Works by INGVARSSON, PÄR K.

Results: 103

Response to Waterlogging Stress in Wild and Domesticated Accessions of Timothy (Phleum pratense) and Its Relatives P. alpinum and P. nodosum.

Published in:

Plants (2223-7747), 2023, v. 12, n. 23, p. 4033, doi. 10.3390/plants12234033

By:

Moreno, Silvana;
Bedada, Girma;
Rahimi, Yousef;
Ingvarsson, Pär K.;
Westerbergh, Anna;
Lundquist, Per-Olof

Publication type:

Article

Phenotypic Diversity in Domesticated and Wild Timothy Grass, and Closely Related Species for Forage Breeding.

Published in:

Plants (2223-7747), 2023, v. 12, n. 19, p. 3494, doi. 10.3390/plants12193494

By:

Rahimi, Yousef;
Bedada, Girma;
Moreno, Silvana;
Gustavsson, Anne-Maj;
Ingvarsson, Pär K.;
Westerbergh, Anna

Publication type:

Article

Genome-wide association study and genotypic variation for the major tocopherol content in rice grain.

Published in:

Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1426321

By:

Kazemzadeh, Sara;
Farrokhi, Naser;
Ahmadikhah, Asadollah;
Heydar, Kourosh Tabar;
Gilani, Abdolali;
Askari, Hossein;
Ingvarsson, Pär K.

Publication type:

Article

Geographic structure in metabolome and herbivore community co-occurs with genetic structure in plant defence genes.

Published in:

Ecology Letters, 2013, v. 16, n. 6, p. 791, doi. 10.1111/ele.12114

By:

Bernhardsson, Carolina;
Robinson, Kathryn M.;
Abreu, Ilka N.;
Jansson, Stefan;
Albrectsen, Benedicte R.;
Ingvarsson, Pär K.;
Eubanks, Micky

Publication type:

Article

Comparing the Effectiveness of Exome Capture Probes, Genotyping by Sequencing and Whole-Genome Re-Sequencing for Assessing Genetic Diversity in Natural and Managed Stands of Picea abies.

Published in:

Forests (19994907), 2020, v. 11, n. 11, p. 1185, doi. 10.3390/f11111185

By:

Eklöf, Helena;
Bernhardsson, Carolina;
Ingvarsson, Pär K.

Publication type:

Article

Integrating genome‐wide association mapping of additive and dominance genetic effects to improve genomic prediction accuracy in Eucalyptus.

Published in:

Plant Genome, 2022, v. 15, n. 2, p. 1, doi. 10.1002/tpg2.20208

By:

Tan, Biyue;
Ingvarsson, Pär K.

Publication type:

Article

Genome‐wide association study for lignocellulosic compounds and fermentable sugar in rice straw.

Published in:

Plant Genome, 2022, v. 15, n. 1, p. 1, doi. 10.1002/tpg2.20174

By:

Panahabadi, Rahele;
Ahmadikhah, Asadollah;
McKee, Lauren S.;
Ingvarsson, Pär K.;
Farrokhi, Naser

Publication type:

Article

QTL mapping of the narrow-branch "Pendula" phenotype in Norway spruce (Picea abies L. Karst.).

Published in:

Tree Genetics & Genomes, 2023, v. 19, n. 3, p. 1, doi. 10.1007/s11295-023-01599-6

By:

Gil-Muñoz, Francisco;
Bernhardsson, Carolina;
Ranade, Sonali Sachin;
Scofield, Douglas G.;
Pulkkinen, Pertti O.;
Ingvarsson, Pär K.;
García-Gil, M. Rosario

Publication type:

Article

Parametric mapping of QTL for resistance to European canker in apple in 'Aroma' × 'Discovery'.

Published in:

Tree Genetics & Genomes, 2023, v. 19, n. 2, p. 1, doi. 10.1007/s11295-023-01587-w

By:

Skytte af Sätra, Jonas;
Odilbekov, Firuz;
Ingvarsson, Pär K.;
van de Weg, Eric;
Garkava-Gustavsson, Larisa

Publication type:

Article

Genome-Wide Association Study (GWAS) and genome prediction of seedling salt tolerance in bread wheat (Triticum aestivum L.).

Published in:

BMC Plant Biology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12870-022-03936-8

By:

Javid, Saeideh;
Bihamta, Mohammad Reza;
Omidi, Mansour;
Abbasi, Ali Reza;
Alipour, Hadi;
Ingvarsson, Pär K.

Publication type:

Article

Genome-Wide Association Study (GWAS) and genome prediction of seedling salt tolerance in bread wheat (Triticum aestivum L.).

Published in:

BMC Plant Biology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12870-022-03936-8

By:

Javid, Saeideh;
Bihamta, Mohammad Reza;
Omidi, Mansour;
Abbasi, Ali Reza;
Alipour, Hadi;
Ingvarsson, Pär K.

Publication type:

Article

Genome-wide analyses of the mung bean NAC gene family reveals orthologs, co-expression networking and expression profiling under abiotic and biotic stresses.

Published in:

BMC Plant Biology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12870-022-03716-4

By:

Tariq, Rezwan;
Hussain, Ammara;
Tariq, Arslan;
Khalid, Muhammad Hayder Bin;
Khan, Imran;
Basim, Huseyin;
Ingvarsson, Pär K.

Publication type:

Article

Genome-wide association mapping uncovers sex-associated copy number variation markers and female hemizygous regions on the W chromosome in Salix viminalis.

Published in:

BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-08021-2

By:

Hallingbäck, Henrik R.;
Pucholt, Pascal;
Ingvarsson, Pär K.;
Rönnberg-Wästljung, Ann Christin;
Berlin, Sofia

Publication type:

Article

Molecular Evolution of a Small Gene Family of Wound Inducible Kunitz Trypsin Inhibitors in Populus.

Published in:

Journal of Molecular Evolution, 2006, v. 63, n. 1, p. 108, doi. 10.1007/s00239-005-0249-2

By:

Talyzina, Nina M.;
Ingvarsson, Pär K.

Publication type:

Article

Natural selection on floral traits of female Silene dioica by a sexually transmitted disease.

Published in:

New Phytologist, 2006, v. 169, n. 4, p. 729, doi. 10.1111/j.1469-8137.2005.01544.x

By:

Giles, Barbara E.;
Pettersson, Tor Mikael;
Carlsson-Granér, Ulla;
Ingvarsson, Pär K.

Publication type:

Article

Natural selection on floral traits of female Silene dioica by a sexually transmitted disease.

Published in:

New Phytologist, 2006, v. 169, n. 4, p. 729, doi. 10.1111/j.1469-8137.2005.01544.x

By:

Giles, Barbara E.;
Pettersson, Tor Mikael;
Carlsson‐Granér, Ulla;
Ingvarsson, Pär K.

Publication type:

Article

Genome-Wide Association Mapping of Mixed Linkage (1,3;1,4)-β-Glucan and Starch Contents in Rice Whole Grain.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.665745

By:

Panahabadi, Rahele;
Ahmadikhah, Asadollah;
McKee, Lauren S.;
Ingvarsson, Pär K.;
Farrokhi, Naser

Publication type:

Article

Characterization of Dynamic Regulatory Gene and Protein Networks in Wheat Roots Upon Perceiving Water Deficit Through Comparative Transcriptomics Survey.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.710867

By:

Rahimi, Yousef;
Ingvarsson, Pär K.;
Bihamta, Mohammad Reza;
Alipour, Hadi;
Taleei, Alireza;
Khoshnoodi Jabar Abadi, Shaghayegh

Publication type:

Article

Genomic analyses reveal natural selection on reproduction related genes between two closely related Populus (Salicaceae) species.

Published in:

Journal of Systematics & Evolution, 2023, v. 61, n. 5, p. 852, doi. 10.1111/jse.12911

By:

Tian, Yang;
Liu, Shu‐Yu;
Ingvarsson, Pär K.;
Zhao, Dan‐Dan;
Wang, Li;
Abuduhamiti, Baoerjiang;
Cai, Jin‐Feng;
Wu, Zhi‐Qiang;
Zhang, Jian‐Guo;
Wang, Zhao‐Shan

Publication type:

Article

Demography and Natural Selection Have Shaped Genetic Variation in the Widely Distributed Conifer Norway Spruce (Picea abies).

Published in:

Genome Biology & Evolution, 2020, v. 12, n. 2, p. 3803, doi. 10.1093/gbe/evaa005

By:

Wang, Xi;
Bernhardsson, Carolina;
Ingvarsson, Pär K

Publication type:

Article

Single-Copy Genes as Molecular Markers for Phylogenomic Studies in Seed Plants.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 5, p. 1130, doi. 10.1093/gbe/evx070

By:

Zhen Li;
De La Torre, Amanda R.;
Sterck, Lieven;
Cánovas, Francisco M.;
Avila, Concepción;
Merino, Irene;
Cabezas, José Antonio;
Cervera, María Teresa;
Ingvarsson, Pär K.;
Van de Peer, Yves

Publication type:

Article

Genome-Wide Analysis Reveals Diverged Patterns of Codon Bias, Gene Expression, and Rates of Sequence Evolution in Picea Gene Families.

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 4, p. 1002, doi. 10.1093/gbe/evv044

By:

De La Torre, Amanda R.;
Yao-Cheng Lin;
Van de Peer, Yves;
Ingvarsson, Pär K.

Publication type:

Article

The genetic basis of adaptation in phenology in an introduced population of Black Cottonwood (Populus trichocarpa, Torr. & Gray).

Published in:

BMC Plant Biology, 2021, v. 21, n. 1, p. 1, doi. 10.1186/s12870-021-03103-5

By:

Apuli, Rami-Petteri;
Richards, Thomas;
Rendón-Anaya, Martha;
Karacic, Almir;
Rönnberg-Wästljung, Ann-Christin;
Ingvarsson, Pär K.

Publication type:

Article

Comparative Proteomics of Resistant and Susceptible Strains of Frankliniella occidentalis to Abamectin.

Published in:

Electrophoresis, 2025, v. 46, n. 1/2, p. 112, doi. 10.1002/elps.202400171

By:

Gholami, Zahra;
Fatehi, Foad;
Mehraban, Fatemeh Habibpour;
Haynes, Paul A.;
Jahromi, Khalil Talebi;
Hosseininaveh, Vahid;
Mosallanejad, Hadi;
Ingvarsson, Pär K.;
Farrokhi, Naser

Publication type:

Article

Evolutionary Origins of Pseudogenes and Their Association with Regulatory Sequences in Plants.

Published in:

Plant Cell, 2019, v. 31, n. 3, p. 563, doi. 10.1105/tpc.18.00601

By:

Xie, Jianbo;
Li, Ying;
Liu, Xiaomin;
Zhao, Yiyang;
Li, Bailian;
Ingvarsson, Pär K.;
1, Deqiang Zhang

Publication type:

Article

GENE FLOW AND SELECTION ON PHENOTYPIC PLASTICITY IN AN ISLAND SYSTEM OF RANA TEMPORARIA.

Published in:

Evolution, 2011, v. 65, n. 3, p. 684, doi. 10.1111/j.1558-5646.2010.01122.x

By:

Lind, Martin I.;
Ingvarsson, Pär K.;
Johansson, Helena;
Hall, David;
Johansson, Frank

Publication type:

Article

Whole‐genome resequencing facilitates the development of a 50K single nucleotide polymorphism genotyping array for Scots pine (Pinus sylvestris L.) and its transferability to other pine species.

Published in:

Plant Journal, 2024, v. 117, n. 3, p. 944, doi. 10.1111/tpj.16535

By:

Estravis Barcala, Maximiliano;
van der Valk, Tom;
Chen, Zhiqiang;
Funda, Tomas;
Chaudhary, Rajiv;
Klingberg, Adam;
Fundova, Irena;
Suontama, Mari;
Hallingbäck, Henrik;
Bernhardsson, Carolina;
Nystedt, Björn;
Ingvarsson, Pär K.;
Sherwood, Ellen;
Street, Nathaniel;
Gyllensten, Ulf;
Nilsson, Ove;
Wu, Harry X.

Publication type:

Article

Genome-wide association study of agronomic traits in bread wheat reveals novel putative alleles for future breeding programs.

Published in:

BMC Plant Biology, 2019, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12870-019-2165-4

By:

Rahimi, Yousef;
Bihamta, Mohammad Reza;
Taleei, Alireza;
Alipour, Hadi;
Ingvarsson, Pär K.

Publication type:

Article

Evolution of the Correlated Genomic Variation Landscape Across a Divergence Continuum in the Genus Castanopsis.

Published in:

Molecular Biology & Evolution, 2024, v. 41, n. 9, p. 1, doi. 10.1093/molbev/msae191

By:

Chen, Xue-Yan;
Zhou, Biao-Feng;
Shi, Yong;
Liu, Hui;
Liang, Yi-Ye;
Ingvarsson, Pär K;
Wang, Baosheng

Publication type:

Article

Demographic History and Natural Selection Shape Patterns of Deleterious Mutation Load and Barriers to Introgression across Populus Genome.

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 2, p. 1, doi. 10.1093/molbev/msac008

By:

Liu, Shuyu;
Zhang, Lei;
Sang, Yupeng;
Lai, Qiang;
Zhang, Xinxin;
Jia, Changfu;
Long, Zhiqin;
Wu, Jiali;
Ma, Tao;
Mao, Kangshan;
Street, Nathaniel R;
Ingvarsson, Pär K;
Liu, Jianquan;
Wang, Jing

Publication type:

Article

Erratum to: Adaptive Introgression Facilitates Adaptation to High Latitudes in European Aspen (Populus Tremula L.).

Published in:

2022

By:

Rendón-Anaya, Martha;
Wilson, Jonathan;
Sveinsson, Sæmundur;
Fedorkov, Aleksey;
Cottrell, Joan;
Bailey, Mark E S;
Ruņǵis, Dainis;
Lexer, Christian;
Jansson, Stefan;
Robinson, Kathryn M;
Street, Nathaniel R;
Ingvarsson, Pär K

Publication type:

Correction Notice

Adaptive Introgression Facilitates Adaptation to High Latitudes in European Aspen (Populus tremula L.).

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 11, p. 5034, doi. 10.1093/molbev/msab229

By:

Rendón-Anaya, Martha;
Wilson, Jonathan;
Sveinsson, Sæmundur;
Fedorkov, Aleksey;
Cottrell, Joan;
Bailey, Mark E S;
Ruņis, Dainis;
Lexer, Christian;
Jansson, Stefan;
Robinson, Kathryn M;
Street, Nathaniel R;
Ingvarsson, Pär K

Publication type:

Article

Variation in Linked Selection and Recombination Drive Genomic Divergence during Allopatric Speciation of European and American Aspens.

Published in:

Molecular Biology & Evolution, 2016, v. 33, n. 7, p. 1754, doi. 10.1093/molbev/msw051

By:

Jing Wang;
Street, Nathaniel R.;
Scofield, Douglas G.;
Ingvarsson, Pär K.

Publication type:

Article

Spatial and temporal variation in disease levels of a floral smut (Anthracoidea heterospora) onCarex nigra.

Published in:

Journal of Ecology, 1998, v. 86, n. 1, p. 53, doi. 10.1046/j.1365-2745.1998.00235.x

By:

Ingvarsson, Pär K.

Publication type:

Article

Natural Selection and Recombination Rate Variation Shape Nucleotide Polymorphism Across the Genomes of Three Related Populus Species.

Published in:

Genetics, 2016, v. 202, n. 3, p. 1185, doi. 10.1534/genetics.115.183152

By:

Jing Wang;
Street, Nathaniel R.;
Scofield, Douglas G.;
Ingvarsson, Pär K.

Publication type:

Article

Local Selection Across a Latitudinal Gradient Shapes Nucleotide Diversity in Balsam Poplar, Populus balsamifera L.

Published in:

Genetics, 2011, v. 188, n. 4, p. 941, doi. 10.1534/genetics.111.128041

By:

Keller, Stephen R.;
Levsen, Nicholas;
Ingvarsson, Pär K.;
Olson, Matthew S.;
Tiffin, Peter

Publication type:

Article

Multiocus Patterns of Nucleotide Polymorphism and the Demographic History of Populus tremula.

Published in:

Genetics, 2008, v. 180, n. 1, p. 329, doi. 10.1534/genetics.108.090431

By:

Ingvarsson, Pär K.

Publication type:

Article

Nucleotide Polymorphism and Phenotypic Associations Within and Around the phytochrome B2 Locus in European Aspen (Populus tremula, Salicaceae).

Published in:

Genetics, 2008, v. 178, n. 4, p. 2217, doi. 10.1534/genetics.107.082354

By:

Ingvarsson, Pär K.;
Garcia, M. Victoria;
Luquez, Virginia;
Hall, David;
Jansson, Stefan

Publication type:

Article

Nucleotide Polymorphism and Linkage Disequilibrium Within and Among Natural Populations of European Aspen (Populus tremula L., Salicaceae).

Published in:

Genetics, 2005, v. 169, n. 2, p. 945, doi. 10.1534/genetics.104.034959

By:

Ingvarsson, Pär K.

Publication type:

Article

Population subdivision and the HudsonKreitmanAguade test: testing for deviations from the neutral model in organelle genomes.

Published in:

Genetics Research, 2004, v. 83, n. 1, p. 31, doi. 10.1017/s0016672303006529

By:

PÄR K. INGVARSSON

Publication type:

Article

Quantifying adaptive evolution and the effects of natural selection across the Norway spruce genome.

Published in:

Molecular Ecology, 2023, v. 32, n. 19, p. 5288, doi. 10.1111/mec.17106

By:

Wang, Xi;
Ingvarsson, Pär K.

Publication type:

Article

Drivers of genomic landscapes of differentiation across a Populus divergence gradient.

Published in:

Molecular Ecology, 2023, v. 32, n. 15, p. 4348, doi. 10.1111/mec.17034

By:

Shang, Huiying;
Field, David L.;
Paun, Ovidiu;
Rendón‐Anaya, Martha;
Hess, Jaqueline;
Vogl, Claus;
Liu, Jianquan;
Ingvarsson, Pär K.;
Lexer, Christian;
Leroy, Thibault

Publication type:

Article

Genomic vulnerability to climate change in Quercus acutissima, a dominant tree species in East Asian deciduous forests.

Published in:

Molecular Ecology, 2023, v. 32, n. 7, p. 1639, doi. 10.1111/mec.16843

By:

Yuan, Shuai;
Shi, Yong;
Zhou, Biao‐Feng;
Liang, Yi‐Ye;
Chen, Xue‐Yan;
An, Qing‐Qing;
Fan, Yan‐Ru;
Shen, Zhao;
Ingvarsson, Pär K.;
Wang, Baosheng

Publication type:

Article

Killing two enemies with one stone? Genomics of resistance to two sympatric pathogens in Norway spruce.

Published in:

Molecular Ecology, 2021, v. 30, n. 18, p. 4433, doi. 10.1111/mec.16058

By:

Capador‐Barreto, Hernán D.;
Bernhardsson, Carolina;
Milesi, Pascal;
Vos, Ingrid;
Lundén, Karl;
Wu, Harry X.;
Karlsson, Bo;
Ingvarsson, Pär K.;
Stenlid, Jan;
Elfstrand, Malin

Publication type:

Article

Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.

Published in:

Molecular Ecology, 2020, v. 29, n. 6, p. 1120, doi. 10.1111/mec.15388

By:

Wang, Jing;
Street, Nathaniel R.;
Park, Eung‐Jun;
Liu, Jianquan;
Ingvarsson, Pär K.

Publication type:

Article

Linking plant genes to insect communities: Identifying the genetic bases of plant traits and community composition.

Published in:

Molecular Ecology, 2019, v. 28, n. 19, p. 4404, doi. 10.1111/mec.15158

By:

Barker, Hilary L.;
Riehl, Jennifer F.;
Bernhardsson, Carolina;
Rubert‐Nason, Kennedy F.;
Holeski, Liza M.;
Ingvarsson, Pär K.;
Lindroth, Richard L.

Publication type:

Article

Pathway position constrains the evolution of an ecologically important pathway in aspens (Populus tremula L.).

Published in:

Molecular Ecology, 2018, v. 27, n. 16, p. 3317, doi. 10.1111/mec.14785

By:

Cole, Christopher T.;
Ingvarsson, Pär K.

Publication type:

Article

Multilocus analysis of nucleotide variation and speciation in three closely related Populus ( Salicaceae) species.

Published in:

Molecular Ecology, 2015, v. 24, n. 19, p. 4994, doi. 10.1111/mec.13368

By:

Du, Shuhui;
Wang, Zhaoshan;
Ingvarsson, Pär K.;
Wang, Dongsheng;
Wang, Junhui;
Wu, Zhiqiang;
Tembrock, Luke R.;
Zhang, Jianguo

Publication type:

Article

Geographical structure and adaptive population differentiation in herbivore defence genes in European aspen ( Populus tremula L., Salicaceae).

Published in:

Molecular Ecology, 2012, v. 21, n. 9, p. 2197, doi. 10.1111/j.1365-294X.2012.05524.x

By:

BERNHARDSSON, CAROLINA;
INGVARSSON, PÄR K.

Publication type:

Article

Using association mapping to dissect the genetic basis of complex traits in plants.

Published in:

Briefings in Functional Genomics, 2010, v. 9, n. 2, p. 157, doi. 10.1093/bfgp/elp048

By:

Hall, David;
Tegström, Carolina;
Ingvarsson, Pär K.

Publication type:

Article