.
- Published in:
- Nature Chemical Biology, 2011, v. 7, n. 11, p. 810, doi. 10.1038/nchembio.664
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- Publication type:
- Article
Phosphorylation of the Arp2 Subunit Relieves Autoinhibitory Interactions for Arp2/3 Complex Activation.
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- PLoS Computational Biology, 2011, v. 7, n. 11, p. 1, doi. 10.1371/journal.pcbi.1002226
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- Publication type:
- Article
Assessment of protein structure refinement in CASP9.
- Published in:
- Proteins, 2011, v. 79, p. 74, doi. 10.1002/prot.23131
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- Publication type:
- Article
Dysregulated pH: a perfect storm for cancer progression.
- Published in:
- 2011
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- Publication type:
- research
A New View of the Bacterial Cytosol Environment.
- Published in:
- PLoS Computational Biology, 2011, v. 7, n. 6, p. 1, doi. 10.1371/journal.pcbi.1002066
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- Publication type:
- Article
Predicting Binding to P-Glycoprotein by Flexible Receptor Docking.
- Published in:
- PLoS Computational Biology, 2011, v. 7, n. 6, p. 1, doi. 10.1371/journal.pcbi.1002083
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- Publication type:
- Article
Effects of somatic mutations on CDR loop flexibility during affinity maturation.
- Published in:
- Proteins, 2011, v. 79, n. 3, p. 821, doi. 10.1002/prot.22920
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- Publication type:
- Article
Modeling Conformational Ensembles of Slow Functional Motions in Pin1-WW.
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- PLoS Computational Biology, 2010, v. 6, n. 12, p. 1, doi. 10.1371/journal.pcbi.1001015
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- Publication type:
- Article
Antibodies as a model system for comparative model refinement.
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- Proteins, 2010, v. 78, n. 11, p. 2490, doi. 10.1002/prot.22757
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- Publication type:
- Article
Structural Characterization of CYP51 from Trypanosoma cruzi and Trypanosoma brucei Bound to the Antifungal Drugs Posaconazole and Fluconazole.
- Published in:
- PLoS Neglected Tropical Diseases, 2010, v. 4, n. 4, p. 1, doi. 10.1371/journal.pntd.0000651
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- Publication type:
- Article
Structural Characterization of CYP51 from Trypanosoma cruzi and Trypanosoma brucei Bound to the Antifungal Drugs Posaconazole and Fluconazole.
- Published in:
- PLoS Neglected Tropical Diseases, 2010, v. 4, n. 4, p. 1, doi. 10.1371/journal.pntd.0000651
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- Publication type:
- Article
Binding-Site Assessment by Virtual Fragment Screening.
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- PLoS ONE, 2010, v. 5, n. 4, p. 1, doi. 10.1371/journal.pone.0010109
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- Publication type:
- Article
Automated site preparation in physics-based rescoring of receptor ligand complexes.
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- Proteins, 2009, v. 77, n. 1, p. 52, doi. 10.1002/prot.22415
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- Publication type:
- Article
Assessment of the protein-structure refinement category in CASP8.
- Published in:
- Proteins, 2009, v. 77, n. S9, p. 66, doi. 10.1002/prot.22538
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- Publication type:
- Article
Cofilin is a pH sensor for actin free barbed end formation: role of phosphoinositide binding.
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- Journal of Cell Biology, 2008, v. 183, n. 5, p. 865, doi. 10.1083/jcb.200804161
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- Publication type:
- Article
Toward better refinement of comparative models: Predicting loops in inexact environments.
- Published in:
- Proteins, 2008, v. 72, n. 3, p. 959, doi. 10.1002/prot.21990
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- Publication type:
- Article
Conformational selection in silico: Loop latching motions and ligand binding in enzymes.
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- Proteins, 2008, v. 71, n. 1, p. 153, doi. 10.1002/prot.21666
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- Publication type:
- Article
An atomistic model of passive membrane permeability: application to a series of FDA approved drugs.
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- Journal of Computer-Aided Molecular Design, 2007, v. 21, n. 12, p. 675, doi. 10.1007/s10822-007-9141-z
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- Publication type:
- Article
Prediction and assignment of function for a divergent N-succinyl amino acid racemase.
- Published in:
- Nature Chemical Biology, 2007, v. 3, n. 8, p. 486, doi. 10.1038/nchembio.2007.11
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- Publication type:
- Article
Prediction of side-chain conformations on protein surfaces.
- Published in:
- Proteins, 2007, v. 66, n. 4, p. 814, doi. 10.1002/prot.21099
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- Publication type:
- Article
Assignment of polar states for protein amino acid residues using an interaction cluster decomposition algorithm and its application to high resolution protein structure modeling.
- Published in:
- Proteins, 2007, v. 66, n. 4, p. 824, doi. 10.1002/prot.21125
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- Publication type:
- Article
Methods in Molecular Biology, Vol. 316: Bioinformatics and Drug Discovery . Edited by Richard S. Larson.
- Published in:
- ChemMedChem, 2006, v. 1, n. 6, p. 654, doi. 10.1002/cmdc.200600035
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- Publication type:
- Article