Works by Hyten, David

Results: 48

Development of molecular inversion probes for soybean progeny genomic selection genotyping.
Published in:
Plant Genome, 2023, v. 16, n. 1, p. 1, doi. 10.1002/tpg2.20270
By:
- Wang, Haichuan;
- Campbell, Benjamin;
- Happ, Mary;
- McConaughy, Samantha;
- Lorenz, Aaron;
- Amundsen, Keenan;
- Song, Qijian;
- Pantalone, Vincent;
- Hyten, David
Publication type:
Article
SNP-PHAGE -- High throughput SNP discovery pipeline.
Published in:
BMC Bioinformatics, 2006, v. 7, p. 1, doi. 10.1186/1471-2105-7-468
By:
- Matukumalli, Lakshmi K;
- Grefenstette, John J;
- Hyten, David L;
- Ik-Young Choi;
- Cregan, Perry B;
- Van Tassell, Curtis P
Publication type:
Article
Application of machine learning in SNP discovery.
Published in:
BMC Bioinformatics, 2006, v. 7, p. 4, doi. 10.1186/1471-2105-7-4
By:
- Matukumalli, Lakshmi K;
- Grefenstette, John J;
- Hyten, David L;
- Ik-Young Choi;
- Cregan, Perry B;
- Van Tassell, Curtis P
Publication type:
Article
Molecular Mapping and Identification of Soybean Fatty Acid Modifier Quantitative Trait Loci.
Published in:
Journal of the American Oil Chemists' Society (JAOCS), 2004, v. 81, n. 12, p. 1115, doi. 10.1007/s11746-004-1027-z
By:
- Hyten, David L.;
- Pantalone, Vincent R.;
- Saxton, Arnold M.;
- Schmidt, Michael E.;
- Sams, Carl E.
Publication type:
Article
Genome sequence of the palaeopolyploid soybean.
Published in:
2010
By:
- Schmutz, Jeremy;
- Cannon, Steven B.;
- Schlueter, Jessica;
- Ma, Jianxin;
- Mitros, Therese;
- Nelson, William;
- Hyten, David L.;
- Song, Qijian;
- Thelen, Jay J.;
- Cheng, Jianlin;
- Xu, Dong;
- Hellsten, Uffe;
- May, Gregory D.;
- Yu, Yeisoo;
- Sakurai, Tetsuya;
- Umezawa, Taishi;
- Bhattacharyya, Madan K.;
- Sandhu, Devinder;
- Valliyodan, Babu;
- Lindquist, Erika
Publication type:
Correction Notice
Genome sequence of the palaeopolyploid soybean.
Published in:
Nature, 2010, v. 463, n. 7278, p. 178, doi. 10.1038/nature08670
By:
- Schmutz, Jeremy;
- Cannon, Steven B.;
- Schlueter, Jessica;
- Jianxin Ma;
- Mitros, Therese;
- Nelson, William;
- Hyten, David L.;
- Qijian Song;
- Thelen, Jay J.;
- Jianlin Cheng;
- Dong Xu;
- Hellsten, Uffe;
- May, Gregory D.;
- Yu, Yeisoo;
- Sakurai, Tetsuya;
- Umezawa, Taishi;
- Bhattacharyya, Madan K.;
- Sandhu, Devinder;
- Valliyodan, Babu;
- Lindquist, Erika
Publication type:
Article
Recombination hotspots in soybean [Glycine max (L.) Merr.].
Published in:
G3: Genes | Genomes | Genetics, 2023, v. 13, n. 6, p. 1, doi. 10.1093/g3journal/jkad075
By:
- McConaughy, Samantha;
- Amundsen, Keenan;
- Qijian Song;
- Pantalone, Vince;
- Hyten, David
Publication type:
Article
Generating High Density, Low Cost Genotype Data in Soybean [Glycine max (L.) Merr.].
Published in:
G3: Genes | Genomes | Genetics, 2019, v. 9, n. 7, p. 2153, doi. 10.1534/g3.119.400093
By:
- Happ, Mary M.;
- Haichuan Wang;
- Graef, George L.;
- Hyten, David L.
Publication type:
Article
Multi-Population Selective Genotyping to Identify Soybean [Glycine max (L.) Merr.] Seed Protein and Oil QTLs.
Published in:
G3: Genes | Genomes | Genetics, 2016, v. 6, n. 6, p. 1635, doi. 10.1534/g3.116.027656
By:
- Phansak, Piyaporn;
- Soonsuwon, Watcharin;
- Hyten, David L.;
- Song, Qijian;
- Cregan, Perry B.;
- Graef, George L.;
- Specht, James E.
Publication type:
Article
SNP Assay Development for Linkage Map Construction, Anchoring Whole-Genome Sequence, and Other Genetic and Genomic Applications in Common Bean.
Published in:
G3: Genes | Genomes | Genetics, 2015, v. 5, n. 11, p. 2285, doi. 10.1534/g3.115.020594
By:
- Qijian Song;
- Gaofeng Jia;
- Hyten, David L.;
- Jenkins, Jerry;
- Eun-Young Hwang;
- Schroeder, Steven G.;
- Osorno, Juan M.;
- Schmutz, Jeremy;
- Jackson, Scott A.;
- McClean, Phillip E.;
- Cregan, Perry B.
Publication type:
Article
Fingerprinting Soybean Germplasm and Its Utility in Genomic Research.
Published in:
G3: Genes | Genomes | Genetics, 2015, v. 5, n. 10, p. 1999, doi. 10.1534/g3.115.019000
By:
- Qijian Song;
- Hyten, David L.;
- Gaofeng Jia;
- Quigley, Charles V.;
- Fickus, Edward W.;
- Nelson, Randall L.;
- Cregan, Perry B.
Publication type:
Article
Effects of demographic history on recombination hotspots in soybean.
Published in:
Plant Journal, 2024, v. 119, n. 2, p. 1030, doi. 10.1111/tpj.16814
By:
- McConaughy, Samantha;
- Amundsen, Keenan;
- Hyten, David
Publication type:
Article
Soybean BARCSoySNP6K: An assay for soybean genetics and breeding research.
Published in:
Plant Journal, 2020, v. 104, n. 3, p. 800, doi. 10.1111/tpj.14960
By:
- Song, Qijian;
- Yan, Long;
- Quigley, Charles;
- Fickus, Edward;
- Wei, He;
- Chen, Linfeng;
- Dong, Faming;
- Araya, Susan;
- Liu, Jinlong;
- Hyten, David;
- Pantalone, Vincent;
- Nelson, Randall L.
Publication type:
Article
Crop DNA extraction with lab-made magnetic nanoparticles.
Published in:
PLoS ONE, 2024, v. 19, n. 1, p. 1, doi. 10.1371/journal.pone.0296847
By:
- Wang, Haichuan;
- Zhao, Xueqi;
- Tan, Li;
- Zhu, Junwei;
- Hyten, David
Publication type:
Article
Fine mapping of the soybean aphid-resistance gene Rag2 in soybean PI 200538.
Published in:
Theoretical & Applied Genetics, 2010, v. 121, n. 3, p. 599, doi. 10.1007/s00122-010-1333-6
By:
- Ki-Seung Kim;
- Hill, Curtis B.;
- Hartman, Glen L.;
- Hyten, David L.;
- Hudson, Matthew E.;
- Diers, Brian W.
Publication type:
Article
Fine mapping the soybean aphid resistance gene Rag1 in soybean.
Published in:
Theoretical & Applied Genetics, 2010, v. 120, n. 5, p. 1063, doi. 10.1007/s00122-009-1234-8
By:
- Ki-Seung Kim;
- Bellendir, Stephanie;
- Hudson, Karen A.;
- Hill, Curtis B.;
- Hartman, Glen L.;
- Hyten, David L.;
- Hudson, Matthew E.;
- Diers, Brian W.
Publication type:
Article
High-throughput genotyping with the GoldenGate assay in the complex genome of soybean.
Published in:
Theoretical & Applied Genetics, 2008, v. 116, n. 7, p. 945, doi. 10.1007/s00122-008-0726-2
By:
- Hyten, David;
- Song, Qijian;
- Choi, Ik-Young;
- Yoon, Mun-Sup;
- Specht, James;
- Matukumalli, Lakshmi;
- Nelson, Randall;
- Shoemaker, Randy;
- Young, Nevin;
- Cregan, Perry
Publication type:
Article
Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01.
Published in:
BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-015-2344-0
By:
- Qijian Song;
- Jenkins, Jerry;
- Gaofeng Jia;
- Hyten, David L.;
- Pantalone, Vince;
- Jackson, Scott A.;
- Schmutz, Jeremy;
- Cregan, Perry B.
Publication type:
Article
A genome-wide association study of seed protein and oil content in soybean.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-1
By:
- Eun-Young Hwang;
- Qijian Song;
- Jia, Gaofeng;
- Specht, James E.;
- Hyten, David L.;
- Costa, Jose;
- Cregan, Perry B.
Publication type:
Article
Seed Protein and Oil QTL in a Prominent Glycine max Genetic Pedigree: Enhancing Stability for Marker Assisted Selection.
Published in:
Agronomy, 2023, v. 13, n. 2, p. 567, doi. 10.3390/agronomy13020567
By:
- Fields, Jeneen;
- Saxton, Arnold M.;
- Beyl, Caula A.;
- Kopsell, Dean A.;
- Cregan, Perry B.;
- Hyten, David L.;
- Cuvaca, Ivan;
- Pantalone, Vincent R.
Publication type:
Article
Candidate Genes Modulating Reproductive Timing in Elite US Soybean Lines Identified in Soybean Alleles of Arabidopsis Flowering Orthologs With Divergent Latitude Distribution.
Published in:
Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.889066
By:
- Dietz, Nicholas;
- Chan, Yen On;
- Scaboo, Andrew;
- Graef, George;
- Hyten, David;
- Happ, Mary;
- Diers, Brian;
- Lorenz, Aaron;
- Wang, Dechun;
- Joshi, Trupti;
- Bilyeu, Kristin
Publication type:
Article
Context-Specific Genomic Selection Strategies Outperform Phenotypic Selection for Soybean Quantitative Traits in the Progeny Row Stage.
Published in:
Crop Science, 2019, v. 59, n. 1, p. 54, doi. 10.2135/cropsci2018.03.0197
By:
- Smallwood, Christopher J.;
- Bhandari, Hem S.;
- Pantalone, Vincent R.;
- Saxton, Arnold M.;
- Gillman, Jason D.;
- Wadl, Phillip A.;
- Fallen, Benjamin D.;
- Hyten, David L.;
- Song, Qijian
Publication type:
Article
Detection and Confirmation of Quantitative Trait Loci for Soybean Seed Isoflavones.
Published in:
Crop Science, 2014, v. 54, n. 2, p. 595, doi. 10.2135/cropsci2013.05.0340
By:
- Smallwood, Christopher J.;
- Nyinyi, Catherine N.;
- Kopsell, Dean A.;
- Sams, Carl E.;
- West, Dennis R.;
- Pengyin Chen;
- Kantartzi, Stella K.;
- Cregan, Perry B.;
- Hyten, David L.;
- Pantalone, Vincent R.
Publication type:
Article
Phytophthora Root Rot Resistance in Soybean E00003.
Published in:
Crop Science, 2014, v. 54, n. 2, p. 492, doi. 10.2135/cropsci2012.11.0631
By:
- Zhongnan Zhang;
- Jianjun Hao;
- Jiazheng Yuan;
- Qijian Song;
- Hyten, David L.;
- Cregan, Perry B.;
- Guorong Zhang;
- Cuihua Gu;
- Ming Li;
- Dechun Wang
Publication type:
Article
Genetic Mapping and Confirmation of Quantitative Trait Loci for Seed Protein and Oil Contents and Seed Weight in Soybean.
Published in:
Crop Science, 2013, v. 53, n. 3, p. 765, doi. 10.2135/cropsci2012.03.0153
By:
- Pathan, Safiullah M.;
- Vuong, Tri;
- Clark, Kerry;
- Jeong-Dong Lee;
- Shannon, J. Grover;
- Roberts, Craig A.;
- Ellersieck, Mark R.;
- Burton, Joseph W.;
- Cregan, Perry B.;
- Hyten, David L.;
- Nguyen, Henry T.;
- Sleper, David A.
Publication type:
Article
Stacking Resistance Alleles from Wild and Domestic Soybean Sources Improves Soybean Cyst Nematode Resistance.
Published in:
Crop Science, 2011, v. 51, n. 3, p. 934, doi. 10.2135/cropsci2010.08.0459
By:
- Myungsik Kim;
- Hyten, David L.;
- Niblack, Terry L.;
- Diers, Brian W.
Publication type:
Article
Abundance of SSR Motifs and Development of Candidate Polymorphic SSR Markers (BARCSOYSSṞ1.0) in Soybean.
Published in:
Crop Science, 2010, v. 50, n. 5, p. 1950, doi. 10.2135/cropsci2009.10.0607
By:
- Qijian Song;
- Gaofeng Jia;
- Youlin Zhu;
- David Grant;
- Nelson, Rex T.;
- Eun-Young Hwang;
- Hyten, David L.;
- Cregan, Perry B.
Publication type:
Article
A High Density Integrated Genetic Linkage Map of Soybean and the Development of a 1536 Universal Soy Linkage Panel for Quantitative Trait Locus Mapping.
Published in:
Crop Science, 2010, v. 50, n. 3, p. 960, doi. 10.2135/cropsci2009.06.0360
By:
- Hyten, David L.;
- Ik-Young Choi;
- Qijian Song;
- Specht, James E.;
- Carter, Jr., Thomas E.;
- Shoemaker, Randy C.;
- Eun-Young Hwang;
- Matukumalli, Lakshmi K.;
- Cregan, Perry B.
Publication type:
Article
Mapping and Confirmation of a New Allele at Rpp1 from Soybean PI 594538A Conferring RB Lesion—Type Resistance to Soybean Rust.
Published in:
Crop Science, 2009, v. 49, n. 3, p. 783, doi. 10.2135/cropsci2008.06.0335
By:
- Chakraborty, Nanda;
- Curley, Joe;
- Frederick, Reid D.;
- Hyten, David L.;
- Nelson, Randall L.;
- Hartman, Glen L.;
- Diers, Brian W.
Publication type:
Article
Bulked Segregant Analysis Using the GoldenGate Assay to Locate the Rpp3 Locus that Confers Resistance to Soybean Rust in Soybean.
Published in:
Crop Science, 2009, v. 49, n. 1, p. 265, doi. 10.2135/cropsci2008.08.0511
By:
- Hyten, David L.;
- Smith, James R.;
- Frederick, Reid D.;
- Tucker, Mark L.;
- Qijian Song;
- Cregan, Perry B.
Publication type:
Article
The Composition and Origins of Genomic Variation among Individuals of the Soybean Reference Cultivar Williams 82.
Published in:
Plant Physiology, 2011, v. 155, n. 2, p. 645, doi. 10.1104/pp.110.166736
By:
- Haun, William J.;
- Hyten, David L.;
- Xu, Wayne W.;
- Gerhardt, Daniel J.;
- Albert, Thomas J.;
- Richmond, Todd;
- Jeddeloh, Jeffrey A.;
- Jia, Gaofeng;
- Springer, Nathan M.;
- Vance, Carroll P.;
- Stupar, Robert M.
Publication type:
Article
An Integrative Approach to Genomic Introgression Mapping.
Published in:
Plant Physiology, 2010, v. 154, n. 1, p. 3, doi. 10.1104/pp.110.158949
By:
- Severin, Andrew J.;
- Peiffer, Gregory A.;
- Xu, Wayne W.;
- Hyten, David L.;
- Bucciarelli, Bruna;
- O'Rourke, Jamie A.;
- Yung-Tsi Bolon;
- Grant, David;
- Farmer, Andrew D.;
- May, Gregory D.;
- Vance, Carroll P.;
- Shoemaker, Randy C.;
- Stupar, Robert M.
Publication type:
Article
High-throughput SNP discovery and assay development in common bean.
Published in:
BMC Genomics, 2010, v. 11, p. 475, doi. 10.1186/1471-2164-11-475
By:
- Hyten, David L.;
- Qijian Song;
- Fickus, Edward W.;
- Quigley, Charles V.;
- Jong-Sung Lim;
- Ik-Young Choi;
- Eun-Young Hwang;
- Pastor-Corrales, Marcial;
- Cregan, Perry B.
Publication type:
Article
High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence.
Published in:
BMC Genomics, 2010, v. 11, p. 1, doi. 10.1186/1471-2164-11-38
By:
- Hyten, David L;
- Cannon, Steven B;
- Qijian Song;
- Weeks, Nathan;
- Fickus, Edward W;
- Shoemaker, Randy C;
- Specht, James E;
- Farmer, Andrew D;
- May, Gregory D;
- Cregan, Perry B
Publication type:
Article
Structural and Functional Divergence of a 1-Mb Duplicated Region in the Soybean (Glycine max) Genome and Comparison to an Orthologous Region from Phaseolus vulgaris.
Published in:
Plant Cell, 2010, v. 22, n. 8, p. 2545, doi. 10.1105/tpc.110.074229
By:
- Lin, Jer-Young;
- Stupar, Robert M.;
- Hans, Christian;
- Hyten, David L.;
- Jackson, Scott A.
Publication type:
Article
A Soybean Transcript Map: Gene Distribution, Haplotype and Single-Nucleotide Polymorphism Analysis.
Published in:
Genetics, 2007, v. 176, n. 1, p. 685, doi. 10.1534/genetics.107.070821
By:
- Ik-Young Choi;
- Hyten, David L.;
- Matukumalli, Lakshmi K.;
- Qijian Song;
- Chaky, Julian M.;
- Quigley, Charles V.;
- Chase, Kevin;
- Lark, K. Gordon;
- Reiter, Robert S.;
- Mun-Sup Yoon;
- Eun-Young Hwang;
- Seung-In Yi;
- Young, Nevin D.;
- Shoemaker, Randy C.;
- van Tassell, Curtis P.;
- Specht, James E.;
- Cregan, Perry B.
Publication type:
Article
Highly Variable Patterns of Linkage Disequilibrium in Multiple Soybean Populations.
Published in:
Genetics, 2007, v. 175, n. 4, p. 1937, doi. 10.1534/genetics.106.069740
By:
- Hyten, David L.;
- IK-Young Choi;
- Qijian Song;
- Shoemaker, Randy C.;
- Nelson, Randall L.;
- Costa, Jose M.;
- Specht, James E.;
- Cregan, Perry B.
Publication type:
Article
A bumper crop of SNPs in soybean through high‐density genotyping‐by‐sequencing (HD‐GBS).
Published in:
Plant Biotechnology Journal, 2021, v. 19, n. 5, p. 860, doi. 10.1111/pbi.13551
By:
- Torkamaneh, Davoud;
- Laroche, Jérôme;
- Boyle, Brian;
- Hyten, David L.;
- Belzile, François
Publication type:
Article
Comparing a Mixed Model Approach to Traditional Stability Estimators for Mapping Genotype by Environment Interactions and Yield Stability in Soybean [ Glycine max (L.) Merr.].
Published in:
Frontiers in Plant Science, 2021, v. 11, p. N.PAG, doi. 10.3389/fpls.2021.630175
By:
- Happ, Mary M.;
- Graef, George L.;
- Wang, Haichuan;
- Howard, Reka;
- Posadas, Luis;
- Hyten, David L.
Publication type:
Article
Molecular Characterization of Resistance to Soybean Rust (Phakopsora pachyrhizi Syd. & Syd.) in Soybean Cultivar DT 2000 (PI 635999).
Published in:
PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0164493
By:
- Vuong, Tri D.;
- Walker, David R.;
- Nguyen, Binh T.;
- Nguyen, Tuyet T.;
- Dinh, Hoan X.;
- Hyten, David L.;
- Cregan, Perry B.;
- Sleper, David A.;
- Lee, Jeong D.;
- Shannon, James G.;
- Nguyen, Henry T.
Publication type:
Article
Mapping the low palmitate fap1 mutation and validation of its effects in soybean oil and agronomic traits in three soybean populations.
Published in:
Theoretical & Applied Genetics, 2014, v. 127, n. 1, p. 97, doi. 10.1007/s00122-013-2204-8
By:
- Cardinal, Andrea;
- Whetten, Rebecca;
- Wang, Sanbao;
- Auclair, Jérôme;
- Hyten, David;
- Cregan, Perry;
- Bachlava, Eleni;
- Gillman, Jason;
- Ramirez, Martha;
- Dewey, Ralph;
- Upchurch, Greg;
- Miranda, Lilian;
- Burton, Joseph
Publication type:
Article
Mapping soybean aphid resistance genes in PI 567598B.
Published in:
Theoretical & Applied Genetics, 2013, v. 126, n. 8, p. 2081, doi. 10.1007/s00122-013-2120-y
By:
- Bales, Carmille;
- Zhang, Guorong;
- Liu, Menghan;
- Mensah, Clarice;
- Gu, Cuihua;
- Song, Qijian;
- Hyten, David;
- Cregan, Perry;
- Wang, Dechun
Publication type:
Article
Molecular mapping of soybean rust resistance in soybean accession PI 561356 and SNP haplotype analysis of the Rpp1 region in diverse germplasm.
Published in:
Theoretical & Applied Genetics, 2012, v. 125, n. 6, p. 1339, doi. 10.1007/s00122-012-1932-5
By:
- Kim, Ki-Seung;
- Unfried, Jair;
- Hyten, David;
- Frederick, Reid;
- Hartman, Glen;
- Nelson, Randall;
- Song, Qijian;
- Diers, Brian
Publication type:
Article
Quantitative trait locus analysis of unsaturated fatty acids in a recombinant inbred population of soybean.
Published in:
Molecular Breeding, 2014, v. 33, n. 2, p. 281, doi. 10.1007/s11032-013-9948-3
By:
- Wang, Xianzhi;
- Jiang, Guo-Liang;
- Green, Marci;
- Scott, Roy;
- Hyten, David;
- Cregan, Perry
Publication type:
Article
Quantitative trait locus analysis of saturated fatty acids in a population of recombinant inbred lines of soybean.
Published in:
Molecular Breeding, 2012, v. 30, n. 2, p. 1163, doi. 10.1007/s11032-012-9704-0
By:
- Wang, Xianzhi;
- Jiang, Guo-Liang;
- Green, Marci;
- Scott, Roy;
- Hyten, David;
- Cregan, Perry
Publication type:
Article
Identification and validation of quantitative trait loci for seed yield, oil and protein contents in two recombinant inbred line populations of soybean.
Published in:
Molecular Genetics & Genomics, 2014, v. 289, n. 5, p. 935, doi. 10.1007/s00438-014-0865-x
By:
- Wang, Xianzhi;
- Jiang, Guo-Liang;
- Green, Marci;
- Scott, Roy;
- Song, Qijian;
- Hyten, David;
- Cregan, Perry
Publication type:
Article
Development and Evaluation of SoySNP50K, a High- Density Genotyping Array for Soybean.
Published in:
PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0054985
By:
- Qijian Song;
- Hyten, David L.;
- Gaofeng Jia;
- Quigley, Charles V.;
- Fickus, Edward W.;
- Nelson, Randall L.;
- Cregan, Perry B.
Publication type:
Article
Structural Variants in the Soybean Genome Localize to Clusters of Biotic Stress-Response Genes<sup>1[W][OA]</sup>.
Published in:
Plant Physiology, 2012, v. 159, n. 4, p. 1295, doi. 10.1104/pp.112.194605
By:
- McHale, Leah K.;
- Haun, William J.;
- Xu, Wayne W.;
- Bhaskar, Pudota B.;
- Anderson, Justin E.;
- Hyten, David L.;
- Gerhardt, Daniel J.;
- Jeddeloh, Jeffrey A.;
- Stupar, Robert M.
Publication type:
Article