Works by Ischenko, Dmitry

Results: 13
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    RNA-Seq gene expression profiling of HepG2 cells: the influence of experimental factors and comparison with liver tissue.

    Published in:
    BMC Genomics, 2014, v. 15, n. 1, p. 1459, doi. 10.1186/1471-2164-15-1108
    By:
    • Tyakht, Alexander V.;
    • Ilina, Elena N.;
    • Alexeev, Dmitry G.;
    • Ischenko, Dmitry S.;
    • Gorbachev, Alexey Y.;
    • Semashko, Tatiana A.;
    • Larin, Andrei K.;
    • Selezneva, Oksana V.;
    • Kostryukova, Elena S.;
    • Karalkin, Pavel A.;
    • Vakhrushev, Igor V.;
    • Kurbatov, Leonid K.;
    • Archakov, Alexander I.;
    • Govorun, Vadim M.
    Publication type:
    Article
    5

    Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology.

    Published in:
    BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-308
    By:
    • Chernyaeva, Ekaterina N.;
    • Shulgina, Marina V.;
    • Rotkevich, Mikhail S.;
    • Dobrynin, Pavel V.;
    • Simonov, Serguei A.;
    • Shitikov, Egor A.;
    • Ischenko, Dmitry S.;
    • Karpova, Irina Y.;
    • Kostryukova, Elena S.;
    • Ilina, Elena N.;
    • Govorun, Vadim M.;
    • Zhuravlev, Vyacheslav Y.;
    • Manicheva, Olga A.;
    • Yablonsky, Peter K.;
    • Isaeva, Yulia D.;
    • Nosova, Elena Y.;
    • Mokrousov, Igor V.;
    • Vyazovaya, Anna A.;
    • Narvskaya, Olga V.;
    • Lapidus, Alla L.
    Publication type:
    Article
    6

    Large scale analysis of amino acid substitutions in bacterial proteomics.

    Published in:
    BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-1301-5
    By:
    • Ischenko, Dmitry;
    • Alexeev, Dmitry;
    • Shitikov, Egor;
    • Kanygina, Alexandra;
    • Malakhova, Maja;
    • Kostryukova, Elena;
    • Larin, Andrey;
    • Kovalchuk, Sergey;
    • Pobeguts, Olga;
    • Butenko, Ivan;
    • Anikanov, Nikolay;
    • Altukhov, Ilya;
    • Ilina, Elena;
    • Govorun, Vadim
    Publication type:
    Article
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    Microbiome Responses to an Uncontrolled Short-Term Diet Intervention in the Frame of the Citizen Science Project.

    Published in:
    Nutrients, 2018, v. 10, n. 5, p. 576, doi. 10.3390/nu10050576
    By:
    • Klimenko, Natalia S.;
    • Tyakht, Alexander V.;
    • Popenko, Anna S.;
    • Vasiliev, Anatoly S.;
    • Altukhov, Ilya A.;
    • Ischenko, Dmitry S.;
    • Shashkova, Tatiana I.;
    • Efimova, Daria A.;
    • Nikogosov, Dmitri A.;
    • Osipenko, Dmitrii A.;
    • Musienko, Sergey V.;
    • Selezneva, Kseniya S.;
    • Baranova, Ancha;
    • Kurilshikov, Alexander M.;
    • Toshchakov, Stepan M.;
    • Korzhenkov, Aleksei A.;
    • Samarov, Nazar I.;
    • Shevchenko, Margarita A.;
    • Tepliuk, Alina V.;
    • Alexeev, Dmitry G.
    Publication type:
    Article
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    Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn's disease discovered using metagenomic and genomic analyses.

    Published in:
    BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5306-5
    By:
    • Tyakht, Alexander V.;
    • Manolov, Alexander I.;
    • Kanygina, Alexandra V.;
    • Ischenko, Dmitry S.;
    • Kovarsky, Boris A.;
    • Popenko, Anna S.;
    • Pavlenko, Alexander V.;
    • Elizarova, Anna V.;
    • Rakitina, Daria V.;
    • Baikova, Julia P.;
    • Ladygina, Valentina G.;
    • Kostryukova, Elena S.;
    • Karpova, Irina Y.;
    • Semashko, Tatyana A.;
    • Larin, Andrei K.;
    • Grigoryeva, Tatyana V.;
    • Sinyagina, Mariya N.;
    • Malanin, Sergei Y.;
    • Shcherbakov, Petr L.;
    • Kharitonova, Anastasiya Y.
    Publication type:
    Article
    10

    Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease.

    Published in:
    Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0359-2
    By:
    • Dubinkina, Veronika B.;
    • Tyakht, Alexander V.;
    • Odintsova, Vera Y.;
    • Yarygin, Konstantin S.;
    • Kovarsky, Boris A.;
    • Pavlenko, Alexander V.;
    • Ischenko, Dmitry S.;
    • Popenko, Anna S.;
    • Alexeev, Dmitry G.;
    • Taraskina, Anastasiya Y.;
    • Nasyrova, Regina F.;
    • Krupitsky, Evgeny M.;
    • Shalikiani, Nino V.;
    • Bakulin, Igor G.;
    • Shcherbakov, Petr L.;
    • Skorodumova, Lyubov O.;
    • Larin, Andrei K.;
    • Kostryukova, Elena S.;
    • Abdulkhakov, Rustam A.;
    • Abdulkhakov, Sayar R.
    Publication type:
    Article
    11

    Unusual Large-Scale Chromosomal Rearrangements in <i>Mycobacterium tuberculosis</i> Beijing B0/W148 Cluster Isolates.

    Published in:
    PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0084971
    By:
    • Shitikov, Egor A.;
    • Bespyatykh, Julia A.;
    • Ischenko, Dmitry S.;
    • Alexeev, Dmitry G.;
    • Karpova, Irina Y.;
    • Kostryukova, Elena S.;
    • Isaeva, Yulia D.;
    • Nosova, Elena Y.;
    • Mokrousov, Igor V.;
    • Vyazovaya, Anna A.;
    • Narvskaya, Olga V.;
    • Vishnevsky, Boris I.;
    • Otten, Tatiana F.;
    • Zhuravlev, Valery Y.;
    • Yablonsky, Peter K.;
    • Ilina, Elena N.;
    • Govorun, Vadim M.
    Publication type:
    Article
    12

    Comparative Genomic Analysis of <i>Mycobacterium tuberculosis</i> Drug Resistant Strains from Russia.

    Published in:
    PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0056577
    By:
    • Ilina, Elena N.;
    • Shitikov, Egor A.;
    • Ikryannikova, Larisa N.;
    • Alekseev, Dmitry G.;
    • Kamashev, Dmitri E.;
    • Malakhova, Maja V.;
    • Parfenova, Tatjana V.;
    • Afanas’ev, Maxim V.;
    • Ischenko, Dmitry S.;
    • Bazaleev, Nikolai A.;
    • Smirnova, Tatjana G.;
    • Larionova, Elena E.;
    • Chernousova, Larisa N.;
    • Beletsky, Alexey V.;
    • Mardanov, Andrei V.;
    • Ravin, Nikolai V.;
    • Skryabin, Konstantin G.;
    • Govorun, Vadim M.
    Publication type:
    Article
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    Dissection of affinity captured LINE-1 macromolecular complexes.

    Published in:
    eLife, 2018, p. 1, doi. 10.7554/eLife.30094
    By:
    • Taylor, Martin S.;
    • Altukhov, Ilya;
    • Moll, Kelly R.;
    • Mita, Paolo;
    • Hua Jiang;
    • Adney, Emily M.;
    • Wudzinska, Aleksandra;
    • Badri, Sana;
    • Ischenko, Dmitry;
    • Eng, George;
    • Burns, Kathleen H.;
    • Fenyö, David;
    • Chait, Brian T.;
    • Alexeev, Dmitry;
    • Rout, Michael P.;
    • Boeke, Jef D.;
    • LaCava, John
    Publication type:
    Article