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Subunits of E. coli RNA polymerase in function and structure.
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- Journal of Cellular Physiology, 1969, v. 74, p. 223, doi. 10.1002/jcp.1040740423
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- Article
Repression of deoP2 in Escherichia coli by CytR: conversion of a transcription activator into a repressor.
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- EMBO Journal, 2001, v. 20, n. 19, p. 5392, doi. 10.1093/emboj/20.19.5392
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Conservation of sigma-core RNA polymerase proximity relationships between the enhancer-independent and enhancer-dependent sigma classes.
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- EMBO Journal, 2000, v. 19, n. 12, p. 3038, doi. 10.1093/emboj/19.12.3038
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Positioning of s<sup>S</sup>, the stationary phase s factor, in Escherichia coli RNA polymerase-promoter open complexes.
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- EMBO Journal, 1999, v. 18, n. 14, p. 4049, doi. 10.1093/emboj/18.14.4049
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Active recruitment of σ<sup>54</sup>-RNA polymerase to the Pu promoter of Pseudomonas putida: role of IHF and αCTD.
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- EMBO Journal, 1998, v. 17, n. 17, p. 5120, doi. 10.1093/emboj/17.17.5120
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Metal-Responsive Transcription Factors Co-Regulate Anti-Sigma Factor (Rsd) and Ribosome Dimerization Factor Expression.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 5, p. 4717, doi. 10.3390/ijms24054717
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Genomic SELEX Reveals Pervasive Role of the Flagella Master Regulator FlhDC in Carbon Metabolism.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 4, p. 3696, doi. 10.3390/ijms24043696
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Transcription Factor SrsR (YgfI) Is a Novel Regulator for the Stress-Response Genes in Stationary Phase in Escherichia coli K-12.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 11, p. 6055, doi. 10.3390/ijms23116055
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Genome-Wide Identification, Comparison, and Expression Analysis of Transcription Factors in Ascidian Styela clava.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 9, p. 4317, doi. 10.3390/ijms22094317
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Cytotoxic Mechanism of Excess Polyamines Functions through Translational Repression of Specific Proteins Encoded by Polyamine Modulon.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 7, p. 2406, doi. 10.3390/ijms21072406
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RodZ regulates the post-transcriptional processing of the Shigella sonnei type III secretion system.
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- EMBO Reports, 2011, v. 12, n. 9, p. 911, doi. 10.1038/embor.2011.132
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- Article
ALS-linked TDP-43 mutations interfere with the recruitment of RNA recognition motifs to G-quadruplex RNA.
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- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-33172-5
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TDP-43 binds and transports G-quadruplex-containing m RNAs into neurites for local translation.
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- Genes to Cells, 2016, v. 21, n. 5, p. 466, doi. 10.1111/gtc.12352
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Expanded roles of two-component response regulator OmpR in Escherichia coli: genomic SELEX search for novel regulation targets.
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- Genes to Cells, 2015, v. 20, n. 11, p. 915, doi. 10.1111/gtc.12282
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- Article
Cross talk in promoter recognition between six NarL-family response regulators of Escherichia coli two-component system.
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- Genes to Cells, 2015, v. 20, n. 7, p. 1, doi. 10.1111/gtc.12251
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Roles of cell division control factor SdiA: recognition of quorum sensing signals and modulation of transcription regulation targets.
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- Genes to Cells, 2014, v. 19, n. 5, p. 405, doi. 10.1111/gtc.12139
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Novel regulator Pgr R for switch control of peptidoglycan recycling in Escherichia coli.
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- Genes to Cells, 2013, v. 18, n. 2, p. 123, doi. 10.1111/gtc.12026
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Single-target regulators form a minor group of transcription factors in Escherichia coli K-12.
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- Nucleic Acids Research, 2018, v. 46, n. 8, p. 3921, doi. 10.1093/nar/gky138
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Transcription profile of Escherichia coli: genomic SELEX search for regulatory targets of transcription factors.
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- Nucleic Acids Research, 2016, v. 44, n. 5, p. 2058, doi. 10.1093/nar/gkw051
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The nucleoid-associated protein Dan organizes chromosomal DNA through rigid nucleoprotein filament formation in E. coli during anoxia.
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- Nucleic Acids Research, 2013, v. 41, n. 2, p. 746, doi. 10.1093/nar/gks1126
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A novel nucleoid protein of Escherichia coli induced under anaerobiotic growth conditions.
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- Nucleic Acids Research, 2010, v. 38, n. 11, p. 3605, doi. 10.1093/nar/gkq077
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The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions.
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- Nucleic Acids Research, 2008, v. 36, n. 12, p. 3950, doi. 10.1093/nar/gkn339
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Growth phase dependent changes in the structure and protein composition of nucleoid in Escherichia coli.
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- SCIENCE CHINA Life Sciences, 2015, v. 58, n. 9, p. 902, doi. 10.1007/s11427-015-4898-0
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- Article
Novel roles of LeuO in transcription regulation of E. coli genome: antagonistic interplay with the universal silencer H-NS.
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- Molecular Microbiology, 2011, v. 82, n. 2, p. 378, doi. 10.1111/j.1365-2958.2011.07818.x
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RutR is the uracil/thymine-sensing master regulator of a set of genes for synthesis and degradation of pyrimidines.
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- Molecular Microbiology, 2007, v. 66, n. 3, p. 744, doi. 10.1111/j.1365-2958.2007.05954.x
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Transcriptional response ofEscherichia colito external copper.
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- Molecular Microbiology, 2005, v. 56, n. 1, p. 215, doi. 10.1111/j.1365-2958.2005.04532.x
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Mode of action of the TyrR protein: repression and activation of the tyrP promoter of Escherichia coli.
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- Molecular Microbiology, 2004, v. 52, n. 1, p. 243, doi. 10.1111/j.1365-2958.2003.03965.x
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Two different modes of transcription repression of the Escherichia coli acetate operon by IclR.
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- Molecular Microbiology, 2003, v. 47, n. 1, p. 183, doi. 10.1046/j.1365-2958.2003.03287.x
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Novel mode of transcription regulation of divergently overlapping promoters by PhoP, the regulator of two-component system sensing external magnesium availability.
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- Molecular Microbiology, 2002, v. 45, n. 2, p. 423, doi. 10.1046/j.1365-2958.2002.03017.x
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Fractionation of Escherichia coli cell populations at different stages during growth transition to stationary phase.
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- Molecular Microbiology, 2002, v. 43, n. 2, p. 269, doi. 10.1046/j.1365-2958.2002.02746.x
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Novel mode of transcription regulation by SdiA, an Escherichia coli homologue of the quorum-sensing regulator.
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- Molecular Microbiology, 2001, v. 41, n. 5, p. 1187, doi. 10.1046/j.1365-2958.2001.02585.x
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- Article
Three Members of Polyamine Modulon under Oxidative Stress Conditions: Two Transcription Factors (SoxR and EmrR) and a Glutathione Synthetic Enzyme (GshA).
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- PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0124883
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Characterization of the YdeO Regulon in Escherichia coli.
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- PLoS ONE, 2014, v. 9, n. 11, p. 1, doi. 10.1371/journal.pone.0111962
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The Whole Set of Constitutive Promoters Recognized by RNA Polymerase RpoD Holoenzyme of <i>Escherichia coli</i>.
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- PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0090447
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Novel Roles of cAMP Receptor Protein (CRP) in Regulation of Transport and Metabolism of Carbon Sources.
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- PLoS ONE, 2011, v. 6, n. 6, p. 1, doi. 10.1371/journal.pone.0020081
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Specific fluorescent labeling of two functional domains in RNA polymerase α subunit.
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- Proteins, 1998, v. 30, n. 2, p. 183, doi. 10.1002/(SICI)1097-0134(19980201)30:2<183::AID-PROT8>3.0.CO;2-O
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- Article
Single live-bacterial cell assay of promoter activity and regulation J Teramoto et al. Single-cell assay of promoter regulation.
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- Genes to Cells, 2010, v. 15, n. 11, p. 1111, doi. 10.1111/j.1365-2443.2010.01449.x
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- Article
Host factor Ebp1: Selective inhibitor of influenza virus transcriptase.
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- Genes to Cells, 2007, v. 12, n. 2, p. 133, doi. 10.1111/j.1365-2443.2007.01047.x
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Systematic search for the Cra-binding promoters using genomic SELEX system.
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- Genes to Cells, 2005, v. 10, n. 9, p. 907, doi. 10.1111/j.1365-2443.2005.00888.x
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Studies ofSchizosaccharomyces pombeTFIIE indicate conformational and functional changes in RNA polymerase II at transcription initiation.
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- Genes to Cells, 2005, v. 10, n. 3, p. 207, doi. 10.1111/j.1365-2443.2005.00833.x
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- Article
The interaction between σ<sup>S</sup> , the stationary phase σ factor, and the core enzyme of Escherichia coli RNA polymerase.
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- Genes to Cells, 2002, v. 7, n. 3, p. 233, doi. 10.1046/j.1365-2443.2002.00517.x
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Level of the RNA polymerase II in the fission yeast stays constant but phosphorylation of its carboxyl terminal domain varies depending on the phase and rate of cell growth.
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- Genes to Cells, 2002, v. 7, n. 3, p. 273, doi. 10.1046/j.1365-2443.2002.00522.x
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Transcription organization and mRNA levels of the genes for all 12 subunits of the fission yeast RNA polymerase II.
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- Genes to Cells, 2001, v. 6, n. 1, p. 25, doi. 10.1046/j.1365-2443.2001.00394.x
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Two types of localization of the DNA-binding proteins within the Escherichia coli nucleoid.
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- Genes to Cells, 2000, v. 5, n. 8, p. 613, doi. 10.1046/j.1365-2443.2000.00350.x
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Two separate sequences of PB2 subunit constitute the RNA cap-binding site of influenza virus RNA polymerase.
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- Genes to Cells, 1999, v. 4, n. 8, p. 475, doi. 10.1046/j.1365-2443.1999.00275.x
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Modulation of the nucleoid, the transcription apparatus, and the translation machinery in bacteria for stationary phase survival.
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- Genes to Cells, 1999, v. 4, n. 3, p. 135, doi. 10.1046/j.1365-2443.1999.00247.x
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The mediator for stringent control, ppGpp, binds to the β-subunit of Escherichia coli RNA polymerase.
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- Genes to Cells, 1998, v. 3, n. 5, p. 279, doi. 10.1046/j.1365-2443.1998.00190.x
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Functional interaction of Escherichia coli RNA polymerase with inorganic polyphosphate.
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- Genes to Cells, 1997, v. 2, n. 7, p. 433, doi. 10.1046/j.1365-2443.1997.13203301320330.x
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Molecular assembly of RNA polymerase II from the fission yeast Schizosaccharomyces pombe: subunit-subunit contact network involving Rpb5.
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- Genes to Cells, 1996, v. 1, n. 9, p. 843, doi. 10.1046/j.1365-2443.1996.730274.x
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Molecular anatomy of the β′ subunit of the E. coli RNA polymerase: identification of regions involved in polymerase assembly.
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- Genes to Cells, 1996, v. 1, n. 9, p. 819, doi. 10.1046/j.1365-2443.1996.700269.x
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- Article