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uS5/Rps2 residues at the 40S ribosome entry channel enhance initiation at suboptimal start codons in vivo.
- Published in:
- Genetics, 2022, v. 220, n. 1, p. 1, doi. 10.1093/genetics/iyab176
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- Article
Vps Factors Are Required for Efficient Transcription Elongation in Budding Yeast.
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- Genetics, 2013, v. 193, n. 3, p. 829, doi. 10.1534/genetics.112.146308
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- Article
YeastBook: An Encyclopedia of the Reference Eukaryotic Cell.
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- Genetics, 2011, v. 189, n. 3, p. 683, doi. 10.1534/genetics.111.135129
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- Article
Depletion of eIF4G from yeast cells narrows the range of translational efficiencies genome-wide.
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- BMC Genomics, 2011, v. 12, n. 1, p. 68, doi. 10.1186/1471-2164-12-68
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- Article
Guanine Nucleotide Pool Imbalance Impairs Multiple Steps of Protein Synthesis and Disrupts GCN4 Translational Control in Saccharomyces cerevisiae.
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- Genetics, 2011, v. 187, n. 1, p. 105, doi. 10.1534/genetics.110.122135
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- Article
Identification of GCD14 and GCD15, novel genes required for translational repression of GCN4...
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- Genetics, 1998, v. 148, n. 3, p. 1007, doi. 10.1093/genetics/148.3.1007
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- Article
The Translational Activator GCN3 Functions Downstream from GCN1 and GCN2 in the Regulatory Pathway That Couples GCN4 Expression to Amino Acid Availability in Saccharomyces cerevisiae.
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- Genetics, 1990, v. 126, n. 3, p. 549, doi. 10.1093/genetics/126.3.549
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- Article
Amino Acid Sequence Similarity Between GCNS and GCD2, Positive and Negative Translational Regulators of GCN4: Evidence for Antagonism by Competition.
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- Genetics, 1989, v. 122, n. 3, p. 551
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- Article
gcdl2 Mutations Are gcn3-Dependent Alleles of GCD2, a Negative Regulator of GCN4 in the General Amino Acid Control of Saccharomyces cerevisiae.
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- Genetics, 1989, v. 122, n. 3, p. 543
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- Article
Interactions Between Positive and Negative Regulators of GCN4 Controlling Gene Expression and Entry Into the Yeast Cell Cycle.
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- Genetics, 1987, v. 117, n. 3, p. 409
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- Article
eIF1A residues implicated in cancer stabilize translation preinitiation complexes and favor suboptimal initiation sites in yeast.
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- eLife, 2017, p. 1, doi. 10.7554/eLife.31250.001
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- Article
Yeast eIF4A enhances recruitment of mRNAs regardless of their structural complexity.
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- eLife, 2017, p. 1, doi. 10.7554/eLife.31476.001
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- Article
Interface between 40S exit channel protein uS7/Rps5 and eIF2α modulates start codon recognition in vivo.
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- eLife, 2017, p. 1, doi. 10.7554/eLife.22572
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- Article
Eukaryotic translation initiation factor 3 plays distinct roles at the mRNA entry and exit channels of the ribosomal preinitiation complex.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.20934
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- Publication type:
- Article
The β-hairpin of 40S exit channel protein Rps5/uS7 promotes efficient and accurate translation initiation in vivo.
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- eLife, 2015, p. 1, doi. 10.7554/eLife.07939
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- Article
mRNA decapping activators Pat1 and Dhh1 regulate transcript abundance and translation to tune cellular responses to nutrient availability.
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- Nucleic Acids Research, 2023, v. 51, n. 17, p. 9314, doi. 10.1093/nar/gkad584
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- Article
Differential requirements for Gcn5 and NuA4 HAT activities in the starvation-induced versus basal transcriptomes.
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- Nucleic Acids Research, 2023, v. 51, n. 8, p. 3696, doi. 10.1093/nar/gkad099
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- Article
Large-scale movement of eIF3 domains during translation initiation modulate start codon selection.
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- Nucleic Acids Research, 2021, v. 49, n. 20, p. 11491, doi. 10.1093/nar/gkab908
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- Article
Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast.
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- Nucleic Acids Research, 2021, v. 49, n. 1, p. 599, doi. 10.1093/nar/gkaa1212
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- Article
eIF2α interactions with mRNA control accurate start codon selection by the translation preinitiation complex.
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- Nucleic Acids Research, 2020, v. 48, n. 18, p. 10280, doi. 10.1093/nar/gkaa761
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- Article
Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast.
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- Nucleic Acids Research, 2020, v. 48, n. 15, p. 8408, doi. 10.1093/nar/gkaa571
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- Article
Functional interplay between DEAD-box RNA helicases Ded1 and Dbp1 in preinitiation complex attachment and scanning on structured mRNAs in vivo.
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- Nucleic Acids Research, 2019, v. 47, n. 16, p. 8785, doi. 10.1093/nar/gkz595
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- Article
network of eIF2β interactions with eIF1 and Met-tRNA i promotes accurate start codon selection by the translation preinitiation complex.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2574, doi. 10.1093/nar/gky1274
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- Article
Conformational changes in the P site and mRNA entry channel evoked by AUG recognition in yeast translation preinitiation complexes.
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- Nucleic Acids Research, 2015, v. 43, n. 4, p. 2293, doi. 10.1093/nar/gkv028
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- Article
Eukaryotic translation initiation factor eIF5 promotes the accuracy of start codon recognition by regulating P<sub>i</sub> release and conformational transitions of the preinitiation complex.
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- Nucleic Acids Research, 2014, v. 42, n. 15, p. 9623, doi. 10.1093/nar/gku653
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- Article
Rps5-Rps16 communication is essential for efficient translation initiation in yeast S. cerevisiae.
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- Nucleic Acids Research, 2014, v. 42, n. 13, p. 8537, doi. 10.1093/nar/gku550
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- Publication type:
- Article
Cotranscriptional recruitment of yeast TRAMP complex to intronic sequences promotes optimal pre-mRNA splicing.
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- Nucleic Acids Research, 2014, v. 42, n. 1, p. 643, doi. 10.1093/nar/gkt888
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- Article
Pol II CTD kinases Bur1 and Kin28 promote Spt5 CTR-independent recruitment of Paf1 complex.
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- EMBO Journal, 2012, v. 31, n. 16, p. 3494, doi. 10.1038/emboj.2012.188
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- Article
Multiple elements in the eIF4G1 N-terminus promote assembly of eIF4G1•PABP mRNPs in vivo.
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- EMBO Journal, 2011, v. 30, n. 2, p. 302, doi. 10.1038/emboj.2010.312
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- Article
N- and C-terminal residues of eIF1A have opposing effects on the fidelity of start codon selection.
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- EMBO Journal, 2007, v. 26, n. 6, p. 1602, doi. 10.1038/sj.emboj.7601613
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- Article
The eIF1A C-terminal domain promotes initiation complex assembly, scanning and AUG selection in vivo.
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- EMBO Journal, 2005, v. 24, n. 20, p. 3588, doi. 10.1038/sj.emboj.7600821
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- Article
Functions of eIF3 downstream of 48S assembly impact AUG recognition and GCN4 translational control.
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- EMBO Journal, 2004, v. 23, n. 5, p. 1166, doi. 10.1038/sj.emboj.7600116
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- Article
Domains of eIF1A that mediate binding to eIF2, eIF3 and eIF5B and promote ternary complex recruitment in vivo.
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- EMBO Journal, 2003, v. 22, n. 2, p. 193, doi. 10.1093/emboj/cdg030
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- Article
Direct eIF2-eIF3 contact in the multifactor complex is important for translation initiation in vivo.
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- EMBO Journal, 2002, v. 21, n. 21, p. 5886, doi. 10.1093/emboj/cdf563
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- Article
Physical evidence for distinct mechanisms of translational control by upstream open reading frames.
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- EMBO Journal, 2001, v. 20, n. 22, p. 6453, doi. 10.1093/emboj/20.22.6453
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- Article
A subcomplex of three eIF3 subunits binds eIF1 and eIF5 and stimulates ribosome binding of mRNA and tRNA<sub>i</sub><sup>Met</sup>.
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- EMBO Journal, 2001, v. 20, n. 11, p. 2954, doi. 10.1093/emboj/20.11.2954
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- Article
Multiple roles for the C-terminal domain of eIF5 in translation initiation complex assembly and GTPase activation.
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- EMBO Journal, 2001, v. 20, n. 9, p. 2326, doi. 10.1093/emboj/20.9.2326
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- Article
The tRNA-binding moiety in GCN2 contains a dimerization domain that interacts with the kinase domain and is required for tRNA binding and kinase activation.
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- EMBO Journal, 2001, v. 20, n. 6, p. 1425, doi. 10.1093/emboj/20.6.1425
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- Article
Separate domains in GCN1 for binding protein kinase GCN2 and ribosomes are required for GCN2 activation in amino acid-starved cells.
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- EMBO Journal, 2000, v. 19, n. 23, p. 6622, doi. 10.1093/emboj/19.23.6622
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- Article
Association of GCN1-GCN20 regulatory complex with the N-terminus of eIF2a kinase GCN2 is required for GCN2 activation.
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- EMBO Journal, 2000, v. 19, n. 8, p. 1887, doi. 10.1093/emboj/19.8.1887
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- Article
Conserved bipartite motifs in yeast eIF5 and eIF2Be, GTPase-activating and GDP-GTP exchange factors in translation initiation, mediate binding to their common substrate eIF2.
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- EMBO Journal, 1999, v. 18, n. 6, p. 1673, doi. 10.1093/emboj/18.6.1673
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- Article
Temperature-dependent regulation of upstream open reading frame translation in S. cerevisiae.
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- BMC Biology, 2019, v. 17, n. 1, p. N.PAG, doi. 10.1186/s12915-019-0718-5
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- Publication type:
- Article
Interaction between the tRNA-Binding and C-Terminal Domains of Yeast Gcn2 Regulates Kinase Activity In Vivo.
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- PLoS Genetics, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pgen.1004991
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- Article
Accumulation of a Threonine Biosynthetic Intermediate Attenuates General Amino Acid Control by Accelerating Degradation of Gcn4 via Pho85 and Cdk8.
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- PLoS Genetics, 2014, v. 10, n. 7, p. 1, doi. 10.1371/journal.pgen.1004534
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- Publication type:
- Article
Enhanced Interaction between Pseudokinase and Kinase Domains in Gcn2 stimulates eIF2α Phosphorylation in Starved Cells.
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- PLoS Genetics, 2014, v. 10, n. 5, p. 1, doi. 10.1371/journal.pgen.1004326
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- Publication type:
- Article
Study of Translational Control of Eukaryotic Gene Expression Using Yeast.
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- Annals of the New York Academy of Sciences, 2004, v. 1038, n. 1, p. 60, doi. 10.1196/annals.1315.012
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- Publication type:
- Article
Gene-specific translational control of the yeast GCN4 gene by phosphorylation of eukaryotic initiation factor 2.
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- Molecular Microbiology, 1993, v. 10, n. 2, p. 215, doi. 10.1111/j.1365-2958.1993.tb01947.x
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- Article
Differential effects of 40S ribosome recycling factors on reinitiation at regulatory uORFs in GCN4 mRNA are not dictated by their roles in bulk 40S recycling.
- Published in:
- Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06761-x
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- Article
Reprogramming of translation in yeast cells impaired for ribosome recycling favors short, efficiently translated mRNAs.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.64283
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- Publication type:
- Article
Transcriptome- wide analysis of the function of Ded1 in translation preinitiation complex assembly in a reconstituted in vitro system.
- Published in:
- eLife, 2024, p. 1, doi. 10.7554/eLife.93255
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- Publication type:
- Article