Works by Hirsch, Candice N.

Results: 66
    1

    Utility of Climatic Information via Combining Ability Models to Improve Genomic Prediction for Yield Within the Genomes to Fields Maize Project.

    Published in:
    Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.592769
    By:
    • Jarquin, Diego;
    • de Leon, Natalia;
    • Romay, Cinta;
    • Bohn, Martin;
    • Buckler, Edward S.;
    • Ciampitti, Ignacio;
    • Edwards, Jode;
    • Ertl, David;
    • Flint-Garcia, Sherry;
    • Gore, Michael A.;
    • Graham, Christopher;
    • Hirsch, Candice N.;
    • Holland, James B.;
    • Hooker, David;
    • Kaeppler, Shawn M.;
    • Knoll, Joseph;
    • Lee, Elizabeth C.;
    • Lawrence-Dill, Carolyn J.;
    • Lynch, Jonathan P.;
    • Moose, Stephen P.
    Publication type:
    Article
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    Single‐parent expression drives dynamic gene expression complementation in maize hybrids.

    Published in:
    Plant Journal, 2021, v. 105, n. 1, p. 93, doi. 10.1111/tpj.15042
    By:
    • Li, Zhi;
    • Zhou, Peng;
    • Della Coletta, Rafael;
    • Zhang, Tifu;
    • Brohammer, Alex B.;
    • O'Connor, Christine;
    • Vaillancourt, Brieanne;
    • Lipzen, Anna;
    • Daum, Chris;
    • Barry, Kerrie;
    • de Leon, Natalia;
    • Hirsch, Cory D.;
    • Buell, C. Robin;
    • Kaeppler, Shawn M.;
    • Springer, Nathan M.;
    • Hirsch, Candice N.
    Publication type:
    Article
    6

    Transposable elements contribute to dynamic genome content in maize.

    Published in:
    Plant Journal, 2019, v. 100, n. 5, p. 1052, doi. 10.1111/tpj.14489
    By:
    • Anderson, Sarah N.;
    • Stitzer, Michelle C.;
    • Brohammer, Alex B.;
    • Zhou, Peng;
    • Noshay, Jaclyn M.;
    • O'Connor, Christine H.;
    • Hirsch, Cory D.;
    • Ross‐Ibarra, Jeffrey;
    • Hirsch, Candice N.;
    • Springer, Nathan M.
    Publication type:
    Article
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    Gapless assembly of maize chromosomes using long-read technologies.

    Published in:
    Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02029-9
    By:
    • Liu, Jianing;
    • Seetharam, Arun S.;
    • Chougule, Kapeel;
    • Ou, Shujun;
    • Swentowsky, Kyle W.;
    • Gent, Jonathan I.;
    • Llaca, Victor;
    • Woodhouse, Margaret R.;
    • Manchanda, Nancy;
    • Presting, Gernot G.;
    • Kudrna, David A.;
    • Alabady, Magdy;
    • Hirsch, Candice N.;
    • Fengler, Kevin A.;
    • Ware, Doreen;
    • Michael, Todd P.;
    • Hufford, Matthew B.;
    • Dawe, R. Kelly
    Publication type:
    Article
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    Maize genomes to fields (G2F): 2014–2017 field seasons: genotype, phenotype, climatic, soil, and inbred ear image datasets.

    Published in:
    BMC Research Notes, 2020, v. 13, n. 1, p. 1, doi. 10.1186/s13104-020-4922-8
    By:
    • McFarland, Bridget A.;
    • AlKhalifah, Naser;
    • Bohn, Martin;
    • Bubert, Jessica;
    • Buckler, Edward S.;
    • Ciampitti, Ignacio;
    • Edwards, Jode;
    • Ertl, David;
    • Gage, Joseph L.;
    • Falcon, Celeste M.;
    • Flint-Garcia, Sherry;
    • Gore, Michael A.;
    • Graham, Christopher;
    • Hirsch, Candice N.;
    • Holland, James B.;
    • Hood, Elizabeth;
    • Hooker, David;
    • Jarquin, Diego;
    • Kaeppler, Shawn M.;
    • Knoll, Joseph
    Publication type:
    Article
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    Data‐driven identification of environmental variables influencing phenotypic plasticity to facilitate breeding for future climates.

    Published in:
    New Phytologist, 2024, v. 244, n. 2, p. 618, doi. 10.1111/nph.19937
    By:
    • Kusmec, Aaron;
    • Yeh, Cheng‐Ting 'Eddy';
    • Bohn, Martin O.;
    • Campbell, Darwin A.;
    • Ciampitti, Ignacio A.;
    • Ertl, David S.;
    • Flint‐Garcia, Sherry A.;
    • Gore, Michael A.;
    • Hirsch, Candice N.;
    • Kaeppler, Shawn M.;
    • Knoll, Joseph E.;
    • Kolkman, Judith M.;
    • Lauter, Nick;
    • Lawrence‐Dill, Carolyn J.;
    • Lee, Elizabeth C.;
    • de Leon, Natalia;
    • Liu, Sanzhen;
    • Lorence, Argelia;
    • Schnable, James C.;
    • Sekhon, Rajandeep S.
    Publication type:
    Article
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    Yield prediction through integration of genetic, environment, and management data through deep learning.

    Published in:
    G3: Genes | Genomes | Genetics, 2023, v. 13, n. 4, p. 1, doi. 10.1093/g3journal/jkad006
    By:
    • Kick, Daniel R.;
    • Wallace, Jason G.;
    • Schnable, James C.;
    • Kolkman, Judith M.;
    • Alaca, Barıs;
    • Beissinger, Timothy M.;
    • Edwards, Jode;
    • Ertl, David;
    • Flint-Garcia, Sherry;
    • Gage, Joseph L.;
    • Hirsch, Candice N.;
    • Knoll, Joseph E.;
    • de Leon, Natalia;
    • Lima, Dayane C.;
    • Moreta, Danilo E.;
    • Singh, Maninder P.;
    • Thompson, Addie;
    • Weldekidan, Teclemariam;
    • Washburn, Jacob D.
    Publication type:
    Article
    22

    Whole-genome variation of transposable element insertions in a maize diversity panel.

    Published in:
    G3: Genes | Genomes | Genetics, 2021, v. 11, n. 10, p. 1, doi. 10.1093/g3journal/jkab238
    By:
    • Yinjie Qiu;
    • O'Connor, Christine H.;
    • Coletta, Rafael Della;
    • Renk, Jonathan S.;
    • Monnahan, Patrick J.;
    • Noshay, Jaclyn M.;
    • Zhikai Liang;
    • Gilbert, Amanda;
    • Anderson, Sarah N.;
    • McGaugh, Suzanne E.;
    • Springer, Nathan M.;
    • Hirsch, Candice N.
    Publication type:
    Article
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    The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment.

    Published in:
    G3: Genes | Genomes | Genetics, 2021, v. 11, n. 2, p. 1, doi. 10.1093/g3journal/jkaa050
    By:
    • Rogers, Anna R.;
    • Dunne, Jeffrey C.;
    • Romay, Cinta;
    • Bohn, Martin;
    • Buckler, Edward S.;
    • Ciampitti, Ignacio A.;
    • Edwards, Jode;
    • Ertl, David;
    • Flint-Garcia, Sherry;
    • Gore, Michael A.;
    • Graham, Christopher;
    • Hirsch, Candice N.;
    • Hood, Elizabeth;
    • Hooker, David C.;
    • Knoll, Joseph;
    • Lee, Elizabeth C.;
    • Lorenz, Aaron;
    • Lynch, Jonathan P.;
    • McKay, John;
    • Moose, Stephen P.
    Publication type:
    Article
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    Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize.

    Published in:
    Plant Cell, 2016, v. 28, n. 11, p. 2700, doi. 10.1105/tpc.16.00353
    By:
    • Hirsch, Candice N.;
    • Hirsch, Cory D.;
    • Brohammer, Alex B.;
    • Bowman, Megan J.;
    • Soifer, Ilya;
    • Barad, Omer;
    • Shem-Tov, Doron;
    • Baruch, Kobi;
    • Lu, Fei;
    • Hernandez, Alvaro G.;
    • Fields, Christopher J.;
    • Wright, Chris L.;
    • Koehler, Klaus;
    • Springer, Nathan M.;
    • Buckler, Edward;
    • Buell, C. Robin;
    • Leon, Natalia de;
    • Kaeppler, Shawn M.;
    • Childs, Kevin L.;
    • Mikel, Mark A.
    Publication type:
    Article
    31

    Insights into the Maize Pan-Genome and Pan-Transcriptome.

    Published in:
    Plant Cell, 2014, v. 26, n. 1, p. 121, doi. 10.1105/tpc.113.119982
    By:
    • Hirsch, Candice N.;
    • Foerster, Jillian M.;
    • Johnson, James M.;
    • Sekhon, Rajandeep S.;
    • Muttoni, German;
    • Vaillancourt, Brieanne;
    • Peñagaricano, Francisco;
    • Lindquist, Erika;
    • Pedraza, Mary Ann;
    • Barry, Kerrie;
    • Leon, Natalia de;
    • Kaeppler, Shawn M.;
    • Buell, C. Robin
    Publication type:
    Article
    32

    Genotype-by-environment interactions affecting heterosis in maize.

    Published in:
    PLoS ONE, 2018, v. 13, n. 1, p. 1, doi. 10.1371/journal.pone.0191321
    By:
    • Li, Zhi;
    • Coffey, Lisa;
    • Garfin, Jacob;
    • Miller, Nathan D.;
    • White, Michael R.;
    • Spalding, Edgar P.;
    • de Leon, Natalia;
    • Kaeppler, Shawn M.;
    • Schnable, Patrick S.;
    • Springer, Nathan M.;
    • Hirsch, Candice N.
    Publication type:
    Article
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    Genetic control of kernel compositional variation in a maize diversity panel.

    Published in:
    Plant Genome, 2021, v. 14, n. 3, p. 1, doi. 10.1002/tpg2.20115
    By:
    • Renk, Jonathan S.;
    • Gilbert, Amanda M.;
    • Hattery, Travis J.;
    • O'Connor, Christine H.;
    • Monnahan, Patrick J.;
    • Anderson, Nickolas;
    • Waters, Amanda J.;
    • Eickholt, David P.;
    • Flint‐Garcia, Sherry A.;
    • Yandeau‐Nelson, Marna D.;
    • Hirsch, Candice N.
    Publication type:
    Article
    38

    Genomic variation within the maize stiff‐stalk heterotic germplasm pool.

    Published in:
    Plant Genome, 2021, v. 14, n. 3, p. 1, doi. 10.1002/tpg2.20114
    By:
    • Bornowski, Nolan;
    • Michel, Kathryn J.;
    • Hamilton, John P.;
    • Ou, Shujun;
    • Seetharam, Arun S.;
    • Jenkins, Jerry;
    • Grimwood, Jane;
    • Plott, Chris;
    • Shu, Shengqiang;
    • Talag, Jayson;
    • Kennedy, Megan;
    • Hundley, Hope;
    • Singan, Vasanth R.;
    • Barry, Kerrie;
    • Daum, Chris;
    • Yoshinaga, Yuko;
    • Schmutz, Jeremy;
    • Hirsch, Candice N.;
    • Hufford, Matthew B.;
    • de Leon, Natalia
    Publication type:
    Article
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    2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative.

    Published in:
    BMC Research Notes, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13104-023-06430-y
    By:
    • Lima, Dayane Cristina;
    • Aviles, Alejandro Castro;
    • Alpers, Ryan Timothy;
    • Perkins, Alden;
    • Schoemaker, Dylan L;
    • Costa, Martin;
    • Michel, Kathryn J.;
    • Kaeppler, Shawn;
    • Ertl, David;
    • Romay, Maria Cinta;
    • Gage, Joseph L.;
    • Holland, James;
    • Beissinger, Timothy;
    • Bohn, Martin;
    • Buckler, Edward;
    • Edwards, Jode;
    • Flint-Garcia, Sherry;
    • Gore, Michael A.;
    • Hirsch, Candice N.;
    • Knoll, Joseph E.
    Publication type:
    Article
    42

    Genomes to Fields 2022 Maize genotype by Environment Prediction Competition.

    Published in:
    BMC Research Notes, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13104-023-06421-z
    By:
    • Lima, Dayane Cristina;
    • Washburn, Jacob D.;
    • Varela, José Ignacio;
    • Chen, Qiuyue;
    • Gage, Joseph L.;
    • Romay, Maria Cinta;
    • Holland, James;
    • Ertl, David;
    • Lopez-Cruz, Marco;
    • Aguate, Fernando M.;
    • de los Campos, Gustavo;
    • Kaeppler, Shawn;
    • Beissinger, Timothy;
    • Bohn, Martin;
    • Buckler, Edward;
    • Edwards, Jode;
    • Flint-Garcia, Sherry;
    • Gore, Michael A.;
    • Hirsch, Candice N.;
    • Knoll, Joseph E.
    Publication type:
    Article
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    Variation and Inheritance of Small RNAs in Maize Inbreds and F1 Hybrids.

    Published in:
    Plant Physiology, 2020, v. 182, n. 1, p. 318, doi. 10.1104/pp.19.00817
    By:
    • Crisp, Peter A.;
    • Hammond, Reza;
    • Peng Zhou;
    • Vaillancourt, Brieanne;
    • Lipzen, Anna;
    • Daum, Chris;
    • Barry, Kerrie;
    • de Leon, Natalia;
    • Buell, C. Robin;
    • Kaeppler, Shawn M.;
    • Meyers, Blake C.;
    • Hirsch, Candice N.;
    • Springer, Nathan M.
    Publication type:
    Article
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    The effect of artificial selection on phenotypic plasticity in maize.

    Published in:
    Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01450-2
    By:
    • Gage, Joseph L.;
    • Jarquin, Diego;
    • Romay, Cinta;
    • Lorenz, Aaron;
    • Buckler, Edward S.;
    • Kaeppler, Shawn;
    • Alkhalifah, Naser;
    • Bohn, Martin;
    • Campbell, Darwin A.;
    • Edwards, Jode;
    • Ertl, David;
    • Flint-Garcia, Sherry;
    • Gardiner, Jack;
    • Good, Byron;
    • Hirsch, Candice N.;
    • Holland, Jim;
    • Hooker, David C.;
    • Knoll, Joseph;
    • Kolkman, Judith;
    • Kruger, Greg
    Publication type:
    Article