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Age at diagnosis, obesity, smoking, and molecular subtypes in muscle-invasive bladder cancer.
Published in:
2017
By:
- Sun, Xuezheng;
- Hoadley, Katherine;
- Kim, William;
- Furberg, Helena;
- Olshan, Andrew;
- Troester, Melissa;
- Hoadley, Katherine A;
- Kim, William Y;
- Olshan, Andrew F;
- Troester, Melissa A
Publication type:
journal article
Collaborative study from the Bladder Cancer Advocacy Network for the genomic analysis of metastatic urothelial cancer.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33980-9
By:
- Damrauer, Jeffrey S.;
- Beckabir, Wolfgang;
- Klomp, Jeff;
- Zhou, Mi;
- Plimack, Elizabeth R.;
- Galsky, Matthew D.;
- Grivas, Petros;
- Hahn, Noah M.;
- O'Donnell, Peter H.;
- Iyer, Gopa;
- Quinn, David I.;
- Vincent, Benjamin G.;
- Quale, Diane Zipursky;
- Wobker, Sara E.;
- Hoadley, Katherine A.;
- Kim, William Y.;
- Milowsky, Matthew I.
Publication type:
Article
Virus expression detection reveals RNA-sequencing contamination in TCGA.
Published in:
BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6483-6
By:
- Selitsky, Sara R.;
- Marron, David;
- Hollern, Daniel;
- Mose, Lisle E.;
- Hoadley, Katherine A.;
- Jones, Corbin;
- Parker, Joel S.;
- Dittmer, Dirk P.;
- Perou, Charles M.
Publication type:
Article
Racial differences in breast cancer outcomes by hepatocyte growth factor pathway expression.
Published in:
Breast Cancer Research & Treatment, 2022, v. 192, n. 2, p. 447, doi. 10.1007/s10549-021-06497-w
By:
- Jones, Gieira S.;
- Hoadley, Katherine A.;
- Benefield, Halei;
- Olsson, Linnea T.;
- Hamilton, Alina M.;
- Bhattacharya, Arjun;
- Kirk, Erin L.;
- Tipaldos, Heather J.;
- Fleming, Jodie M.;
- Williams, Kevin P.;
- Love, Michael I.;
- Nichols, Hazel B.;
- Olshan, Andrew F.;
- Troester, Melissa A.
Publication type:
Article
Genomic characterization of rare molecular subclasses of hepatocellular carcinoma.
Published in:
Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02674-1
By:
- Damrauer, Jeffrey S.;
- Smith, Markia A.;
- Walter, Vonn;
- Thennavan, Aatish;
- Mose, Lisle E.;
- Selitsky, Sara R.;
- Hoadley, Katherine A.
Publication type:
Article
A multi-omics longitudinal study of the murine retinal response to chronic low-dose irradiation and simulated microgravity.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-19360-9
By:
- Kothiyal, Prachi;
- Eley, Greg;
- Ilangovan, Hari;
- Hoadley, Katherine A.;
- Elgart, S. Robin;
- Mao, Xiao W.;
- Eslami, Parastou
Publication type:
Article
Integrated RNA and DNA sequencing improves mutation detection in low purity tumors.
Published in:
Nucleic Acids Research, 2014, v. 42, n. 13, p. e107, doi. 10.1093/nar/gku489
By:
- Wilkerson, Matthew D.;
- Cabanski, Christopher R.;
- Sun, Wei;
- Hoadley, Katherine A.;
- Walter, Vonn;
- Mose, Lisle E.;
- Troester, Melissa A.;
- Hammerman, Peter S.;
- Parker, Joel S.;
- Perou, Charles M.;
- Hayes, D. Neil
Publication type:
Article
Virtual microdissection identifies distinct tumor- and stroma-specific subtypes of pancreatic ductal adenocarcinoma.
Published in:
Nature Genetics, 2015, v. 47, n. 10, p. 1168, doi. 10.1038/ng.3398
By:
- Hoadley, Katherine A;
- Williams, Lindsay A;
- Kim, Hong Jin;
- Bentrem, David J;
- Yeh, Jen Jen;
- Moffitt, Richard A;
- Marayati, Raoud;
- Chung, Alexander H;
- Anderson, Judy M;
- Hollingsworth, Michael A;
- Talamonti, Mark S;
- Iacobuzio-Donahue, Christine A;
- Flate, Elizabeth L;
- Loeza, S Gabriela Herrera;
- Rashid, Naim U;
- Smyla, Jadwiga K;
- Volmar, Keith E;
- Eaton, Samuel C
Publication type:
Article
Immunological and clinicopathological features predict HER2-positive breast cancer prognosis in the neoadjuvant NeoALTTO and CALGB 40601 randomized trials.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-42635-2
By:
- Rediti, Mattia;
- Fernandez-Martinez, Aranzazu;
- Venet, David;
- Rothé, Françoise;
- Hoadley, Katherine A.;
- Parker, Joel S.;
- Singh, Baljit;
- Campbell, Jordan D.;
- Ballman, Karla V.;
- Hillman, David W.;
- Winer, Eric P.;
- El-Abed, Sarra;
- Piccart, Martine;
- Di Cosimo, Serena;
- Symmans, William Fraser;
- Krop, Ian E.;
- Salgado, Roberto;
- Loi, Sherene;
- Pusztai, Lajos;
- Perou, Charles M.
Publication type:
Article
Hepatocyte growth factor pathway expression in breast cancer by race and subtype.
Published in:
2021
By:
- Jones, Gieira S.;
- Hoadley, Katherine A.;
- Olsson, Linnea T.;
- Hamilton, Alina M.;
- Bhattacharya, Arjun;
- Kirk, Erin L.;
- Tipaldos, Heather J.;
- Fleming, Jodie M.;
- Love, Michael I.;
- Nichols, Hazel B.;
- Olshan, Andrew F.;
- Troester, Melissa A.
Publication type:
journal article
Molecular Subtypes in Head and Neck Cancer Exhibit Distinct Patterns of Chromosomal Gain and Loss of Canonical Cancer Genes.
Published in:
PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0056823
By:
- Walter, Vonn;
- Yin, Xiaoying;
- Wilkerson, Matthew D.;
- Cabanski, Christopher R.;
- Zhao, Ni;
- Du, Ying;
- Ang, Mei Kim;
- Hayward, Michele C.;
- Salazar, Ashley H.;
- Hoadley, Katherine A.;
- Fritchie, Karen;
- Sailey, Charles G.;
- Weissler, Mark C.;
- Shockley, William W.;
- Zanation, Adam M.;
- Hackman, Trevor;
- Thorne, Leigh B.;
- Funkhouser, William D.;
- Muldrew, Kenneth L.;
- Olshan, Andrew F.
Publication type:
Article
Potential Tumor Suppressor Role for the c-Myb Oncogene in Luminal Breast Cancer.
Published in:
PLoS ONE, 2010, v. 5, n. 10, p. 1, doi. 10.1371/journal.pone.0013073
By:
- Thorner, Aaron R.;
- Parker, Joel S.;
- Hoadley, Katherine A.;
- Perou, Charles M.
Publication type:
Article
Targeting EGFR Induced Oxidative Stress by PARP1 Inhibition in Glioblastoma Therapy.
Published in:
PLoS ONE, 2010, v. 5, n. 5, p. 1, doi. 10.1371/journal.pone.0010767
By:
- Nitta, Masayuki;
- Kozono, David;
- Kennedy, Richard;
- Stommel, Jayne;
- Ng, Kimberly;
- Zinn, Pascal O.;
- Kushwaha, Deepa;
- Kesari, Santosh;
- Furnari, Frank;
- Hoadley, Katherine A.;
- Chin, Lynda;
- DePinho, Ronald A.;
- Cavenee, Webster K.;
- D'Andrea, Alan;
- Chen, Clark C.
Publication type:
Article
Identification of mRNA isoform switching in breast cancer.
Published in:
BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2521-9
By:
- Wei Zhao;
- Hoadley, Katherine A.;
- Parker, Joel S.;
- Perou, Charles M.
Publication type:
Article
Differences in race, molecular and tumor characteristics among women diagnosed with invasive ductal and lobular breast carcinomas.
Published in:
2019
By:
- Williams, Lindsay A.;
- Hoadley, Katherine A.;
- Nichols, Hazel B.;
- Geradts, Joseph;
- Perou, Charles M.;
- Love, Michael I.;
- Olshan, Andrew F.;
- Troester, Melissa A.
Publication type:
journal article
Reproductive risk factor associations with lobular and ductal carcinoma in the Carolina Breast Cancer Study.
Published in:
2018
By:
- Williams, Lindsay A.;
- Nichols, Hazel B.;
- Hoadley, Katherine A.;
- Tse, Chiu Kit;
- Geradts, Joseph;
- Bell, Mary Elizabeth;
- Perou, Charles M.;
- Love, Michael I.;
- Olshan, Andrew F.;
- Troester, Melissa A.
Publication type:
journal article
Outcomes of Hormone-Receptor Positive, HER2-Negative Breast Cancers by Race and Tumor Biological Features.
Published in:
JNCI Cancer Spectrum, 2021, v. 5, n. 1, p. 1, doi. 10.1093/jncics/pkaa072
By:
- Benefield, Halei C.;
- Reeder-Hayes, Katherine E.;
- Nichols, Hazel B.;
- Calhoun, Benjamin C.;
- Love, Michael I.;
- Kirk, Erin L.;
- Geradts, Joseph;
- Hoadley, Katherine A.;
- Cole, Stephen R.;
- Earp, H. Shelton;
- Olshan, Andrew F.;
- Carey, Lisa A.;
- Perou, Charles M.;
- Troester, Melissa A.
Publication type:
Article
Prognostic significance of RNA-based TP53 pathway function among estrogen receptor positive and negative breast cancer cases.
Published in:
NPJ Breast Cancer, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41523-022-00437-7
By:
- Hurson, Amber N.;
- Abubakar, Mustapha;
- Hamilton, Alina M.;
- Conway, Kathleen;
- Hoadley, Katherine A.;
- Love, Michael I.;
- Olshan, Andrew F.;
- Perou, Charles M.;
- Garcia-Closas, Montserrat;
- Troester, Melissa A.
Publication type:
Article
TP53 protein levels, RNA-based pathway assessment, and race among invasive breast cancer cases.
Published in:
NPJ Breast Cancer, 2018, v. 4, n. 1, p. N.PAG, doi. 10.1038/s41523-018-0067-5
By:
- Williams, Lindsay A.;
- Butler, Ebonee N.;
- Sun, Xuezheng;
- Allott, Emma H.;
- Cohen, Stephanie M.;
- Fuller, Ashley M.;
- Hoadley, Katherine A.;
- Perou, Charles M.;
- Geradts, Joseph;
- Olshan, Andrew F.;
- Troester, Melissa A.
Publication type:
Article
Patterns of cell cycle checkpoint deregulation associated with intrinsic molecular subtypes of human breast cancer cells.
Published in:
NPJ Breast Cancer, 2017, v. 3, n. 1, p. N.PAG, doi. 10.1038/s41523-017-0009-7
By:
- Bower, Jacquelyn J.;
- Vance, Leah D.;
- Psioda, Matthew;
- Smith-Roe, Stephanie L.;
- Simpson, Dennis A.;
- Ibrahim, Joseph G.;
- Hoadley, Katherine A.;
- Perou, Charles M.;
- Kaufmann, William K.
Publication type:
Article
Harmonizing heterogeneous transcriptomics datasets for machine learning-based analysis to identify spaceflown murine liver-specific changes.
Published in:
NPJ Microgravity, 2024, v. 10, n. 1, p. 1, doi. 10.1038/s41526-024-00379-3
By:
- Ilangovan, Hari;
- Kothiyal, Prachi;
- Hoadley, Katherine A.;
- Elgart, Robin;
- Eley, Greg;
- Eslami, Parastou
Publication type:
Article
Genetic determinants of the molecular portraits of epithelial cancers.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-13588-2
By:
- Xia, Youli;
- Fan, Cheng;
- Hoadley, Katherine A.;
- Parker, Joel S.;
- Perou, Charles M.
Publication type:
Article
Visual Intratumor Heterogeneity and Breast Tumor Progression.
Published in:
Cancers, 2024, v. 16, n. 13, p. 2294, doi. 10.3390/cancers16132294
By:
- Li, Yao;
- Van Alsten, Sarah C.;
- Lee, Dong Neuck;
- Kim, Taebin;
- Calhoun, Benjamin C.;
- Perou, Charles M.;
- Wobker, Sara E.;
- Marron, J. S.;
- Hoadley, Katherine A.;
- Troester, Melissa A.
Publication type:
Article
DNA Damage Repair Classifier Defines Distinct Groups in Hepatocellular Carcinoma.
Published in:
Cancers, 2022, v. 14, n. 17, p. 4282, doi. 10.3390/cancers14174282
By:
- Smith, Markia A.;
- Van Alsten, Sarah C.;
- Walens, Andrea;
- Damrauer, Jeffrey S.;
- Maduekwe, Ugwuji N.;
- Broaddus, Russell R.;
- Love, Michael I.;
- Troester, Melissa A.;
- Hoadley, Katherine A.
Publication type:
Article
Spatial Characterization of Tumor-Infiltrating Lymphocytes and Breast Cancer Progression.
Published in:
Cancers, 2022, v. 14, n. 9, p. N.PAG, doi. 10.3390/cancers14092148
By:
- Fassler, Danielle J.;
- Torre-Healy, Luke A.;
- Gupta, Rajarsi;
- Hamilton, Alina M.;
- Kobayashi, Soma;
- Van Alsten, Sarah C.;
- Zhang, Yuwei;
- Kurc, Tahsin;
- Moffitt, Richard A.;
- Troester, Melissa A.;
- Hoadley, Katherine A.;
- Saltz, Joel
Publication type:
Article
EGFR associated expression profiles vary with breast tumor subtype.
Published in:
BMC Genomics, 2007, v. 8, p. 258, doi. 10.1186/1471-2164-8-258
By:
- Hoadley, Katherine A;
- Weigman, Victor J;
- Cheng Fan;
- Sawyer, Lynda R;
- Xiaping He;
- Troester, Melissa A;
- Sartor, Carolyn I;
- Rieger-House, Thais;
- Bernard, Philip S;
- Carey, Lisa A;
- Perou, Charles M
Publication type:
Article
Amplification of SOX4 promotes PI3K/Akt signaling in human breast cancer.
Published in:
Breast Cancer Research & Treatment, 2017, v. 162, n. 3, p. 439, doi. 10.1007/s10549-017-4139-2
By:
- Mehta, Gaurav;
- Parker, Joel;
- Silva, Grace;
- Hoadley, Katherine;
- Perou, Charles;
- Gatza, Michael
Publication type:
Article
Molecular features of the basal-like breast cancer subtype based on BRCA1 mutation status.
Published in:
2014
By:
- Prat, Aleix;
- Cruz, Cristina;
- Hoadley, Katherine;
- Díez, Orland;
- Perou, Charles;
- Balmaña, Judith
Publication type:
Report
The molecular diversity of Luminal A breast tumors.
Published in:
Breast Cancer Research & Treatment, 2013, v. 141, n. 3, p. 409, doi. 10.1007/s10549-013-2699-3
By:
- Ciriello, Giovanni;
- Sinha, Rileen;
- Hoadley, Katherine;
- Jacobsen, Anders;
- Reva, Boris;
- Perou, Charles;
- Sander, Chris;
- Schultz, Nikolaus
Publication type:
Article
Association of PIK3CA Mutation With Pathologic Complete Response and Outcome by Hormone Receptor Status and Intrinsic Subtype in Early-Stage ERBB2/HER2-Positive Breast Cancer.
Published in:
JAMA Network Open, 2023, v. 6, n. 12, p. e2348814, doi. 10.1001/jamanetworkopen.2023.48814
By:
- Zagami, Paola;
- Fernandez-Martinez, Aranzazu;
- Rashid, Naim U.;
- Hoadley, Katherine A.;
- Spears, Patricia A.;
- Curigliano, Giuseppe;
- Perou, Charles M.;
- Carey, Lisa A.
Publication type:
Article
miR-181d: a predictive glioblastoma biomarker that downregulates MGMT expression.
Published in:
Neuro-Oncology, 2012, v. 14, n. 6, p. 712, doi. 10.1093/neuonc/nos089
By:
- Zhang, Wei;
- Zhang, Jing;
- Hoadley, Katherine;
- Kushwaha, Deepa;
- Ramakrishnan, Valya;
- Li, Shouwei;
- Kang, Chunsheng;
- You, Yongping;
- Jiang, Chuanlu;
- Song, Sonya Wei;
- Jiang, Tao;
- Chen, Clark C.
Publication type:
Article
Integrated RNA and DNA sequencing reveals early drivers of metastatic breast cancer.
Published in:
2018
By:
- Siegel, Marni B.;
- Xiaping He;
- Hoadley, Katherine A.;
- Hoyle, Alan;
- Pearce, Julia B.;
- Garrett, Amy L.;
- Kumar, Sunil;
- Moylan, Vincent J.;
- Brady, Claudia M.;
- Van Swearingen, Amanda E. D.;
- Marron, David;
- Gupta, Gaorav P.;
- Thorne, Leigh B.;
- Kieran, Niamh;
- Livasy, Chad;
- Mardis, Elaine R.;
- Parker, Joel S.;
- Mengjie Chen;
- Anders, Carey K.;
- Carey, Lisa A.
Publication type:
journal article
In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.
Published in:
PLoS Biology, 2020, v. 18, n. 12, p. 1, doi. 10.1371/journal.pbio.3000975
By:
- Franks, Jennifer L.;
- Martinez-Chacin, Raquel C.;
- Wang, Xianxi;
- Tiedemann, Rochelle L.;
- Bonacci, Thomas;
- Choudhury, Rajarshi;
- Bolhuis, Derek L.;
- Enrico, Taylor P.;
- Mouery, Ryan D.;
- Damrauer, Jeffrey S.;
- Yan, Feng;
- Harrison, Joseph S.;
- Major, M. Ben;
- Hoadley, Katherine A.;
- Suzuki, Aussie;
- Rothbart, Scott B.;
- Brown, Nicholas G.;
- Emanuele, Michael J.
Publication type:
Article
An approach for normalization and quality control for NanoString RNA expression data.
Published in:
Briefings in Bioinformatics, 2021, v. 22, n. 3, p. 1, doi. 10.1093/bib/bbaa163
By:
- Bhattacharya, Arjun;
- Hamilton, Alina M;
- Furberg, Helena;
- Pietzak, Eugene;
- Purdue, Mark P;
- Troester, Melissa A;
- Hoadley, Katherine A;
- Love, Michael I
Publication type:
Article
Overexpression of miR-146a in basal-like breast cancer cells confers enhanced tumorigenic potential in association with altered p53 status.
Published in:
Carcinogenesis, 2014, v. 35, n. 11, p. 2567, doi. 10.1093/carcin/bgu175
By:
- Sandhu, Rupninder;
- Rein, Jessica;
- D’Arcy, Monica;
- Herschkowitz, Jason I.;
- Hoadley, Katherine A.;
- Troester, Melissa A.
Publication type:
Article
BreakTrans: uncovering the genomic architecture of gene fusions.
Published in:
Genome Biology, 2013, v. 14, n. 8, p. R87, doi. 10.1186/gb-2013-14-8-r87
By:
- Ken Chen;
- Navin, Nicholas E;
- Yong Wang;
- Schmidt, Heather K;
- Wallis, John W;
- Niu, Beifang;
- Xian Fan;
- Hao Zhao;
- McLellan, Michael D;
- Hoadley, Katherine A;
- Mardis, Elaine R;
- Ley, Timothy J;
- Perou, Charles M;
- Wilson, Richard K;
- Li Ding
Publication type:
Article
Proteomic profiling of patient-derived glioblastoma xenografts identifies a subset with activated EGFR: implications for drug development.
Published in:
Journal of Neurochemistry, 2015, v. 133, n. 5, p. 730, doi. 10.1111/jnc.13032
By:
- Brown, Kristine E.;
- Chagoya, Gustavo;
- Kwatra, Shawn G.;
- Yen, Timothy;
- Keir, Stephen T.;
- Cooter, Mary;
- Hoadley, Katherine A.;
- Rasheed, Ahmed;
- Lipp, Eric S.;
- Mclendon, Roger;
- Ali‐Osman, Francis;
- Bigner, Darell D.;
- Sampson, John H.;
- Kwatra, Madan M.
Publication type:
Article
UNMASC: tumor-only variant calling with unmatched normal controls.
Published in:
NAR Cancer, 2021, v. 3, n. 4, p. 1, doi. 10.1093/narcan/zcab040
By:
- Little, Paul;
- Heejoon Jo;
- Hoyle, Alan;
- Mazul, Angela;
- Xiaobei Zhao;
- Salazar, Ashley H.;
- Farquhar, Douglas;
- Sheth, Siddharth;
- Masood, Maheer;
- Hayward, Michele C.;
- Parker, Joel S.;
- Hoadley, Katherine A.;
- Zevallos, Jose;
- Hayes, D. Neil
Publication type:
Article
Impact of stromal microenvironment on metabolic phenotypes in breast cancer: evidence for stroma-influenced Warburg effect.
Published in:
2012
By:
- Brauer, Heather Ann;
- Makowski, Liza;
- Hoadley, Katherine A.;
- Lang, Lindsay J.;
- Freemerman, Alex J.;
- Perou, Charles M.;
- Troester, Melissa A.
Publication type:
Abstract
A Pan-Cancer and Polygenic Bayesian Hierarchical Model for the Effect of Somatic Mutations on Survival.
Published in:
Cancer Informatics, 2020, v. 19, p. 1, doi. 10.1177/1176935120907399
By:
- Samorodnitsky, Sarah;
- Hoadley, Katherine A;
- Lock, Eric F
Publication type:
Article
A Pan-Cancer and Polygenic Bayesian Hierarchical Model for the Effect of Somatic Mutations on Survival.
Published in:
Cancer Informatics, 2020, v. 19, p. 1, doi. 10.1177/1176935120907399
By:
- Samorodnitsky, Sarah;
- Hoadley, Katherine A;
- Lock, Eric F
Publication type:
Article
Correction: Tumor Evolution in Two Patients with Basal-like Breast Cancer: A Retrospective Genomics Study of Multiple Metastases.
Published in:
2017
By:
- Hoadley, Katherine A.;
- Siegel, Marni B.;
- Kanchi, Krishna L.;
- Miller, Christopher A.;
- Ding, Li;
- Zhao, Wei;
- He, Xiaping;
- Parker, Joel S.;
- Wendl, Michael C.;
- Fulton, Robert S.;
- Demeter, Ryan T.;
- Wilson, Richard K.;
- Carey, Lisa A.;
- Perou, Charles M.;
- Mardis, Elaine R.
Publication type:
corrected article
Tumor Evolution in Two Patients with Basal-like Breast Cancer: A Retrospective Genomics Study of Multiple Metastases.
Published in:
2016
By:
- Hoadley, Katherine A.;
- Siegel, Marni B.;
- Kanchi, Krishna L.;
- Miller, Christopher A.;
- Ding, Li;
- Zhao, Wei;
- He, Xiaping;
- Parker, Joel S.;
- Wendl, Michael C.;
- Fulton, Robert S.;
- Demeter, Ryan T.;
- Wilson, Richard K.;
- Carey, Lisa A.;
- Perou, Charles M.;
- Mardis, Elaine R.
Publication type:
journal article
Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study.
Published in:
NPJ Breast Cancer, 2023, v. 9, n. 1, p. 1, doi. 10.1038/s41523-023-00597-0
By:
- Shi, Yifeng;
- Olsson, Linnea T.;
- Hoadley, Katherine A.;
- Calhoun, Benjamin C.;
- Marron, J. S.;
- Geradts, Joseph;
- Niethammer, Marc;
- Troester, Melissa A.
Publication type:
Article
Response and survival of breast cancer intrinsic subtypes following multi-agent neoadjuvant chemotherapy.
Published in:
2015
By:
- Prat, Aleix;
- Cheng Fan;
- Fernández, Aranzazu;
- Hoadley, Katherine A.;
- Martinello, Rossella;
- Vidal, Maria;
- Viladot, Margarita;
- Pineda, Estela;
- Arance, Ana;
- Muñoz, Montserrat;
- Paré, Laia;
- Cheang, Maggie C. U.;
- Adamo, Barbara;
- Perou, Charles M.;
- Fan, Cheng
Publication type:
journal article
Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-419
By:
- Wei Zhao;
- Xiaping He;
- Hoadley, Katherine A.;
- Parker, Joel S.;
- Hayes, David Neil;
- Perou, Charles M.
Publication type:
Article
A hierarchical spike-and-slab model for pan-cancer survival using pan-omic data.
Published in:
BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-022-04770-3
By:
- Samorodnitsky, Sarah;
- Hoadley, Katherine A.;
- Lock, Eric F.
Publication type:
Article
A hierarchical spike-and-slab model for pan-cancer survival using pan-omic data.
Published in:
BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-022-04770-3
By:
- Samorodnitsky, Sarah;
- Hoadley, Katherine A.;
- Lock, Eric F.
Publication type:
Article
Intratumor Heterogeneity of the Estrogen Receptor and the Long-term Risk of Fatal Breast Cancer.
Published in:
2018
By:
- Lindström, Linda S.;
- Yau, Christina;
- Czene, Kamila;
- Thompson, Carlie K.;
- Hoadley, Katherine A.;
- van't Veer, Laura J.;
- Balassanian, Ron;
- Bishop, John W.;
- Carpenter, Philip M.;
- Yunn-Yi Chen;
- Datnow, Brian;
- Hasteh, Farnaz;
- Krings, Gregor;
- Lin, Fritz;
- Yanhong Zhang;
- Nordenskjöld, Bo;
- Stål, Olle;
- Benz, Christopher C.;
- Fornander, Tommy;
- Borowsky, Alexander D.
Publication type:
journal article
Racial Differences in PAM50 Subtypes in the Carolina Breast Cancer Study.
Published in:
JNCI: Journal of the National Cancer Institute, 2018, v. 110, n. 2, p. 1, doi. 10.1093/jnci/djx135
By:
- Troester, Melissa A.;
- Xuezheng Sun;
- Allott, Emma H.;
- Geradts, Joseph;
- Cohen, Stephanie M.;
- Chiu-Kit Tse;
- Kirk, Erin L.;
- Thorne, Leigh B.;
- Mathews, Michelle;
- Yan Li;
- Zhiyuan Hu;
- Robinson, Whitney R.;
- Hoadley, Katherine A.;
- Olopade, Olufunmilayo I.;
- Reeder-Hayes, Katherine E.;
- Earp, H. Shelton;
- Olshan, Andrew F.;
- Carey, Lisa A.;
- Perou, Charles M.
Publication type:
Article

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