Works by Homayouni, Ramin

Results: 59

Glutamate Dysfunction Associated with Developmental Cerebellar Damage: Relevance to Autism Spectrum Disorders.

Published in:

Cerebellum, 2014, v. 13, n. 3, p. 346, doi. 10.1007/s12311-013-0541-4

By:

McKimm, Eric;
Corkill, Beau;
Goldowitz, Dan;
Albritton, Lorraine;
Homayouni, Ramin;
Blaha, Charles;
Mittleman, Guy

Publication type:

Article

An Examination of Effective Factors on Academic Success of Students of Zahedan Medical University.

Published in:

Future of Medical Education Journal, 2013, v. 3, n. 3, p. 35

By:

Saravani, Solyman;
Haghighi, Javid Dehghan;
Abed-Saeedi, Zhila;
Zand, Ramin Homayouni

Publication type:

Article

Risk factors associated with glycated hemoglobin A1c trajectories progressing to type 2 diabetes.

Published in:

Annals of Medicine, 2023, v. 55, n. 1, p. 371, doi. 10.1080/07853890.2022.2164347

By:

Halalau, Alexandra;
Roy, Sujoy;
Hegde, Arpitha;
Khanal, Sumesh;
Langnas, Emily;
Raja, Maidah;
Homayouni, Ramin

Publication type:

Article

Large-scale identification of social and behavioral determinants of health from clinical notes: comparison of Latent Semantic Indexing and Generative Pretrained Transformer (GPT) models.

Published in:

BMC Medical Informatics & Decision Making, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12911-024-02705-x

By:

Roy, Sujoy;
Morrell, Shane;
Zhao, Lili;
Homayouni, Ramin

Publication type:

Article

Coordinated regulation of Rel expression by MAP3K4, CBP, and HDAC6 controls phenotypic switching.

Published in:

Communications Biology, 2020, v. 3, n. 1, p. N.PAG, doi. 10.1038/s42003-020-01200-z

By:

Shendy, Noha Ahmed Mohammed;
Raghu, Deepthi;
Roy, Sujoy;
Perry, Charles Hamilton;
Safi, Adiba;
Branco, Miguel Ramos;
Homayouni, Ramin;
Abell, Amy Noel

Publication type:

Article

Pdr1 regulates multidrug resistance in Candida glabrata: gene disruption and genome-wide expression studies.

Published in:

Molecular Microbiology, 2006, v. 61, n. 3, p. 704, doi. 10.1111/j.1365-2958.2006.05235.x

By:

Vermitsky, John-Paul;
Earhart, Kelly D.;
Smith, W. Lamar;
Homayouni, Ramin;
Edlind, Thomas D.;
Rogers, P. David

Publication type:

Article

Viewpoints of Iran Dermatology Board Examination committee members on improving its validity.

Published in:

Dermatology & Cosmetic, 2014, v. 5, n. 4, p. 169

By:

Khatami, Alireza;
Firooz, Alireza;
Mortazavi, Fathieh;
Zand, Ramin Homayouni;
Dowlati, Yahya

Publication type:

Article

Neurogenetic and Neuroimaging Evidence for a Conceptual Model of Dopaminergic Contributions to Obesity.

Published in:

2015

By:

Stanfill, Ansley Grimes;
Conley, Yvette;
Cashion, Ann;
Thompson, Carol;
Homayouni, Ramin;
Cowan, Patricia;
Hathaway, Donna

Publication type:

Journal Article

Reply to Escandon et al.

Published in:

2021

By:

Sims, Matthew;
Podolsky, Robert H;
Maine, Gabriel N;
Kennedy, Richard H;
Homayouni, Ramin

Publication type:

Letter to the Editor

Coronavirus Disease 2019 (COVID-19) Seropositivity and Asymptomatic Rates in Healthcare Workers Are Associated with Job Function and Masking.

Published in:

Clinical Infectious Diseases, 2021, v. 73, p. S154, doi. 10.1093/cid/ciaa1684

By:

Sims, Matthew D;
Maine, Gabriel N;
Childers, Karen Lins;
Podolsky, Robert H;
Voss, Daniel R;
Berkiw-Scenna, Natalie;
Oh, Joyce;
Heinrich, Kevin E;
Keil, Hans;
Kennedy, Richard H;
Homayouni, Ramin

Publication type:

Article

Collaborative development of the Arrowsmith two node search interface designed for laboratory investigators.

Published in:

Journal of Biomedical Discovery & Collaboration, 2006, v. 1, p. 8, doi. 10.1186/1747-5333-1-8

By:

Smalheiser, Neil R.;
Torvik, Vetle I.;
Bischoff-Grethe, Amanda;
Burhans, Lauren B.;
Gabriel, Michael;
Homayouni, Ramin;
Kashef, Alireza;
Martone, Maryann E.;
Perkins, Guy A.;
Price, Diana L.;
Talk, Andrew C.;
West, Ruth

Publication type:

Article

Gene Tree Labeling Using Nonnegative Matrix Factorization on Biomedical Literature.

Published in:

Computational Intelligence & Neuroscience, 2008, p. 1, doi. 10.1155/2008/276535

By:

Heinrich, Kevin E.;
Berry, Michael W.;
Homayouni, Ramin

Publication type:

Article

Paradoxical experiences of healthcare workers during COVID-19: a qualitative analysis of anonymous, web-based, audio narratives.

Published in:

International Journal of Qualitative Studies on Health & Well-Being, 2023, v. 18, n. 1, p. 1, doi. 10.1080/17482631.2023.2184034

By:

Lackman Zeman, Lori;
Roy, Sujoy;
Surnis, Pranjali P.;
Wasserman, Jason Adam;
Duchak, Kathleen;
Homayouni, Ramin;
Mulhem, Elie

Publication type:

Article

Gene clustering by Latent Semantic Indexing of MEDLINE abstracts.

Published in:

Bioinformatics, 2005, v. 21, n. 1, p. 104, doi. 10.1093/bioinformatics/bth464

By:

Ramin Homayouni;
Kevin Heinrich;
Lai Wei;
Michael W. Berry

Publication type:

Article

Dab2IP Regulates Neuronal Positioning, Rap1 Activity and Integrin Signaling in the Developing Cortex.

Published in:

Developmental Neuroscience, 2015, v. 37, n. 2, p. 131, doi. 10.1159/000369092

By:

Qiao, Shuhong;
Homayouni, Ramin

Publication type:

Article

Demystifying Online Genetic Databases.

Published in:

Nursing & Health Sciences, 2006, v. 8, n. 2, p. 125, doi. 10.1111/j.1442-2018.2006.00272_2.x

By:

Driscoll, Carolyn;
Cashion, Anne;
Conley, Yvette;
Homayouni, Ramin;
Lijing Xu

Publication type:

Article

Pilot Study Examining the Utility of Microarray Data to Identify Genes Associated with Weight in Transplant Recipients.

Published in:

Nursing & Health Sciences, 2006, v. 8, n. 2, p. 125, doi. 10.1111/j.1442-2018.2006.00272_3.x

By:

Cashion, Ann;
Driscoll, Carolyn;
Conley, Yvette;
Lijing Xu;
Mandrell, Belinda;
Homayouni, Ramin

Publication type:

Article

Not so mild: emergency department utilization after index COVID infection stratified by disease severity.

Published in:

2023

By:

Bastani, Aveh;
Homayouni, Ramin;
Heinrich, Kevin;
Nair, Girish Balachandran

Publication type:

Letter

Evaluation of Sirtuin-3 probe quality and co-expressed genes using literature cohesion.

Published in:

BMC Bioinformatics, 2019, v. 20, p. 1, doi. 10.1186/s12859-019-2621-z

By:

Roy, Sujoy;
Zaman, Kazi I.;
Williams, Robert W.;
Homayouni, Ramin

Publication type:

Article

Proceedings of the 2018 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference.

Published in:

2019

By:

Wren, Jonathan D.;
Doerkson, Robert J.;
Toby, Inimary T.;
Nanduri, Bindu;
Homayouni, Ramin;
Manda, Prashanti;
Thakkar, Shraddha

Publication type:

Conference Paper/Materials

Unstructured Text in EMR Improves Prediction of Death after Surgery in Children.

Published in:

Informatics, 2019, v. 6, n. 1, p. 4, doi. 10.3390/informatics6010004

By:

Akbilgic, Oguz;
Homayouni, Ramin;
Heinrich, Kevin;
Langham, Max Raymond;
Davis, Robert Lowell

Publication type:

Article

NIPSNAP1 deficient mice exhibit altered liver amino acid, lipid and nucleotide metabolism.

Published in:

Metabolomics, 2014, v. 10, n. 2, p. 250, doi. 10.1007/s11306-013-0583-0

By:

Ghoshal, Sarani;
Jones, Lynn;
Homayouni, Ramin

Publication type:

Article

Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Published in:

2017

By:

Wren, Jonathan D.;
Dozmorov, Mikhail G.;
Toby, Inimary;
Nanduri, Bindu;
Homayouni, Ramin;
Manda, Prashanti;
Thakkar, Shraddha

Publication type:

Proceeding

NIPSNAP protein family emerges as a sensor of mitochondrial health.

Published in:

BioEssays, 2021, v. 43, n. 6, p. 1, doi. 10.1002/bies.202100014

By:

Fathi, Esmat;
Yarbro, Jay M.;
Homayouni, Ramin

Publication type:

Article

What Healthcare Workers Told Us about Working through the COVID-19 Pandemic: A Qualitative Analysis of Digital Audio Stories.

Published in:

Journal of Nursing Management, 2023, p. 1, doi. 10.1155/2023/8858475

By:

Grobbel, Claudia;
Lackman Zeman, Lori;
Homayouni, Ramin;
Roy, Sujoy;
Kenney, Floyd E.;
Mulhem, Elie

Publication type:

Article

Literature aided determination of data quality and statistical significance threshold for gene expression studies.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S23

By:

Lijing Xu;
Cheng Cheng;
George, E Olusegun;
Homayouni, Ramin

Publication type:

Article

Prioritization, clustering and functional annotation of MicroRNAs using latent semantic indexing of MEDLINE abstracts.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 131, doi. 10.1186/s12859-016-1223-2

By:

Roy, Sujoy;
Curry, Brandon C.;
Madahian, Behrouz;
Homayouni, Ramin

Publication type:

Article

Proceedings of the 2015 midsouth computational biology and bioinformatics society (MCBIOS) conference.

Published in:

BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S13-S1

By:

Wren, Jonathan D.;
Thakkar, Shraddha;
Homayouni, Ramin;
Johann, Donald J.;
Dozmorov, Mikhail G.

Publication type:

Article

A Bayesian approach for inducing sparsity in generalized linear models with multi-category response.

Published in:

BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S13-S13

By:

Madahian, Behrouz;
Roy, Sujoy;
Bowman, Dale;
Deng, Lih Y.;
Homayouni, Ramin

Publication type:

Article

The Transcription Factor Mrr1p Controls Expression of the MDR1 Efflux Pump and Mediates Multidrug Resistance in Candida albicans.

Published in:

PLoS Pathogens, 2007, v. 3, n. 11, p. e164, doi. 10.1371/journal.ppat.0030164

By:

Morschhäuser, Joachim;
Barker, Katherine S.;
Liu, Teresa T.;
Blaß-Warmuth, Julia;
Homayouni, Ramin;
Rogers, P. David

Publication type:

Article

An efficient Bayesian approach for Gaussian Bayesian network structure learning.

Published in:

Communications in Statistics: Simulation & Computation, 2017, v. 46, n. 7, p. 5070, doi. 10.1080/03610918.2016.1143103

By:

Han, Shengtong;
Zhang, Hongmei;
Homayouni, Ramin;
Karmaus, Wilfried

Publication type:

Article

System dynamics modeling of childhood obesity.

Published in:

2012

By:

Madahian, Behrouz;
Klesges, Robert C.;
Klesges, Lisa;
Homayouni, Ramin

Publication type:

Abstract

Latent Semantic Indexing of PubMed abstracts for identification of transcription factor candidates from microarray derived gene sets.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-12-S10-S19

By:

Roy, Sujoy;
Heinrich, Kevin;
Phan, Vinhthuy;
Berry, Michael W.;
Homayouni, Ramin

Publication type:

Article

ColonyTrak: a web tool and database system for managing experimental animal models.

Published in:

2011

By:

Vadlamudi, Laasya;
Jones, Lynn A.;
Homayouni, Ramin

Publication type:

Abstract

Proceedings of the Tenth Annual UT-ORNL-KBRIN Bioinformatics Summit 2011.

Published in:

2011

By:

Rouchka, Eric C.;
Flight, Robert M.;
Homayouni, Ramin

Publication type:

Proceeding

Discovering gene functional relationships using FAUN (Feature Annotation Using Nonnegative matrix factorization).

Published in:

BMC Bioinformatics, 2010, v. 11, p. 1

By:

Tjioe, Elina;
Berry, Michael W.;
Homayouni, Ramin

Publication type:

Article

Slim-Prim: an integrated data system for clinical and translational research.

Published in:

2009

By:

Viangteeravat, Teeradache;
Brooks, Ian;
Vuthipadadon, Somchan;
Huang, Eunice;
Smith, Ebony;
Homayouni, Ramin;
McDonald, Chanchai

Publication type:

Abstract

A systematic study on latent semantic analysis model parameters for mining biomedical literature.

Published in:

2009

By:

Yeasin, Mohammed;
Malempati, Haritha;
Homayouni, Ramin;
Sorower, Mohammad Shahed

Publication type:

Abstract

LSI based framework to predict gene regulatory information.

Published in:

2009

By:

Roy, Sujoy;
Lijing Xu;
Homayouni, Ramin

Publication type:

Abstract

Using a literature-based NMF model for discovering gene functional relationships.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S7-P1

By:

Tjioe, Elina;
Berry, Michael;
Homayouni, Ramin;
Heinrich, Kevin

Publication type:

Article

Memphis FitKids: implementing a mobile-friendly web-based application to enhance parents' participation in improving child health.

Published in:

2018

By:

Ullmann, Gerhild;
Kedia, Satish K.;
Homayouni, Ramin;
Akkus, Cem;
Schmidt, Michael;
Klesges, Lisa M.;
Ward, Kenneth D.

Publication type:

journal article

A Pilot Study of Demographic and Dopaminergic Genetic Contributions to Weight Change in Kidney Transplant Recipients.

Published in:

PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0138885

By:

Stanfill, Ansley;
Hathaway, Donna;
Cashion, Ann;
Homayouni, Ramin;
Cowan, Patricia;
Thompson, Carol;
Madahian, Behrouz;
Conley, Yvette

Publication type:

Article

Functionally Enigmatic Genes: A Case Study of the Brain Ignorome.

Published in:

PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0088889

By:

Pandey, Ashutosh K.;
Lu, Lu;
Wang, Xusheng;
Homayouni, Ramin;
Williams, Robert W.

Publication type:

Article

Expression Levels of Obesity-Related Genes Are Associated with Weight Change in Kidney Transplant Recipients.

Published in:

PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0059962

By:

Cashion, Ann;
Stanfill, Ansley;
Thomas, Fridtjof;
Xu, Lijing;
Sutter, Thomas;
Eason, James;
Ensell, Mang;
Homayouni, Ramin

Publication type:

Article

Dab2IP GTPase Activating Protein Regulates Dendrite Development and Synapse Number in Cerebellum.

Published in:

PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0053635

By:

Shuhong Qiao;
Sun-Hong Kim;
Heck, Detlef;
Goldowitz, Daniel;
LeDoux, Mark S.;
Homayouni, Ramin;
Dunaevsky, Anna

Publication type:

Article

Dab2ip Regulates Neuronal Migration and Neurite Outgrowth in the Developing Neocortex.

Published in:

PLoS ONE, 2012, v. 7, n. 10, p. 1, doi. 10.1371/journal.pone.0046592

By:

Gum Hwa Lee;
Sun Hong Kim;
Homayouni, Ramin;
D'Arcangelo, Gabriella;
Silver, Debra L.

Publication type:

Article

miR-BAG: Bagging Based Identification of MicroRNA Precursors.

Published in:

PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0045782

By:

Jha, Ashwani;
Chauhan, Rohit;
Mehra, Mrigaya;
Singh, Heikham Russiachand;
Shankar, Ravi;
Homayouni, Ramin

Publication type:

Article

Developing a Gene Expression Model for Predicting Ventilator-Associated Pneumonia in Trauma Patients: A Pilot Study.

Published in:

PLoS ONE, 2012, v. 7, n. 8, p. 1, doi. 10.1371/journal.pone.0042065

By:

Swanson, Joseph M.;
Wood, G. Christopher;
Lijing Xu;
Tang, Lisa E.;
Meibohm, Bernd;
Homayouni, Ramin;
Croce, Martin A.;
Fabian, Timothy C.;
Pan.-Chyr Yang

Publication type:

Article

Functional Cohesion of Gene Sets Determined by Latent Semantic Indexing of PubMed Abstracts.

Published in:

PLoS ONE, 2011, v. 6, n. 4, p. 1, doi. 10.1371/journal.pone.0018851

By:

Lijing Xu;
Furlotte, Nicholas;
Yunyue Lin;
Heinrich, Kevin;
Berry, Michael W.;
George, Ebenezer O.;
Homayouni, Ramin

Publication type:

Article

The Creatine Kinase/Creatine Connection to Alzheimer's Disease: CK Inactivation, APP-CK Complexes, and Focal Creatine Deposits.

Published in:

Journal of Biomedicine & Biotechnology, 2006, p. 1, doi. 10.1155/JBB/2006/35936

By:

Bürklen, Tanja S.;
Schlattner, Uwe;
Homayouni, Ramin;
Gough, Kathleen;
Rak, Margaret;
Szeghalmi, Adriana;
Wallimann, Theo

Publication type:

Article