Works by Hofreiter, Michael

Results: 125

Revisiting Aurochs Haplogroup C: Paleogenomic Perspectives from Northeastern China.

Published in:

Genes, 2025, v. 16, n. 6, p. 639, doi. 10.3390/genes16060639

By:

Zhu, Yan;
Hou, Xindong;
Zhao, Jian;
Xiao, Bo;
Song, Shiwen;
Zou, Xinzhe;
Liu, Sizhao;
Hofreiter, Michael;
Lai, Xulong

Publication type:

Article

Genomic DNA Sequences from Mastodon and Woolly Mammoth Reveal Deep Speciation of Forest and Savanna Elephants.

Published in:

PLoS Biology, 2010, v. 8, n. 12, p. 1, doi. 10.1371/journal.pbio.1000564

By:

Rohland, Nadin;
Reich, David;
Mallick, Swapan;
Meyer, Matthias;
Green, Richard E.;
Georgiadis, Nicholas J.;
Roca, Alfred L.;
Hofreiter, Michael

Publication type:

Article

Proboscidean Mitogenomics: Chronology and Mode of Elephant Evolution Using Mastodon as Outgroup.

Published in:

PLoS Biology, 2007, v. 5, n. 8, p. 1663, doi. 10.1371/journal.pbio.0050207

By:

Rohland, Nadin;
Malaspinas, Anna-Sapfo;
Pollack, Joshua L.;
Slatkin, Montgomery;
Matheus, Paul;
Hofreiter, Michael

Publication type:

Article

No Evidence of Neandertal mtDNA Contribution to Early Modern Humans.

Published in:

PLoS Biology, 2004, v. 2, n. 3, p. 1, doi. 10.1371/journal.pbio.0020057

By:

Serre, David;
Langaney, André;
Chech, Mario;
Teschler-Nicola, Maria;
Paunovic, Maja;
Mennecier, Philippe;
Hofreiter, Michael;
Possnert, Göran;
Pääbo, Svante

Publication type:

Article

No Evidence of Neandertal mtDNA Contribution to Early Modern Humans.

Published in:

PLoS Biology, 2004, v. 2, n. 3, p. 313

By:

Teschler-Nicola, Maria;
Serre, David;
Chech, Mario;
Mennecier, Philippe;
Hofreiter, Michael;
Possnert, Göran;
Pääbo, Svante;
Langaney, André;
Paunovic, Maja

Publication type:

Article

The Population History of Extant and Extinct Hyenas.

Published in:

Molecular Biology & Evolution, 2005, v. 22, n. 12, p. 2435, doi. 10.1093/molbev/msi244

By:

Rohland, Nadin;
Pollack, Joshua L.;
Nagel, Doris;
Beauval, Cédric;
Airvaux, Jean;
Pääbo, Svante;
Hofreiter, Michael

Publication type:

Article

Ancient DNA Analyses Reveal High Mitochondrial DNA Sequence Diversity and Parallel Morphological Evolution of Late Pleistocene Cave Bears.

Published in:

Molecular Biology & Evolution, 2002, v. 19, n. 8, p. 1244, doi. 10.1093/oxfordjournals.molbev.a004185

By:

Hofreiter, Michael;
Capelli, Cristian;
Krings, Matthias;
Waits, Lisette;
Conard, Nicholas;
Münzel, Susanne;
Rabeder, Gernot;
Nagel, Doris;
Paunovic, Maja;
Jambresić, Gordana;
Meyer, Sonja;
Weiss, Gunter;
Pääbo, Svante

Publication type:

Article

Otter shrew mitogenomes (Afrotheria, Potamogalidae) reconstructed from historical museum skins.

Published in:

Mitochondrial DNA: Resources, 2022, v. 7, n. 9, p. 1699, doi. 10.1080/23802359.2022.2122747

By:

Arnold, Patrick;
Hagemann, Justus;
Gilissen, Emmanuel;
Hofreiter, Michael

Publication type:

Article

The complete mitochondrial genome of the common vole, <italic>Microtus arvalis</italic> (Rodentia: Arvicolinae).

Published in:

Mitochondrial DNA: Resources, 2018, v. 3, n. 1, p. 446, doi. 10.1080/23802359.2018.1457994

By:

Folkertsma, Remco;
Westbury, Michael V.;
Eccard, Jana A.;
Hofreiter, Michael

Publication type:

Article

Complete mitochondrial genome of a bat-eared fox (Otocyon megalotis), along with phylogenetic considerations.

Published in:

Mitochondrial DNA: Resources, 2017, v. 2, n. 1, p. 298, doi. 10.1080/23802359.2017.1331325

By:

Westbury, Michael;
Dalerum, Fredrik;
Norén, Karin;
Hofreiter, Michael

Publication type:

Article

Does cooperation mean kinship between spatially discrete ant nests?

Published in:

Ecology & Evolution (20457758), 2016, v. 6, n. 24, p. 8846, doi. 10.1002/ece3.2590

By:

Procter, Duncan S.;
Cottrell, Joan E.;
Watts, Kevin;
A'hara, Stuart W.;
Hofreiter, Michael;
Robinson, Elva J. H.

Publication type:

Article

Improving draft genome contiguity with reference-derived in silico mate-pair libraries.

Published in:

GigaScience, 2018, v. 7, n. 5, p. N.PAG, doi. 10.1093/gigascience/giy029

By:

Grau, José Horacio;
Hackl, Thomas;
Koepfli, Klaus-Peter;
Hofreiter, Michael

Publication type:

Article

Effects of late quaternary climate change on Palearctic shrews.

Published in:

Global Change Biology, 2013, v. 19, n. 6, p. 1865, doi. 10.1111/gcb.12153

By:

Prost, Stefan;
Klietmann, Johannes;
Kolfschoten, Thijs;
Guralnick, Robert P.;
Waltari, Eric;
Vrieling, Klaas;
Stiller, Mathias;
Nagel, Doris;
Rabeder, Gernot;
Hofreiter, Michael;
Sommer, Robert S.

Publication type:

Article

Losing ground: past history and future fate of Arctic small mammals in a changing climate.

Published in:

Global Change Biology, 2013, v. 19, n. 6, p. 1854, doi. 10.1111/gcb.12157

By:

Prost, Stefan;
Guralnick, Robert P.;
Waltari, Eric;
Fedorov, Vadim B.;
Kuzmina, Elena;
Smirnov, Nickolay;
Kolfschoten, Thijs;
Hofreiter, Michael;
Vrieling, Klaas

Publication type:

Article

Genomic adaptation to small population size and saltwater consumption in the critically endangered Cat Ba langur.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52811-7

By:

Zhang, Liye;
Leonard, Neahga;
Passaro, Rick;
Luan, Mai Sy;
Van Tuyen, Pham;
Han, Le Thi Ngoc;
Cam, Nguyen Huy;
Vogelnest, Larry;
Lynch, Michael;
Fine, Amanda E.;
Nga, Nguyen Thi Thanh;
Van Long, Nguyen;
Rawson, Benjamin M.;
Behie, Alison;
Van Nguyen, Truong;
Le, Minh D.;
Nadler, Tilo;
Walter, Lutz;
Marques-Bonet, Tomas;
Hofreiter, Michael

Publication type:

Article

Annotated genome sequences of the carnivorous plant Roridula gorgonias and a non-carnivorous relative, Clethra arborea.

Published in:

BMC Research Notes, 2020, v. 13, n. 1, p. N.PAG, doi. 10.1186/s13104-020-05254-4

By:

Hartmann, Stefanie;
Preick, Michaela;
Abelt, Silke;
Scheffel, André;
Hofreiter, Michael

Publication type:

Article

Correction: Insight into the introduction of domestic cattle and the process of Neolithization to the Spanish region Galicia by genetic evidence.

Published in:

2022

By:

Gurke, Marie;
Vidal-Gorosquieta, Amalia;
Paijmans, Johanna L. A.;
Wȩcek, Karolina;
Barlow, Axel;
González-Fortes, Gloria;
Hartmann, Stefanie;
Grandal-d'Anglade, Aurora;
Hofreiter, Michael

Publication type:

Correction Notice

A preliminary assessment of the diversity in the frog genus Anilany (Microhylidae: Cophylinae) with description of a new species from western Madagascar.

Published in:

Salamandra, 2025, v. 61, n. 1, p. 70

By:

PETZOLD, ALICE;
GLAW, FRANK;
MULLIN, KATHERINE E.;
RAKOTOARISON, ANDOLALAO;
RASELIMANANA, ACHILLE P.;
CROTTINI, ANGELICA;
WENGEL, PABLO OROZCO-TER;
KÖHLER, JÖRN;
PRÖTZEL, DAVID;
VENCES, MIGUEL;
HOFREITER, MICHAEL;
SCHERZ, MARK D.

Publication type:

Article

DNA sequencing: Mammoth genomics.

Published in:

Nature, 2008, v. 456, n. 7220, p. 330, doi. 10.1038/456330a

By:

Hofreiter, Michael

Publication type:

Article

Multiplex amplification of the mammoth mitochondrial genome and the evolution of Elephantidae.

Published in:

Nature, 2006, v. 439, n. 7077, p. 724, doi. 10.1038/nature04432

By:

Krause, Johannes;
Dear, Paul H.;
Pollack, Joshua L.;
Slatkin, Montgomery;
Spriggs, Helen;
Barnes, Ian;
Lister, Adrian M.;
Ebersberger, Ingo;
Pääbo, Svante;
Hofreiter, Michael

Publication type:

Article

Shark genome size evolution and its relationship with cellular, life-history, ecological, and diversity traits.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-59202-4

By:

Torralba Sáez, Mario;
Hofreiter, Michael;
Straube, Nicolas

Publication type:

Article

Molecular breeding of polymerases for resistance to environmental inhibitors.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 8, p. e51, doi. 10.1093/nar/gkq1360

By:

Baar, Claudia;
d’Abbadie, Marc;
Vaisman, Alexandra;
Arana, Mercedes E.;
Hofreiter, Michael;
Woodgate, Roger;
Kunkel, Thomas A.;
Holliger, Philipp

Publication type:

Article

Road blocks on paleogenomes—polymerase extension profiling reveals the frequency of blocking lesions in ancient DNA.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 16, p. e161, doi. 10.1093/nar/gkq572

By:

Heyn, Patricia;
Stenzel, Udo;
Briggs, Adrian W.;
Kircher, Martin;
Hofreiter, Michael;
Meyer, Matthias

Publication type:

Article

From micrograms to picograms: quantitative PCR reduces the material demands of high-throughput sequencing.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 1, p. e5, doi. 10.1093/nar/gkm1095

By:

Meyer, Matthias;
Briggs, Adrian W.;
Maricic, Tomislav;
Höber, Barbara;
Höffner, Barbara;
Krause, Johannes;
Weihmann, Antje;
Pääbo, Svante;
Hofreiter, Michael

Publication type:

Article

Targeted high-throughput sequencing of tagged nucleic acid samples.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 15, p. e97, doi. 10.1093/nar/gkm566

By:

Meyer, Matthias;
Stenzel, Udo;
Myles, Sean;
Prüfer, Kay;
Hofreiter, Michael

Publication type:

Article

DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 23, p. 4793, doi. 10.1093/nar/29.23.4793

By:

Hofreiter, Michael;
Jaenicke, Viviane;
Serre, David;
Haeseler, Arndt von;
Pääbo, Svante

Publication type:

Article

Ancestral mitogenome capture of the Southeast Asian banded linsang.

Published in:

PLoS ONE, 2020, v. 15, n. 6, p. 1, doi. 10.1371/journal.pone.0234385

By:

Paijmans, Johanna L. A.;
Barlow, Axel;
Henneberger, Kirstin;
Fickel, Joerns;
Hofreiter, Michael;
Foerster, Daniel W. G.

Publication type:

Article

Phylogeny, diet, and habitat of an extinct ground sloth from Cuchillo Cura´, Neuque´n Province, southwest Argentina

Published in:

Quaternary Research, 2003, v. 59, n. 3, p. 364, doi. 10.1016/S0033-5894(03)00030-9

By:

Hofreiter, Michael;
Betancourt, Julio L.;
Sbriller, Alicia Pelliza;
Markgraf, Vera;
McDonald, H. Gregory

Publication type:

Article

Substitutions in woolly mammoth hemoglobin confer biochemical properties adaptive for cold tolerance.

Published in:

Nature Genetics, 2010, v. 42, n. 6, p. 536, doi. 10.1038/ng.574

By:

Campbell, Kevin L.;
Roberts, Jason E. E.;
Watson, Laura N.;
Stetefeld, Jörg;
Sloan, Angela M.;
Signore, Anthony V.;
Howatt, Jesse W.;
Tame, Jeremy R. H.;
Rohland, Nadin;
Shen, Tong-Jian;
Austin, Jeremy J.;
Hofreiter, Michael;
Chien Ho;
Weber, Roy E.;
Cooper, Alan

Publication type:

Article

Historical biogeography of the leopard (Panthera pardus) and its extinct Eurasian populations.

Published in:

BMC Evolutionary Biology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12862-018-1268-0

By:

Paijmans, Johanna L. A.;
Barlow, Axel;
Förster, Daniel W.;
Henneberger, Kirstin;
Meyer, Matthias;
Nickel, Birgit;
Nagel, Doris;
Worsøe Havmøller, Rasmus;
Baryshnikov, Gennady F.;
Joger, Ulrich;
Rosendahl, Wilfried;
Hofreiter, Michael

Publication type:

Article

A genetically distinct lion ( Panthera leo) population from Ethiopia.

Published in:

European Journal of Wildlife Research, 2013, v. 59, n. 2, p. 215, doi. 10.1007/s10344-012-0668-5

By:

Bruche, Susann;
Gusset, Markus;
Lippold, Sebastian;
Barnett, Ross;
Eulenberger, Klaus;
Junhold, Jörg;
Driscoll, Carlos A.;
Hofreiter, Michael

Publication type:

Article

Mitochondrial Diversity and Distribution of African Green Monkeys ( Chlorocebus Gray, 1870).

Published in:

American Journal of Primatology, 2013, v. 75, n. 4, p. 350, doi. 10.1002/ajp.22113

By:

HAUS, TANJA;
AKOM, EMMANUEL;
AGWANDA, BERNARD;
HOFREITER, MICHAEL;
ROOS, CHRISTIAN;
ZINNER, DIETMAR

Publication type:

Article

Potential Adaptive Introgression From Dogs in Iberian Grey Wolves (Canis lupus).

Published in:

Molecular Ecology, 2025, v. 34, n. 12, p. 1, doi. 10.1111/mec.17639

By:

Sarabia, Carlos;
Salado, Isabel;
Fernández‐Gil, Alberto;
vonHoldt, Bridgett M.;
Hofreiter, Michael;
Vilà, Carles;
Leonard, Jennifer A.

Publication type:

Article

A sliver of the past: The decimation of the genetic diversity of the Mexican wolf.

Published in:

Molecular Ecology, 2021, v. 30, n. 23, p. 6340, doi. 10.1111/mec.16037

By:

Taron, Ulrike H.;
Salado, Isabel;
Escobar‐Rodríguez, Mariana;
Westbury, Michael V.;
Butschkau, Susanne;
Paijmans, Johanna L. A.;
vonHoldt, Bridgett M.;
Hofreiter, Michael;
Leonard, Jennifer A.

Publication type:

Article

Loss of Mitochondrial Genetic Diversity despite Population Growth: The Legacy of Past Wolf Population Declines.

Published in:

Genes, 2023, v. 14, n. 1, p. 75, doi. 10.3390/genes14010075

By:

Salado, Isabel;
Preick, Michaela;
Lupiáñez-Corpas, Natividad;
Fernández-Gil, Alberto;
Vilà, Carles;
Hofreiter, Michael;
Leonard, Jennifer A.

Publication type:

Article

Paleogenomes Reveal a Complex Evolutionary History of Late Pleistocene Bison in Northeastern China.

Published in:

Genes, 2022, v. 13, n. 10, p. N.PAG, doi. 10.3390/genes13101684

By:

Hou, Xindong;
Zhao, Jian;
Zhang, Hucai;
Preick, Michaela;
Hu, Jiaming;
Xiao, Bo;
Wang, Linying;
Deng, Miaoxuan;
Liu, Sizhao;
Chang, Fengqin;
Sheng, Guilian;
Lai, Xulong;
Hofreiter, Michael;
Yuan, Junxia

Publication type:

Article

Evolutionary Divergence and Radula Diversification in Two Ecomorphs from an Adaptive Radiation of Freshwater Snails.

Published in:

Genes, 2022, v. 13, n. 6, p. 1029, doi. 10.3390/genes13061029

By:

Hilgers, Leon;
Hartmann, Stefanie;
Pfaender, Jobst;
Lentge-Maaß, Nora;
Marwoto, Ristiyanti M.;
von Rintelen, Thomas;
Hofreiter, Michael

Publication type:

Article

Diversity and Paleodemography of the Addax (Addax nasomaculatus), a Saharan Antelope on the Verge of Extinction.

Published in:

Genes, 2021, v. 12, n. 8, p. 1236, doi. 10.3390/genes12081236

By:

Hempel, Elisabeth;
Westbury, Michael V.;
Grau, José H.;
Trinks, Alexandra;
Paijmans, Johanna L. A.;
Kliver, Sergei;
Barlow, Axel;
Mayer, Frieder;
Müller, Johannes;
Chen, Lei;
Koepfli, Klaus-Peter;
Hofreiter, Michael;
Bibi, Faysal

Publication type:

Article

First Bronze Age Human Mitogenomes from Calabria (Grotta Della Monaca, Southern Italy).

Published in:

Genes, 2021, v. 12, n. 5, p. 636, doi. 10.3390/genes12050636

By:

Fontani, Francesco;
Cilli, Elisabetta;
Arena, Fabiola;
Sarno, Stefania;
Modi, Alessandra;
De Fanti, Sara;
Andrews, Adam Jon;
Latorre, Adriana;
Abondio, Paolo;
Larocca, Felice;
Lari, Martina;
Caramelli, David;
Gualdi-Russo, Emanuela;
Luiselli, Donata;
Hofreiter, Michael

Publication type:

Article

Ancient DNA from the Asiatic Wild Dog (Cuon alpinus) from Europe.

Published in:

Genes, 2021, v. 12, n. 2, p. 144, doi. 10.3390/genes12020144

By:

Taron, Ulrike H.;
Paijmans, Johanna L. A.;
Barlow, Axel;
Preick, Michaela;
Iyengar, Arati;
Drăgușin, Virgil;
Vasile, Ștefan;
Marciszak, Adrian;
Roblíčková, Martina;
Hofreiter, Michael;
Leeb, Tosso

Publication type:

Article

Consensify: A Method for Generating Pseudohaploid Genome Sequences from Palaeogenomic Datasets with Reduced Error Rates.

Published in:

Genes, 2020, v. 11, n. 1, p. 50, doi. 10.3390/genes11010050

By:

Barlow, Axel;
Hartmann, Stefanie;
Gonzalez, Javier;
Hofreiter, Michael;
Paijmans, Johanna L. A.

Publication type:

Article

Ancient DNA from Giant Panda (Ailuropoda melanoleuca) of South-Western China Reveals Genetic Diversity Loss during the Holocene.

Published in:

Genes, 2018, v. 9, n. 4, p. 198, doi. 10.3390/genes9040198

By:

Sheng, Gui-Lian;
Barlow, Axel;
Cooper, Alan;
Hou, Xin-Dong;
Ji, Xue-Ping;
Jablonski, Nina G.;
Zhong, Bo-Jian;
Liu, Hong;
Flynn, Lawrence J.;
Yuan, Jun-Xia;
Wang, Li-Rui;
Basler, Nikolas;
Westbury, Michael V.;
Hofreiter, Michael;
Lai, Xu-Long

Publication type:

Article

An 'Aukward' Tale: A Genetic Approach to Discover the Whereabouts of the Last Great Auks.

Published in:

Genes, 2017, v. 8, n. 6, p. 164, doi. 10.3390/genes8060164

By:

Thomas, Jessica E.;
Carvalho, Gary R.;
Haile, James;
Martin, Michael D.;
Samaniego Castruita, Jose A.;
Niemann, Jonas;
Sinding, Mikkel-Holger S.;
Sandoval-Velasco, Marcela;
Rawlence, Nicolas J.;
Fuller, Errol;
Fjeldså, Jon;
Hofreiter, Michael;
Stewart, John R.;
Gilbert, M. Thomas P.;
Knapp, Michael

Publication type:

Article

Phylogenetic analyses suggest that diversification and body size evolution are independent in insects.

Published in:

BMC Evolutionary Biology, 2016, v. 16, p. 1, doi. 10.1186/s12862-015-0570-3

By:

Rainford, James L.;
Hofreiter, Michael;
Mayhew, Peter J.

Publication type:

Article

Reconstruction and in vivo analysis of the extinct tbx5 gene from ancient wingless moa (Aves: Dinornithiformes).

Published in:

BMC Evolutionary Biology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2148-14-75

By:

Huynen, Leon;
Suzuki, Takayuki;
Ogura, Toshihiko;
Watanabe, Yusuke;
Millar, Craig D;
Hofreiter, Michael;
Smith, Craig;
Mirmoeini, Sara;
Lambert, David M

Publication type:

Article

Four-toed sengi (Petrodromus tetradactylus, Afrotheria, Mammalia) museomics reveals a crucial role of East African forests in macroscelidean diversification.

Published in:

Zoological Journal of the Linnean Society, 2024, v. 201, n. 3, p. 1, doi. 10.1093/zoolinnean/zlae081

By:

Hagemann, Justus;
Nogales, Luis Victoria;
Hofreiter, Michael;
Arnold, Patrick

Publication type:

Article

Phylogenetic history of golden moles and tenrecs (Mammalia: Afrotheria).

Published in:

Zoological Journal of the Linnean Society, 2024, v. 201, n. 1, p. 184, doi. 10.1093/zoolinnean/zlad121

By:

Bronner, Gary N;
Mynhardt, Samantha;
Bennett, Nigel C;
Cohen, Lientjie;
Crumpton, Nick;
Hofreiter, Michael;
Arnold, Patrick;
Asher, Robert J

Publication type:

Article

Insights into the geographical origin and phylogeographical patterns of Paradisaea birds-of-paradise.

Published in:

Zoological Journal of the Linnean Society, 2022, v. 196, n. 4, p. 1394, doi. 10.1093/zoolinnean/zlac010

By:

Stelbrink, Björn;
Rintelen, Thomas Von;
Richter, Kirsten;
Finstermeier, Knut;
Frahnert, Sylke;
Cracraft, Joel;
Hofreiter, Michael

Publication type:

Article

High-throughput DNA sequencing of museum specimens sheds light on the long-missing species of the Bokermannohyla claresignata group (Anura: Hylidae: Cophomantini).

Published in:

Zoological Journal of the Linnean Society, 2020, v. 190, n. 4, p. 1235, doi. 10.1093/zoolinnean/zlaa033

By:

Lyra, Mariana L;
Lourenço, Ana Carolina C;
Pinheiro, Paulo D P;
Pezzuti, Tiago L;
Baêta, Délio;
Barlow, Axel;
Hofreiter, Michael;
Pombal, José P;
Haddad, Célio F B;
Faivovich, Julián

Publication type:

Article

Comparing mitogenomic timetrees for two African savannah primate genera (Chlorocebus and Papio).

Published in:

Zoological Journal of the Linnean Society, 2020, v. 190, n. 3, p. 1071, doi. 10.1093/zoolinnean/zlaa026

By:

Dolotovskaya, Sofya;
Bordallo, Juan Torroba;
Haus, Tanja;
Noll, Angela;
Hofreiter, Michael;
Zinner, Dietmar;
Roos, Christian

Publication type:

Article