Works by Istace, Benjamin

Results: 20

Dynamics of X chromosome hyper-expression and inactivation in male tissues during stick insect development.
Published in:
PLoS Genetics, 2025, v. 21, n. 3, p. 1, doi. 10.1371/journal.pgen.1011615
By:
- Djordjevic, Jelisaveta;
- Tran Van, Patrick;
- Toubiana, William;
- Labédan, Marjorie;
- Dumas, Zoé;
- Aury, Jean-Marc;
- Cruaud, Corinne;
- Istace, Benjamin;
- Labadie, Karine;
- Noel, Benjamin;
- Parker, Darren J.;
- Schwander, Tanja
Publication type:
Article
On the way to diploidization and unexpected ploidy in the grass Sporobolus section Spartina mesopolyploids.
Published in:
Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56983-8
By:
- Salmon, Armel;
- Hao, Yan;
- Milin, Morgane;
- Lima, Oscar;
- Cavé-Radet, Armand;
- Giraud, Delphine;
- Cruaud, Corinne;
- Labadie, Karine;
- Istace, Benjamin;
- Belser, Caroline;
- Aury, Jean-Marc;
- Wincker, Patrick;
- Li, Bo;
- Li, Lin-Feng;
- Ainouche, Malika
Publication type:
Article
Unravelling genomic drivers of speciation in Musa through genome assemblies of wild banana ancestors.
Published in:
Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56329-4
By:
- Martin, Guillaume;
- Istace, Benjamin;
- Baurens, Franc-Christophe;
- Belser, Caroline;
- Hervouet, Catherine;
- Labadie, Karine;
- Cruaud, Corinne;
- Noel, Benjamin;
- Guiougou, Chantal;
- Salmon, Frederic;
- Mahadeo, Joël;
- Ahmad, Fajarudin;
- Volkaert, Hugo A.;
- Droc, Gaëtan;
- Rouard, Mathieu;
- Sardos, Julie;
- Wincker, Patrick;
- Yahiaoui, Nabila;
- Aury, Jean-Marc;
- D'Hont, Angélique
Publication type:
Article
Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data.
Published in:
Briefings in Bioinformatics, 2020, v. 21, n. 4, p. 1164, doi. 10.1093/bib/bbz058
By:
- Lima, Leandro;
- Marchet, Camille;
- Caboche, Ségolène;
- Silva, Corinne Da;
- Istace, Benjamin;
- Aury, Jean-Marc;
- Touzet, Hélène;
- Chikhi, Rayan
Publication type:
Article
Sequencing and Chromosome-Scale Assembly of Plant Genomes, Brassica rapa as a Use Case.
Published in:
Biology (2079-7737), 2021, v. 10, n. 8, p. 732, doi. 10.3390/biology10080732
By:
- Istace, Benjamin;
- Belser, Caroline;
- Falentin, Cyril;
- Labadie, Karine;
- Boideau, Franz;
- Deniot, Gwenaëlle;
- Maillet, Loeiz;
- Cruaud, Corinne;
- Bertrand, Laurie;
- Chèvre, Anne-Marie;
- Wincker, Patrick;
- Rousseau-Gueutin, Mathieu;
- Aury, Jean-Marc
Publication type:
Article
Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence.
Published in:
Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03939-z
By:
- Guérin, Nina;
- Ciccarella, Marta;
- Flamant, Elisa;
- Frémont, Paul;
- Mangenot, Sophie;
- Istace, Benjamin;
- Noel, Benjamin;
- Belser, Caroline;
- Bertrand, Laurie;
- Labadie, Karine;
- Cruaud, Corinne;
- Romac, Sarah;
- Bachy, Charles;
- Gachenot, Martin;
- Pelletier, Eric;
- Alberti, Adriana;
- Jaillon, Olivier;
- Wincker, Patrick;
- Aury, Jean-Marc;
- Carradec, Quentin
Publication type:
Article
De Novo Assembly of a New Solanum pennellii Accession Using Nanopore Sequencing.
Published in:
Plant Cell, 2017, v. 29, n. 10, p. 2336, doi. 10.1105/tpc.17.00521
By:
- Schmidt, Maximilian H.-W.;
- Vogel, Alexander;
- Denton, Alisandra K.;
- Istace, Benjamin;
- Wormit, Alexandra;
- van de Geest, Henri;
- Bolger, Marie E.;
- Alseekh, Saleh;
- Maß, Janina;
- Pfaff, Christian;
- Schurr, Ulrich;
- Chetelat, Roger;
- Maumus, Florian;
- Aury, Jean-Marc;
- Koren, Sergey;
- Fernie, Alisdair R.;
- Zamir, Dani;
- Bolger, Anthony M.;
- Usadel, Björn
Publication type:
Article
Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding.
Published in:
GigaScience, 2022, v. 11, p. 1, doi. 10.1093/gigascience/giac034
By:
- Aury, Jean-Marc;
- Engelen, Stefan;
- Istace, Benjamin;
- Monat, Cécile;
- Lasserre-Zuber, Pauline;
- Belser, Caroline;
- Cruaud, Corinne;
- Rimbert, Hélène;
- Leroy, Philippe;
- Arribat, Sandrine;
- Dufau, Isabelle;
- Bellec, Arnaud;
- Grimbichler, David;
- Papon, Nathan;
- Paux, Etienne;
- Ranoux, Marion;
- Alberti, Adriana;
- Wincker, Patrick;
- Choulet, Frédéric
Publication type:
Article
Long-read assembly of the Brassica napus reference genome Darmor-bzh.
Published in:
GigaScience, 2020, v. 9, n. 12, p. 1, doi. 10.1093/gigascience/giaa137
By:
- Rousseau-Gueutin, Mathieu;
- Belser, Caroline;
- Da Silva, Corinne;
- Richard, Gautier;
- Istace, Benjamin;
- Cruaud, Corinne;
- Falentin, Cyril;
- Boideau, Franz;
- Boutte, Julien;
- Delourme, Regine;
- Deniot, Gwenaëlle;
- Engelen, Stefan;
- de Carvalho, Julie Ferreira;
- Lemainque, Arnaud;
- Maillet, Loeiz;
- Morice, Jérôme;
- Wincker, Patrick;
- Denoeud, France;
- Chèvre, Anne-Marie;
- Aury, Jean-Marc
Publication type:
Article
de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.
Published in:
GigaScience, 2017, v. 6, n. 2, p. 1, doi. 10.1093/gigascience/giw018
By:
- Istace, Benjamin;
- Friedrich, Anne;
- d'Agata, Léo;
- Faye, Sébastien;
- Payen, Emilie;
- Beluche, Odette;
- Caradec, Claudia;
- Davidas, Sabrina;
- Cruaud, Corinne;
- Liti, Gianni;
- Lemainque, Arnaud;
- Engelen, Stefan;
- Wincker, Patrick;
- Schacherer, Joseph;
- Aury, Jean-Marc
Publication type:
Article
Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variation detection.
Published in:
BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08499-4
By:
- Canaguier, Aurélie;
- Guilbaud, Romane;
- Denis, Erwan;
- Magdelenat, Ghislaine;
- Belser, Caroline;
- Istace, Benjamin;
- Cruaud, Corinne;
- Wincker, Patrick;
- Le Paslier, Marie-Christine;
- Faivre-Rampant, Patricia;
- Barbe, Valérie
Publication type:
Article
Genome sequences of four Ixodes species expands understanding of tick evolution.
Published in:
BMC Biology, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12915-025-02121-1
By:
- Cerqueira de Araujo, Alexandra;
- Noel, Benjamin;
- Bretaudeau, Anthony;
- Labadie, Karine;
- Boudet, Matéo;
- Tadrent, Nachida;
- Istace, Benjamin;
- Kritli, Salima;
- Cruaud, Corinne;
- Olaso, Robert;
- Deleuze, Jean-François;
- Voordouw, Maarten J.;
- Hervet, Caroline;
- Plantard, Olivier;
- Zamoto-Niikura, Aya;
- Chertemps, Thomas;
- Maïbèche, Martine;
- Hilliou, Frédérique;
- Le Goff, Gaëlle;
- Chmelař, Jindřich
Publication type:
Article
Two large reciprocal translocations characterized in the disease resistance-rich burmannica genetic group of Musa acuminata.
Published in:
Annals of Botany, 2019, v. 124, n. 2, p. 319, doi. 10.1093/aob/mcz078
By:
- Dupouy, Marion;
- Baurens, Franc-Christophe;
- Derouault, Paco;
- Hervouet, Catherine;
- Cardi, Céline;
- Cruaud, Corinne;
- Istace, Benjamin;
- Labadie, Karine;
- Guiougou, Chantal;
- Toubi, Lyonel;
- Salmon, Frederic;
- Mournet, Pierre;
- Rouard, Mathieu;
- Yahiaoui, Nabila;
- Lemainque, Arnaud;
- Martin, Guillaume;
- D'Hont, Angélique
Publication type:
Article
Author Correction to: Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.
Published in:
2021
By:
- Farhat, Sarah;
- Le, Phuong;
- Kayal, Ehsan;
- Noel, Benjamin;
- Bigeard, Estelle;
- Corre, Erwan;
- Maumus, Florian;
- Florent, Isabelle;
- Alberti, Adriana;
- Aury, Jean-Marc;
- Barbeyron, Tristan;
- Cai, Ruibo;
- Da Silva, Corinne;
- Istace, Benjamin;
- Labadie, Karine;
- Marie, Dominique;
- Mercier, Jonathan;
- Rukwavu, Tsinda;
- Szymczak, Jeremy;
- Tonon, Thierry
Publication type:
Correction Notice
Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.
Published in:
BMC Biology, 2021, v. 19, n. 1, p. 1, doi. 10.1186/s12915-020-00927-9
By:
- Farhat, Sarah;
- Le, Phuong;
- Kayal, Ehsan;
- Noel, Benjamin;
- Bigeard, Estelle;
- Corre, Erwan;
- Maumus, Florian;
- Florent, Isabelle;
- Alberti, Adriana;
- Aury, Jean-Marc;
- Barbeyron, Tristan;
- Cai, Ruibo;
- Da Silva, Corinne;
- Istace, Benjamin;
- Labadie, Karine;
- Marie, Dominique;
- Mercier, Jonathan;
- Rukwavu, Tsinda;
- Szymczak, Jeremy;
- Tonon, Thierry
Publication type:
Article
Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.
Published in:
BMC Biology, 2021, v. 19, n. 1, p. 1, doi. 10.1186/s12915-020-00927-9
By:
- Farhat, Sarah;
- Le, Phuong;
- Kayal, Ehsan;
- Noel, Benjamin;
- Bigeard, Estelle;
- Corre, Erwan;
- Maumus, Florian;
- Florent, Isabelle;
- Alberti, Adriana;
- Aury, Jean-Marc;
- Barbeyron, Tristan;
- Cai, Ruibo;
- Da Silva, Corinne;
- Istace, Benjamin;
- Labadie, Karine;
- Marie, Dominique;
- Mercier, Jonathan;
- Rukwavu, Tsinda;
- Szymczak, Jeremy;
- Tonon, Thierry
Publication type:
Article
Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing.
Published in:
Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02559-3
By:
- Belser, Caroline;
- Baurens, Franc-Christophe;
- Noel, Benjamin;
- Martin, Guillaume;
- Cruaud, Corinne;
- Istace, Benjamin;
- Yahiaoui, Nabila;
- Labadie, Karine;
- Hřibová, Eva;
- Doležel, Jaroslav;
- Lemainque, Arnaud;
- Wincker, Patrick;
- D'Hont, Angélique;
- Aury, Jean-Marc
Publication type:
Article
LocoGSE, a sequence-based genome size estimator for plants.
Published in:
Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2022.1001499
By:
- Guenzi-Tiberi, Pierre;
- Istace, Benjamin;
- Alsos, Inger Greve;
- Coissac, Eric;
- Lavergne, Sébastien;
- Aury, Jean-Marc;
- Denoeud, France
Publication type:
Article
LocoGSE, a sequence-based genome size estimator for plants.
Published in:
Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1328966
By:
- Guenzi-Tiberi, Pierre;
- Istace, Benjamin;
- Alsos, Inger Greve;
- Coissac, Eric;
- Lavergne, Sébastien;
- Aury, Jean-Marc;
- Denoeud, France
Publication type:
Article
Population genomics of apricots unravels domestication history and adaptive events.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-24283-6
By:
- Groppi, Alexis;
- Liu, Shuo;
- Cornille, Amandine;
- Decroocq, Stéphane;
- Bui, Quynh Trang;
- Tricon, David;
- Cruaud, Corinne;
- Arribat, Sandrine;
- Belser, Caroline;
- Marande, William;
- Salse, Jérôme;
- Huneau, Cécile;
- Rodde, Nathalie;
- Rhalloussi, Wassim;
- Cauet, Stéphane;
- Istace, Benjamin;
- Denis, Erwan;
- Carrère, Sébastien;
- Audergon, Jean-Marc;
- Roch, Guillaume
Publication type:
Article