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Functional and Evolutionary Integration of a Fungal Gene With a Bacterial Operon.
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- Molecular Biology & Evolution, 2024, v. 41, n. 4, p. 1, doi. 10.1093/molbev/msae045
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- Article
Oxygenation influences xylose fermentation and gene expression in the yeast genera Spathaspora and Scheffersomyces.
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- Biotechnology for Biofuels & Bioproducts, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13068-024-02467-8
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- Article
Mitochondrial genome diversity across the subphylum Saccharomycotina.
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- Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1268944
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- Article
Taxogenomic analysis of a novel yeast species isolated from soil, Pichia galeolata sp. nov.
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- Yeast, 2023, v. 40, n. 12, p. 608, doi. 10.1002/yea.3905
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- Article
Ploidy evolution in a wild yeast is linked to an interaction between cell type and metabolism.
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- PLoS Biology, 2023, v. 21, n. 11, p. 1, doi. 10.1371/journal.pbio.3001909
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- Article
Codon Optimization Improves the Prediction of Xylose Metabolism from Gene Content in Budding Yeasts.
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- Molecular Biology & Evolution, 2023, v. 40, n. 6, p. 1, doi. 10.1093/molbev/msad111
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- Article
Assembly and comparative genome analysis of a Patagonian Aureobasidium pullulans isolate reveals unexpected intraspecific variation.
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- Yeast, 2023, v. 40, n. 5/6, p. 197, doi. 10.1002/yea.3853
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- Article
The Brazilian Amazonian rainforest harbors a high diversity of yeasts associated with rotting wood, including many candidates for new yeast species.
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- Yeast, 2023, v. 40, n. 2, p. 84, doi. 10.1002/yea.3837
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- Article
The future of fungi: threats and opportunities.
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- G3: Genes | Genomes | Genetics, 2022, v. 12, n. 11, p. 1, doi. 10.1093/g3journal/jkac224
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- Article
Functional Divergence in a Multi-gene Family Is a Key Evolutionary Innovation for Anaerobic Growth in Saccharomyces cerevisiae.
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- Molecular Biology & Evolution, 2022, v. 39, n. 10, p. 1, doi. 10.1093/molbev/msac202
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- Article
Yeasts from temperate forests.
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- Yeast, 2022, v. 39, n. 1, p. 4, doi. 10.1002/yea.3699
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- Article
Substrate, temperature, and geographical patterns among nearly 2000 natural yeast isolates.
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- Yeast, 2022, v. 39, n. 1, p. 55, doi. 10.1002/yea.3679
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- Article
Correction: Variation and selection on codon usage bias across an entire subphylum.
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- 2021
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- Correction Notice
Hanseniaspora smithiae sp. nov., a Novel Apiculate Yeast Species From Patagonian Forests That Lacks the Typical Genomic Domestication Signatures for Fermentative Environments.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.679894
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- Article
Nomenclatural issues concerning cultured yeasts and other fungi: why it is important to avoid unneeded name changes.
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- IMA Fungus, 2021, v. 12, n. 1, p. 1, doi. 10.1186/s43008-021-00067-x
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- Article
Signatures of optimal codon usage in metabolic genes inform budding yeast ecology.
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- PLoS Biology, 2021, v. 19, n. 4, p. 1, doi. 10.1371/journal.pbio.3001185
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- Article
Population genomics of the pathogenic yeast Candida tropicalis identifies hybrid isolates in environmental samples.
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- PLoS Pathogens, 2021, v. 17, n. 3, p. 1, doi. 10.1371/journal.ppat.1009138
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- Article
Repeated horizontal gene transfer of GALactose metabolism genes violates Dollo's law of irreversible loss.
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- Genetics, 2021, v. 217, n. 2, p. 1, doi. 10.1093/genetics/iyaa012
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- Article
An investigation of irreproducibility in maximum likelihood phylogenetic inference.
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- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-20005-6
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- Article
CRISpy-Pop: A Web Tool for Designing CRISPR/Cas9-Driven Genetic Modifications in Diverse Populations.
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- G3: Genes | Genomes | Genetics, 2020, v. 10, n. 11, p. 4287, doi. 10.1534/g3.120.401498
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- Article
Synthetic hybrids of six yeast species.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-15559-4
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- Article
Postglacial migration shaped the genomic diversity and global distribution of the wild ancestor of lager-brewing hybrids.
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- PLoS Genetics, 2020, v. 16, n. 4, p. 1, doi. 10.1371/journal.pgen.1008680
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- Article
Microbial Diversity Associated with the Pollen Stores of Captive-Bred Bumble Bee Colonies.
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- Insects (2075-4450), 2020, v. 11, n. 4, p. 250, doi. 10.3390/insects11040250
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- Article
Variation and selection on codon usage bias across an entire subphylum.
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- PLoS Genetics, 2019, v. 15, n. 7, p. 1, doi. 10.1371/journal.pgen.1008304
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- Article
Extensive loss of cell-cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts.
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- PLoS Biology, 2019, v. 17, n. 5, p. 1, doi. 10.1371/journal.pbio.3000255
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- Article
Evolution of a novel chimeric maltotriose transporter in Saccharomyces eubayanus from parent proteins unable to perform this function.
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- PLoS Genetics, 2019, v. 15, n. 4, p. 1, doi. 10.1371/journal.pgen.1007786
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- Article
Genomic content of a novel yeast species Hanseniaspora gamundiae sp. nov. from fungal stromata (Cyttaria) associated with a unique fermented beverage in Andean Patagonia, Argentina.
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- PLoS ONE, 2019, v. 14, n. 01, p. 1, doi. 10.1371/journal.pone.0210792
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- Article
sppIDer: A Species Identification Tool to Investigate Hybrid Genomes with High-Throughput Sequencing.
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- Molecular Biology & Evolution, 2018, v. 35, n. 11, p. 2835, doi. 10.1093/molbev/msy166
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- Article
Phylogeography of the wild Lager‐brewing ancestor (Saccharomyces eubayanus) in Patagonia.
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- Environmental Microbiology, 2018, v. 20, n. 10, p. 3732, doi. 10.1111/1462-2920.14375
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- Article
Natural Variation in the Multidrug Efflux Pump SGE1 Underlies Ionic Liquid Tolerance in Yeast.
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- Genetics, 2018, v. 210, n. 1, p. 219, doi. 10.1534/genetics.118.301161
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- Article
Repeated Cis-Regulatory Tuning of a Metabolic Bottleneck Gene during Evolution.
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- Molecular Biology & Evolution, 2018, v. 35, n. 8, p. 1968, doi. 10.1093/molbev/msy102
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- Article
Evolutionary instability of CUG-Leu in the genetic code of budding yeasts.
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- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04374-7
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- Article
Introducing ‘ecoYeast’: ecology and communities of yeasts.
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- Yeast, 2018, v. 35, n. 4, p. 313, doi. 10.1002/yea.3307
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- Article
Factors driving metabolic diversity in the budding yeast subphylum.
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- BMC Biology, 2018, v. 16, p. 1, doi. 10.1186/s12915-018-0498-3
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- Article
A Molecular Portrait of De Novo Genes in Yeasts.
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- Molecular Biology & Evolution, 2018, v. 35, n. 3, p. 631, doi. 10.1093/molbev/msx315
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- Article
Evaluating Fast Maximum Likelihood-Based Phylogenetic Programs Using Empirical Phylogenomic Data Sets.
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- Molecular Biology & Evolution, 2018, v. 35, n. 2, p. 486, doi. 10.1093/molbev/msx302
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- Article
On the origins and industrial applications of Saccharomyces cerevisiae × <italic>Saccharomyces kudriavzevii</italic> hybrids.
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- Yeast, 2018, v. 35, n. 1, p. 51, doi. 10.1002/yea.3283
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- Article
Hybridization and adaptive evolution of diverse Saccharomyces species for cellulosic biofuel production.
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- Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-017-0763-7
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- Article
Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale Data.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 12, p. 3927, doi. 10.1534/g3.116.034744
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- Article
Comparative genomics provides new insights into the diversity, physiology, and sexuality of the only industrially exploited tremellomycete: Phaffia rhodozyma.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3244-7
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- Article
In Silico Whole Genome Sequencer and Analyzer (iWGS): a Computational Pipeline to Guide the Design and Analysis of de novo Genome Sequencing Studies.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 11, p. 3655, doi. 10.1534/g3.116.034249
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- Article
Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae.
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- PLoS Genetics, 2016, v. 12, n. 10, p. 1, doi. 10.1371/journal.pgen.1006372
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- Article
Ongoing resolution of duplicate gene functions shapes the diversification of a metabolic network.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.19027
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- Article
Dynamic Evolution of Nitric Oxide Detoxifying Flavohemoglobins, a Family of Single-Protein Metabolic Modules in Bacteria and Eukaryotes.
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- Molecular Biology & Evolution, 2016, v. 33, n. 8, p. 1979, doi. 10.1093/molbev/msw073
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- Article
Complex Ancestries of Lager-Brewing Hybrids Were Shaped by Standing Variation in the Wild Yeast Saccharomyces eubayanus.
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- PLoS Genetics, 2016, v. 12, n. 7, p. 1, doi. 10.1371/journal.pgen.1006155
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- Article
Genome Sequence and Analysis of a Stress-Tolerant, Wild-Derived Strain of Saccharomyces cerevisiae Used in Biofuels Research.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 6, p. 1757, doi. 10.1534/g3.116.029389
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- Article
The Genome Sequence of Saccharomyces eubayanus and the Domestication of Lager-Brewing Yeasts.
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- Molecular Biology & Evolution, 2015, v. 32, n. 11, p. 2818, doi. 10.1093/molbev/msv168
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- Article
High-Efficiency Genome Editing and Allele Replacement in Prototrophic and Wild Strains of Saccharomyces.
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- Genetics, 2014, v. 198, n. 3, p. 859, doi. 10.1534/genetics.114.170118
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- Article
A Gondwanan imprint on global diversity and domestication of wine and cider yeast Saccharomyces uvarum.
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- Nature Communications, 2014, v. 5, n. 6, p. 4044, doi. 10.1038/ncomms5044
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- Article
Population structure and reticulate evolution of Saccharomyces eubayanus and its lager-brewing hybrids.
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- Molecular Ecology, 2014, v. 23, n. 8, p. 2031, doi. 10.1111/mec.12702
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- Article