Works by Holt, Kathryn E.

Results: 105

The inflated mitochondrial genomes of siphonous green algae reflect processes driving expansion of noncoding DNA and proliferation of introns.
Published in:
PeerJ, 2020, p. 1, doi. 10.7717/peerj.8273
By:
- Repetti, Sonja I.;
- Jackson, Christopher J.;
- Judd, Louise M.;
- Wick, Ryan R.;
- Holt, Kathryn E.;
- Verbruggen, Heroen
Publication type:
Article
Beginner's guide to comparative bacterial genome analysis using next-generation sequence data.
Published in:
Microbial Informatics & Experimentation, 2013, v. 3, n. 1, p. 1, doi. 10.1186/2042-5783-3-2
By:
- Edwards, David J.;
- Holt, Kathryn E.
Publication type:
Article
Laboratory and molecular surveillance of paediatric typhoidal Salmonella in Nepal: Antimicrobial resistance and implications for vaccine policy.
Published in:
PLoS Neglected Tropical Diseases, 2018, v. 12, n. 3, p. 1, doi. 10.1371/journal.pntd.0006408
By:
- Britto, Carl D.;
- Dyson, Zoe A.;
- Duchene, Sebastian;
- Carter, Michael J.;
- Gurung, Meeru;
- Kelly, Dominic F.;
- Murdoch, David R.;
- Ansari, Imran;
- Thorson, Stephen;
- Shrestha, Shrijana;
- Adhikari, Neelam;
- Dougan, Gordon;
- Holt, Kathryn E.;
- Pollard, Andrew J.
Publication type:
Article
Empirical ways to identify novel Bedaquiline resistance mutations in AtpE.
Published in:
PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0217169
By:
- Karmakar, Malancha;
- Rodrigues, Carlos H. M.;
- Holt, Kathryn E.;
- Dunstan, Sarah J.;
- Denholm, Justin;
- Ascher, David B.
Publication type:
Article
Shigella Serotypes Associated With Carriage in Humans Establish Persistent Infection in Zebrafish.
Published in:
Journal of Infectious Diseases, 2023, v. 228, n. 8, p. 1108, doi. 10.1093/infdis/jiad326
By:
- Torraca, Vincenzo;
- Brokatzky, Dominik;
- Miles, Sydney L;
- Chong, Charlotte E;
- Silva, P Malaka De;
- Baker, Stephen;
- Jenkins, Claire;
- Holt, Kathryn E;
- Baker, Kate S;
- Mostowy, Serge
Publication type:
Article
Five Years of GenoTyphi: Updates to the Global Salmonella Typhi Genotyping Framework.
Published in:
2021
By:
- Dyson, Zoe A;
- Holt, Kathryn E
Publication type:
journal article
Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae.
Published in:
PLoS Genetics, 2019, v. 15, n. 4, p. 1, doi. 10.1371/journal.pgen.1008114
By:
- Wyres, Kelly L.;
- Wick, Ryan R.;
- Judd, Louise M.;
- Froumine, Roni;
- Tokolyi, Alex;
- Gorrie, Claire L.;
- Lam, Margaret M. C.;
- Duchêne, Sebastián;
- Jenney, Adam;
- Holt, Kathryn E.
Publication type:
Article
Deepbinner: Demultiplexing barcoded Oxford Nanopore reads with deep convolutional neural networks.
Published in:
PLoS Computational Biology, 2018, v. 14, n. 11, p. 1, doi. 10.1371/journal.pcbi.1006583
By:
- Wick, Ryan R.;
- Judd, Louise M.;
- Holt, Kathryn E.
Publication type:
Article
Are Escherichia coli Pathotypes Still Relevant in the Era of Whole-Genome Sequencing?
Published in:
Frontiers in Cellular & Infection Microbiology, 2016, v. 6, p. 1, doi. 10.3389/fcimb.2016.00141
By:
- Robins-Browne, Roy M.;
- Holt, Kathryn E.;
- Ingle, Danielle J.;
- Hocking, Dianna M.;
- Ji Yang;
- Tauschek, Marija
Publication type:
Article
Novel Subclone of Carbapenem-Resistant Klebsiella pneumoniae Sequence Type 11 with Enhanced Virulence and Transmissibility, China.
Published in:
2020
By:
- Kai Zhou;
- Tingting Xiao;
- David, Sophia;
- Qin Wang;
- Yanzi Zhou;
- Lihua Guo;
- Aanensen, David;
- Holt, Kathryn E.;
- Thomson, Nicholas R.;
- Grundmann, Hajo;
- Ping Shen;
- Yonghong Xiao;
- Zhou, Kai;
- Xiao, Tingting;
- Wang, Qin;
- Zhou, Yanzi;
- Guo, Lihua;
- Shen, Ping;
- Xiao, Yonghong
Publication type:
journal article
Performance of neural network basecalling tools for Oxford Nanopore sequencing.
Published in:
Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1727-y
By:
- Wick, Ryan R.;
- Judd, Louise M.;
- Holt, Kathryn E.
Publication type:
Article
A Salmonella Typhimurium-Typhi Genomic Chimera: A Model to Study Vi Polysaccharide Capsule Function In Vivo.
Published in:
PLoS Pathogens, 2011, v. 7, n. 7, p. 1, doi. 10.1371/journal.ppat.1002131
By:
- Jansen, Angela M.;
- Hall, Lindsay J.;
- Clare, Simon;
- Goulding, David;
- Holt, Kathryn E.;
- Grant, Andrew J.;
- Mastroeni, Piero;
- Dougan, Gordon;
- Kingsley, Robert A.
Publication type:
Article
Assembling the perfect bacterial genome using Oxford Nanopore and Illumina sequencing.
Published in:
PLoS Computational Biology, 2023, v. 19, n. 3, p. 1, doi. 10.1371/journal.pcbi.1010905
By:
- Wick, Ryan R.;
- Judd, Louise M.;
- Holt, Kathryn E.
Publication type:
Article
Carbapenem and amikacin resistance on a large conjugative Acinetobacter baumannii plasmid.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2015, v. 70, n. 4, p. 1259, doi. 10.1093/jac/dku486
By:
- Nigro, Steven J.;
- Holt, Kathryn E.;
- Pickard, Derek;
- Hall, Ruth M.
Publication type:
Article
A type 2 A/C<sub>2</sub> plasmid carrying the aacC4 apramycin resistance gene and the erm(42) erythromycin resistance gene recovered from two Salmonella enterica serovars.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2015, v. 70, n. 4, p. 1021, doi. 10.1093/jac/dku489
By:
- Harmer, Christopher J.;
- Holt, Kathryn E.;
- Hall, Ruth M.
Publication type:
Article
The complete sequence of Salmonella genomic island SGI2.
Published in:
2015
By:
- Hamidian, Mohammad;
- Holt, Kathryn E;
- Hall, Ruth M
Publication type:
Journal Article
The complete sequence of Salmonella genomic island SGI1-K.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2015, v. 70, n. 1, p. 305, doi. 10.1093/jac/dku331
By:
- Hamidian, Mohammad;
- Holt, Kathryn E.;
- Hall, Ruth M.
Publication type:
Article
A conjugative plasmid carrying the carbapenem resistance gene blaOXA-23 in AbaR4 in an extensively resistant GC1 Acinetobacter baumannii isolate.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2014, v. 69, n. 10, p. 2625, doi. 10.1093/jac/dku188
By:
- Hamidian, Mohammad;
- Kenyon, Johanna J.;
- Holt, Kathryn E.;
- Pickard, Derek;
- Hall, Ruth M.
Publication type:
Article
A GC1 Acinetobacter baumannii isolate carrying AbaR3 and the aminoglycoside resistance transposon TnaphA6 in a conjugative plasmid.
Published in:
2014
By:
- Hamidian, Mohammad;
- Holt, Kathryn E;
- Pickard, Derek;
- Dougan, Gordon;
- Hall, Ruth M
Publication type:
journal article
A GC1 Acinetobacter baumannii isolate carrying AbaR3 and the aminoglycoside resistance transposon TnaphA6 in a conjugative plasmid.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2014, v. 69, n. 4, p. 955, doi. 10.1093/jac/dkt454
By:
- Hamidian, Mohammad;
- Holt, Kathryn E.;
- Pickard, Derek;
- Dougan, Gordon;
- Hall, Ruth M.
Publication type:
Article
Identification of a marker for two lineages within the GC1 clone of Acinetobacter baumannii.
Published in:
2014
By:
- Hamidian, Mohammad;
- Wynn, Matthew;
- Holt, Kathryn E.;
- Pickard, Derek;
- Dougan, Gordon;
- Hall, Ruth M.
Publication type:
Letter
A multiplex single nucleotide polymorphism typing assay for detecting mutations that result in decreased fluoroquinolone susceptibility in Salmonella enterica serovars Typhi and Paratyphi A.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2010, v. 65, n. 8, p. 1631, doi. 10.1093/jac/dkq175
By:
- Yajun Song;
- Roumagnac, Philippe;
- Weill, François-Xavier;
- Wain, John;
- Dolecek, Christiane;
- Mazzoni, Camila J.;
- Holt, Kathryn E.;
- Achtman, Mark
Publication type:
Article
FastSpar: rapid and scalable correlation estimation for compositional data.
Published in:
Bioinformatics, 2019, v. 35, n. 6, p. 1064, doi. 10.1093/bioinformatics/bty734
By:
- Watts, Stephen C;
- Ritchie, Scott C;
- Inouye, Michael;
- Holt, Kathryn E
Publication type:
Article
Bandage: interactive visualization of de novo genome assemblies.
Published in:
Bioinformatics, 2015, v. 31, n. 20, p. 3350, doi. 10.1093/bioinformatics/btv383
By:
- Wick, Ryan R.;
- Schultz, Mark B.;
- Zobel, Justin;
- Holt, Kathryn E.
Publication type:
Article
Unlocking the Potential of Genomic Data to Inform Typhoid Fever Control Policy: Supportive Resources for Genomic Data Generation, Analysis, and Visualization.
Published in:
Open Forum Infectious Diseases, 2023, v. 10, p. S38, doi. 10.1093/ofid/ofad044
By:
- Carey, Megan E;
- Dyson, Zoe A;
- Argimón, Silvia;
- Cerdeira, Louise;
- Yeats, Corin;
- Aanensen, David;
- Mboowa, Gerald;
- Baker, Stephen;
- Tessema, Sofonias K;
- Smith, Anthony M;
- Okeke, Iruka N;
- Holt, Kathryn E
Publication type:
Article
Genomic dissection of Klebsiella pneumoniae infections in hospital patients reveals insights into an opportunistic pathogen.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30717-6
By:
- Gorrie, Claire L.;
- Mirčeta, Mirjana;
- Wick, Ryan R.;
- Judd, Louise M.;
- Lam, Margaret M. C.;
- Gomi, Ryota;
- Abbott, Iain J.;
- Thomson, Nicholas R.;
- Strugnell, Richard A.;
- Pratt, Nigel F.;
- Garlick, Jill S.;
- Watson, Kerrie M.;
- Hunter, Peter C.;
- Pilcher, David V.;
- McGloughlin, Steve A.;
- Spelman, Denis W.;
- Wyres, Kelly L.;
- Jenney, Adam W. J.;
- Holt, Kathryn E.
Publication type:
Article
Extensive Capsule Locus Variation and Large-Scale Genomic Recombination within the Klebsiella pneumoniae Clonal Group 258.
Published in:
Genome Biology & Evolution, 2015, v. 7, n. 5, p. 1267, doi. 10.1093/gbe/evv062
By:
- Wyres, Kelly L.;
- Gorrie, Claire;
- Edwards, David J.;
- Wertheim, Heiman F. L.;
- Li Yang Hsu;
- Nguyen Van Kinh;
- Zadoks, Ruth;
- Baker, Stephen;
- Holt, Kathryn E.
Publication type:
Article
Adaptive Change Inferred from Genomic Population Analysis of the ST93 Epidemic Clone of Community-Associated Methicillin-Resistant Staphylococcus aureus.
Published in:
Genome Biology & Evolution, 2014, v. 6, n. 2, p. 366, doi. 10.1093/gbe/evu022
By:
- Stinear, Timothy P.;
- Holt, Kathryn E.;
- Kyra Chua;
- Stepnell, Justin;
- Tuck, Kellie L.;
- Coombs, Geoffrey;
- Harrison, Paul Francis;
- Seemann, Torsten;
- Howden, Benjamin P.
Publication type:
Article
Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers.
Published in:
PLoS Neglected Tropical Diseases, 2019, v. 13, n. 9, p. 1, doi. 10.1371/journal.pntd.0007620
By:
- Ingle, Danielle J.;
- Nair, Satheesh;
- Hartman, Hassan;
- Ashton, Philip M.;
- Dyson, Zoe A.;
- Day, Martin;
- Freedman, Joanne;
- Chattaway, Marie A.;
- Holt, Kathryn E.;
- Dallman, Timothy J.
Publication type:
Article
Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia.
Published in:
BMC Infectious Diseases, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12879-022-07687-7
By:
- Stewart, James;
- Judd, Louise M.;
- Jenney, Adam;
- Holt, Kathryn E.;
- Wyres, Kelly L.;
- Hawkey, Jane
Publication type:
Article
ISMapper: identifying transposase insertion sites in bacterial genomes from short read sequence data.
Published in:
BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1860-2
By:
- Hawkey, Jane;
- Hamidian, Mohammad;
- Wick, Ryan R.;
- Edwards, David J.;
- Billman-Jacobe, Helen;
- Hall, Ruth M.;
- Holt, Kathryn E.
Publication type:
Article
ISMapper: identifying transposase insertion sites in bacterial genomes from short read sequence data.
Published in:
BMC Genomics, 2015, v. 16, n. 1, p. 667, doi. 10.1186/s12864-015-1860-2
By:
- Hawkey, Jane;
- Hamidian, Mohammad;
- Wick, Ryan R.;
- Edwards, David J.;
- Billman-Jacobe, Helen;
- Hall, Ruth M.;
- Holt, Kathryn E.
Publication type:
Article
Evidence of microevolution of Salmonella Typhimurium during a series of egg-associated outbreaks linked to a single chicken farm.
Published in:
BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-800
By:
- Hawkey, Jane;
- Edwards, David J.;
- Dimovski, Karolina;
- Hiley, Lester;
- Billman-Jacobe, Helen;
- Hogg, Geoff;
- Holt, Kathryn E.
Publication type:
Article
Short read sequence typing (SRST): multi-locus sequence types from short reads.
Published in:
BMC Genomics, 2012, v. 13, n. 1, p. 338, doi. 10.1186/1471-2164-13-338
By:
- Inouye, Michael;
- Conway, Thomas C.;
- Zobel, Justin;
- Holt, Kathryn E.
Publication type:
Article
On the origin of Mycobacterium ulcerans, the causative agent of Buruli ulcer.
Published in:
BMC Genomics, 2012, v. 13, n. 1, p. 258, doi. 10.1186/1471-2164-13-258
By:
- Doig, Kenneth D.;
- Holt, Kathryn E.;
- Fyfe, Janet A. M.;
- Lavender, Caroline J.;
- Eddyani, Miriam;
- Portaels, Franï¿½oise;
- Yeboah-Manu, Dorothy;
- Pluschke, Gerd;
- Seemann, Torsten;
- Stinear, Timothy P.
Publication type:
Article
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.
Published in:
PLoS Computational Biology, 2017, v. 13, n. 6, p. 1, doi. 10.1371/journal.pcbi.1005595
By:
- Wick, Ryan R.;
- Judd, Louise M.;
- Gorrie, Claire L.;
- Holt, Kathryn E.
Publication type:
Article
Z/I1 Hybrid Virulence Plasmids Carrying Antimicrobial Resistance genes in S. Typhimurium from Australian Food Animal Production.
Published in:
Microorganisms, 2019, v. 7, n. 9, p. 299, doi. 10.3390/microorganisms7090299
By:
- Wyrsch, Ethan R.;
- Hawkey, Jane;
- Judd, Louise M.;
- Haites, Ruth;
- Holt, Kathryn E.;
- Djordjevic, Steven P.;
- Billman-Jacobe, Helen
Publication type:
Article
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid.
Published in:
Nature Communications, 2016, v. 7, n. 10, p. 12827, doi. 10.1038/ncomms12827
By:
- Wong, Vanessa K.;
- Baker, Stephen;
- Connor, Thomas R.;
- Pickard, Derek;
- Page, Andrew J.;
- Dave, Jayshree;
- Murphy, Niamh;
- Holliman, Richard;
- Sefton, Armine;
- Millar, Michael;
- Dyson, Zoe A.;
- Dougan, Gordon;
- Holt, Kathryn E.
Publication type:
Article
Protection conferred by typhoid fever against recurrent typhoid fever in urban Kolkata.
Published in:
PLoS Neglected Tropical Diseases, 2020, v. 14, n. 8, p. 1, doi. 10.1371/journal.pntd.0008530
By:
- Im, Justin;
- Islam, Md. Taufiqul;
- Kim, Deok Ryun;
- Ahmmed, Faisal;
- Chon, Yun;
- Zaman, K.;
- Khan, Ashraful Islam;
- Ali, Mohammad;
- Sur, Dipika;
- Kanungo, Suman;
- Dutta, Shanta;
- Bhattacharya, Sujit K.;
- Dougan, Gordon;
- Holt, Kathryn E.;
- Marks, Florian;
- Kim, Jerome H.;
- Qadri, Firdausi;
- Clemens, John D.
Publication type:
Article
Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016.
Published in:
PLoS Neglected Tropical Diseases, 2020, v. 14, n. 2, p. 1, doi. 10.1371/journal.pntd.0008036
By:
- Rahman, Sadia Isfat Ara;
- Dyson, Zoe A.;
- Klemm, Elizabeth J.;
- Khanam, Farhana;
- Holt, Kathryn E.;
- Chowdhury, Emran Kabir;
- Dougan, Gordon;
- Qadri, Firdausi
Publication type:
Article
GeneMates: an R package for detecting horizontal gene co-transfer between bacteria using gene-gene associations controlled for population structure.
Published in:
BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07019-6
By:
- Wan, Yu;
- Wick, Ryan R.;
- Zobel, Justin;
- Ingle, Danielle J.;
- Inouye, Michael;
- Holt, Kathryn E.
Publication type:
Article
Cross-validation to select Bayesian hierarchical models in phylogenetics.
Published in:
BMC Evolutionary Biology, 2016, v. 16, p. 1, doi. 10.1186/s12862-016-0688-y
By:
- Duchêne, Sebastián;
- Duchêne, David A.;
- Di Giallonardo, Francesca;
- Eden, John-Sebastian;
- Geoghegan, Jemma L.;
- Holt, Kathryn E.;
- Ho, Simon Y. W.;
- Holmes, Edward C.
Publication type:
Article
Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination.
Published in:
Nature Communications, 2018, v. 9, p. 1, doi. 10.1038/s41467-018-05114-7
By:
- Lam, Margaret M. C.;
- Wyres, Kelly L.;
- Duchêne, Sebastian;
- Wick, Ryan R.;
- Judd, Louise M.;
- Yunn-Hwen Gan;
- Chu-Han Hoh;
- Archuleta, Sophia;
- Molton, James S.;
- Kalimuddin, Shirin;
- Tse Hsien Koh;
- Passet, Virginie;
- Brisse, Sylvain;
- Holt, Kathryn E.
Publication type:
Article
High-Resolution Genotyping of the Endemic Salmonella Typhi Population during a Vi (Typhoid) Vaccination Trial in Kolkata.
Published in:
PLoS Neglected Tropical Diseases, 2012, v. 6, n. 1, p. 1, doi. 10.1371/journal.pntd.0001490
By:
- Holt, Kathryn E.;
- Dutta, Shanta;
- Manna, Byomkesh;
- Bhattacharya, Sujit K.;
- Bhaduri, Barnali;
- Pickard, Derek J.;
- Ochiai, R. Leon;
- Ali, Mohammad;
- Clemens, John D.;
- Dougan, Gordon
Publication type:
Article
High-Resolution Genotyping of the Endemic Salmonella Typhi Population during a Vi (Typhoid) Vaccination Trial in Kolkata.
Published in:
PLoS Neglected Tropical Diseases, 2012, v. 6, n. 1, p. 1, doi. 10.1371/journal.pntd.0001490
By:
- Holt, Kathryn E.;
- Dutta, Shanta;
- Manna, Byomkesh;
- Bhattacharya, Sujit K.;
- Bhaduri, Barnali;
- Pickard, Derek J.;
- Ochiai, R. Leon;
- Ali, Mohammad;
- Clemens, John D.;
- Dougan, Gordon
Publication type:
Article
Emergence of a Globally Dominant IncHI1 Plasmid Type Associated with Multiple Drug Resistant Typhoid.
Published in:
PLoS Neglected Tropical Diseases, 2011, v. 5, n. 7, p. 1, doi. 10.1371/journal.pntd.0001245
By:
- Holt, Kathryn E.;
- Phan, Minh Duy;
- Baker, Stephen;
- Duy, Pham Thanh;
- Nga, Tran Vu Thieu;
- Nair, Satheesh;
- Turner, A. Keith;
- Walsh, Ciara;
- Fanning, Séamus;
- Farrell-Ward, Sinéad;
- Dutta, Shanta;
- Kariuki, Sam;
- Weill, François-Xavier;
- Parkhill, Julian;
- Dougan, Gordon;
- Wain, John
Publication type:
Article
Emergence of a Globally Dominant IncHI1 Plasmid Type Associated with Multiple Drug Resistant Typhoid.
Published in:
PLoS Neglected Tropical Diseases, 2011, v. 5, n. 7, p. 1, doi. 10.1371/journal.pntd.0001245
By:
- Holt, Kathryn E.;
- Phan, Minh Duy;
- Baker, Stephen;
- Duy, Pham Thanh;
- Nga, Tran Vu Thieu;
- Nair, Satheesh;
- Keith Turner, A.;
- Walsh, Ciara;
- Fanning, Séamus;
- Farrell-Ward, Sinéad;
- Dutta, Shanta;
- Kariuki, Sam;
- Weill, François-Xavier;
- Parkhill, Julian;
- Dougan, Gordon;
- Wain, John
Publication type:
Article
Temporal Fluctuation of Multidrug Resistant Salmonella Typhi Haplotypes in the Mekong River Delta Region of Vietnam.
Published in:
PLoS Neglected Tropical Diseases, 2011, v. 5, n. 1, p. 1, doi. 10.1371/journal.pntd.0000929
By:
- Holt, Kathryn E.;
- Dolecek, Christiane;
- Chau, Tran Thuy;
- Duy, Pham Thanh;
- La, Tran Thi Phi;
- Hoang, Nguyen Van Minh;
- Nga, Tran Vu Thieu;
- Campbell, James I.;
- Manh, Bui Huu;
- Vinh Chau, Nguyen Van;
- Hien, Tran Tinh;
- Farrar, Jeremy;
- Dougan, Gordon;
- Baker, Stephen
Publication type:
Article
An Outpatient, Ambulant-Design, Controlled Human Infection Model Using Escalating Doses of Salmonella Typhi Challenge Delivered in Sodium Bicarbonate Solution.
Published in:
Clinical Infectious Diseases, 2014, v. 58, n. 9, p. 1230, doi. 10.1093/cid/ciu078
By:
- Waddington, Claire S.;
- Darton, Thomas C.;
- Jones, Claire;
- Haworth, Kathryn;
- Peters, Anna;
- John, Tessa;
- Thompson, Ben A. V.;
- Kerridge, Simon A.;
- Kingsley, Robert A.;
- Zhou, Liqing;
- Holt, Kathryn E.;
- Yu, Ly-Mee;
- Lockhart, Stephen;
- Farrar, Jeremy J.;
- Sztein, Marcelo B.;
- Dougan, Gordon;
- Angus, Brian;
- Levine, Myron M.;
- Pollard, Andrew J.
Publication type:
Article
ModuleFinder and CoReg: alternative tools for linking gene expression modules with promoter sequences motifs to uncover gene regulation mechanisms in plants.
Published in:
Plant Methods, 2006, v. 2, p. 1, doi. 10.1186/1746-4811-2-8
By:
- Holt, Kathryn E.;
- Millar, A. Harvey;
- Whelan, James
Publication type:
Article