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SBOL Visual: A Graphical Language for Genetic Designs.
Published in:
PLoS Biology, 2015, v. 13, n. 12, p. 1, doi. 10.1371/journal.pbio.1002310
By:
- Quinn, Jacqueline Y.;
- IIICox, Robert Sidney;
- Adler, Aaron;
- Beal, Jacob;
- Bhatia, Swapnil;
- Cai, Yizhi;
- Chen, Joanna;
- Clancy, Kevin;
- Galdzicki, Michal;
- Hillson, Nathan J.;
- Le Novère, Nicolas;
- Maheshwari, Akshay J.;
- McLaughlin, James Alastair;
- Myers, Chris J.;
- P, Umesh;
- Pocock, Matthew;
- Rodriguez, Cesar;
- Soldatova, Larisa;
- Stan, Guy-Bart V.;
- Swainston, Neil
Publication type:
Article
Fluorescent amplification for next generation sequencing (FA-NGS) library preparation.
Published in:
BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6481-8
By:
- Chiniquy, Jennifer;
- Garber, Megan E.;
- Mukhopadhyay, Aindrila;
- Hillson, Nathan J.
Publication type:
Article
A Cas9-based toolkit to program gene expression in Saccharomyces cerevisiae.
Published in:
Nucleic Acids Research, 2017, v. 45, n. 1, p. 496, doi. 10.1093/nar/gkw1023
By:
- Apel, Amanda Reider;
- d'Espaux, Leo;
- Wehrs, Maren;
- Sachs, Daniel;
- A. Li, Rachel;
- Tong, Gary J.;
- Garber, Megan;
- Nnadi, Oge;
- Zhuang, William;
- Hillson, Nathan J.;
- Keasling, Jay D.;
- Mukhopadhyay, Aindrila
Publication type:
Article
Design, implementation and practice of JBEI-ICE: an open source biological part registry platform and tools.
Published in:
Nucleic Acids Research, 2012, v. 40, n. 18, p. e141, doi. 10.1093/nar/gks531
By:
- Ham, Timothy S.;
- Dmytriv, Zinovii;
- Plahar, Hector;
- Chen, Joanna;
- Hillson, Nathan J.;
- Keasling, Jay D.
Publication type:
Article
Alkaline-SDS cell lysis of microbes with acetone protein precipitation for proteomic sample preparation in 96-well plate format.
Published in:
PLoS ONE, 2023, v. 18, n. 7, p. 1, doi. 10.1371/journal.pone.0288102
By:
- Chen, Yan;
- Gin, Jennifer W.;
- Wang, Ying;
- de Raad, Markus;
- Tan, Stephen;
- Hillson, Nathan J.;
- Northen, Trent R.;
- Adams, Paul D.;
- Petzold, Christopher J.
Publication type:
Article
De novo DNA synthesis using polymerase-nucleotide conjugates.
Published in:
Nature Biotechnology, 2018, v. 36, n. 7, p. 645, doi. 10.1038/nbt.4173
By:
- Palluk, Sebastian;
- Arlow, Daniel H;
- de Rond, Tristan;
- Barthel, Sebastian;
- Kang, Justine S;
- Bector, Rathin;
- Baghdassarian, Hratch M;
- Truong, Alisa N;
- Kim, Peter W;
- Singh, Anup K;
- Hillson, Nathan J;
- Keasling, Jay D
Publication type:
Article
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology.
Published in:
Nature Biotechnology, 2014, v. 32, n. 6, p. 545, doi. 10.1038/nbt.2891
By:
- Galdzicki, Michal;
- Clancy, Kevin P;
- Oberortner, Ernst;
- Pocock, Matthew;
- Quinn, Jacqueline Y;
- Rodriguez, Cesar A;
- Roehner, Nicholas;
- Wilson, Mandy L;
- Adam, Laura;
- Anderson, J Christopher;
- Bartley, Bryan A;
- Beal, Jacob;
- Chandran, Deepak;
- Chen, Joanna;
- Densmore, Douglas;
- Endy, Drew;
- Grünberg, Raik;
- Hallinan, Jennifer;
- Hillson, Nathan J;
- Johnson, Jeffrey D
Publication type:
Article
High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons.
Published in:
Nature Biotechnology, 2007, v. 25, n. 5, p. 584, doi. 10.1038/nbt1294
By:
- McGrath, Patrick T.;
- Lee, Honglak;
- Li Zhang;
- Iniesta, Antonio A.;
- Hottes, Alison K.;
- Meng How Tan;
- Hillson, Nathan J.;
- Ping Hu;
- Shapiro, Lucy;
- McAdams, Harley H.
Publication type:
Article
THE FUSION OF BIOLOGY, COMPUTER SCIENCE, AND ENGINEERING.
Published in:
Perspectives in Biology & Medicine, 2012, v. 55, n. 4, p. 503, doi. 10.1353/pbm.2012.0044
By:
- LINSHIZ, GREGORY;
- GOLDBER, ALEX;
- KONRY, TANIA;
- HILLSON, J. NATHAN
Publication type:
Article
The plant glycosyltransferase clone collection for functional genomics.
Published in:
Plant Journal, 2014, v. 79, n. 3, p. 517, doi. 10.1111/tpj.12577
By:
- Lao, Jeemeng;
- Oikawa, Ai;
- Bromley, Jennifer R.;
- McInerney, Peter;
- Suttangkakul, Anongpat;
- Smith‐Moritz, Andreia M.;
- Plahar, Hector;
- Chiu, Tsan‐Yu;
- González Fernández‐Niño, Susana M.;
- Ebert, Berit;
- Yang, Fan;
- Christiansen, Katy M.;
- Hansen, Sara F.;
- Stonebloom, Solomon;
- Adams, Paul D.;
- Ronald, Pamela C.;
- Hillson, Nathan J.;
- Hadi, Masood Z.;
- Vega‐Sánchez, Miguel E.;
- Loqué, Dominique
Publication type:
Article
Characterization of Wastewater Treatment Plant Microbial Communities and the Effects of Carbon Sources on Diversity in Laboratory Models.
Published in:
PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0105689
By:
- Lee, Sangwon;
- Geller, Jil T.;
- Torok, Tamas;
- Wu, Cindy H.;
- Singer, Mary;
- Reid, Francine C.;
- Tarjan, Daniel R.;
- Hazen, Terry C.;
- Arkin, Adam P.;
- Hillson, Nathan J.
Publication type:
Article
Cloud-Enabled Microscopy and Droplet Microfluidic Platform for Specific Detection of Escherichia coli in Water.
Published in:
PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0086341
By:
- Golberg, Alexander;
- Linshiz, Gregory;
- Kravets, Ilia;
- Stawski, Nina;
- Hillson, Nathan J.;
- Yarmush, Martin L.;
- Marks, Robert S.;
- Konry, Tania
Publication type:
Article
Author Correction: Jungle Express is a versatile repressor system for tight transcriptional control.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07111-2
By:
- Ruegg, Thomas L.;
- Pereira, Jose H.;
- Chen, Joseph C.;
- DeGiovanni, Andy;
- Novichkov, Pavel;
- Mutalik, Vivek K.;
- Tomaleri, Giovani P.;
- Singer, Steven W.;
- Hillson, Nathan J.;
- Simmons, Blake A.;
- Adams, Paul D.;
- Thelen, Michael P.
Publication type:
Article
Repurposing a microfluidic formulation device for automated DNA construction.
Published in:
PLoS ONE, 2020, v. 15, n. 11, p. 1, doi. 10.1371/journal.pone.0242157
By:
- Goyal, Garima;
- Elsbree, Nick;
- Fero, Michael;
- Hillson, Nathan J.;
- Linshiz, Gregory
Publication type:
Article
Cover Feature: Biochemical Characterization of β‐Amino Acid Incorporation in Fluvirucin B2 Biosynthesis (ChemBioChem 13/2018).
Published in:
ChemBioChem, 2018, v. 19, n. 13, p. 1351, doi. 10.1002/cbic.201800299
By:
- Barajas, Jesus F.;
- Zargar, Amin;
- Pang, Bo;
- Benites, Veronica T.;
- Gin, Jennifer;
- Baidoo, Edward E. K.;
- Petzold, Christopher J.;
- Hillson, Nathan J.;
- Keasling, Jay D.
Publication type:
Article
Biochemical Characterization of β‐Amino Acid Incorporation in Fluvirucin B2 Biosynthesis.
Published in:
ChemBioChem, 2018, v. 19, n. 13, p. 1391, doi. 10.1002/cbic.201800169
By:
- Barajas, Jesus F.;
- Zargar, Amin;
- Pang, Bo;
- Benites, Veronica T.;
- Gin, Jennifer;
- Baidoo, Edward E. K.;
- Petzold, Christopher J.;
- Hillson, Nathan J.;
- Keasling, Jay D.
Publication type:
Article
End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis.
Published in:
Journal of Biological Engineering, 2016, v. 10, p. 1, doi. 10.1186/s13036-016-0024-5
By:
- Linshiz, Gregory;
- Jensen, Erik;
- Stawski, Nina;
- Changhao Bi;
- Elsbree, Nick;
- Hong Jiao;
- Jungkyu Kim;
- Mathies, Richard;
- Keasling, Jay D.;
- Hillson, Nathan J.
Publication type:
Article
DeviceEditor visual biological CAD canvas.
Published in:
Journal of Biological Engineering, 2012, v. 6, n. 1, p. 1, doi. 10.1186/1754-1611-6-1
By:
- Chen, Joanna;
- Densmore, Douglas;
- Ham, Timothy S.;
- Keasling, Jay D.;
- Hillson, Nathan J.
Publication type:
Article
Structural insights into dehydratase substrate selection for the borrelidin and fluvirucin polyketide synthases.
Published in:
Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 8, p. 1225, doi. 10.1007/s10295-019-02189-z
By:
- Barajas, Jesus F.;
- McAndrew, Ryan P.;
- Thompson, Mitchell G.;
- Backman, Tyler W. H.;
- Pang, Bo;
- de Rond, Tristan;
- Pereira, Jose H.;
- Benites, Veronica T.;
- Martín, Héctor García;
- Baidoo, Edward E. K.;
- Hillson, Nathan J.;
- Adams, Paul D.;
- Keasling, Jay D.
Publication type:
Article
Proposed design of distributed macroalgal biorefineries: thermodynamics, bioconversion technology, and sustainability implications for developing economies.
Published in:
Biofuels, Bioproducts & Biorefining, 2014, v. 8, n. 1, p. 67, doi. 10.1002/bbb.1438
By:
- Golberg, Alexander;
- Vitkin, Edward;
- Linshiz, Gregory;
- Khan, Sabaa Ahmad;
- Hillson, Nathan J.;
- Yakhini, Zohar;
- Yarmush, Martin L.
Publication type:
Article
Investigation of Proposed Ladderane Biosynthetic Genes from Anammox Bacteria by Heterologous Expression in E. coli.
Published in:
PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0151087
By:
- Javidpour, Pouya;
- Deutsch, Samuel;
- Mutalik, Vivek K.;
- Hillson, Nathan J.;
- Petzold, Christopher J.;
- Keasling, Jay D.;
- Beller, Harry R.
Publication type:
Article
A combinatorial approach to synthetic transcription factor‐promoter combinations for yeast strain engineering.
Published in:
Yeast, 2018, v. 35, n. 3, p. 273, doi. 10.1002/yea.3292
By:
- Dossani, Zain Y.;
- Reider Apel, Amanda;
- Szmidt‐Middleton, Heather;
- Hillson, Nathan J.;
- Deutsch, Samuel;
- Keasling, Jay D.;
- Mukhopadhyay, Aindrila
Publication type:
Article
Ten simple rules for managing laboratory information.
Published in:
PLoS Computational Biology, 2023, v. 19, n. 12, p. 1, doi. 10.1371/journal.pcbi.1011652
By:
- Berezin, Casey-Tyler;
- Aguilera, Luis U.;
- Billerbeck, Sonja;
- Bourne, Philip E.;
- Densmore, Douglas;
- Freemont, Paul;
- Gorochowski, Thomas E.;
- Hernandez, Sarah I.;
- Hillson, Nathan J.;
- King, Connor R.;
- Köpke, Michael;
- Ma, Shuyi;
- Miller, Katie M.;
- Moon, Tae Seok;
- Moore, Jason H.;
- Munsky, Brian;
- Myers, Chris J.;
- Nicholas, Dequina A.;
- Peccoud, Samuel J.;
- Zhou, Wen
Publication type:
Article
Scalable and automated CRISPR-based strain engineering using droplet microfluidics.
Published in:
Microsystems & Nanoengineering, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41378-022-00357-3
By:
- Iwai, Kosuke;
- Wehrs, Maren;
- Garber, Megan;
- Sustarich, Jess;
- Washburn, Lauren;
- Costello, Zachary;
- Kim, Peter W.;
- Ando, David;
- Gaillard, William R.;
- Hillson, Nathan J.;
- Adams, Paul D.;
- Mukhopadhyay, Aindrila;
- Garcia Martin, Hector;
- Singh, Anup K.
Publication type:
Article
Jungle Express is a versatile repressor system for tight transcriptional control.
Published in:
Nature Communications, 2018, p. 1, doi. 10.1038/s41467-018-05857-3
By:
- Ruegg, Thomas L.;
- Pereira, Jose H.;
- Chen, Joseph C.;
- DeGiovanni, Andy;
- Novichkov, Pavel;
- Mutalik, Vivek K.;
- Tomaleri, Giovani P.;
- Singer, Steven W.;
- Hillson, Nathan J.;
- Simmons, Blake A.;
- Adams, Paul D.;
- Thelen, Michael P.
Publication type:
Article
Modular automated bottom-up proteomic sample preparation for high-throughput applications.
Published in:
PLoS ONE, 2022, v. 18, n. 2, p. 1, doi. 10.1371/journal.pone.0264467
By:
- Chen, Yan;
- Kaplan Lease, Nurgul;
- Gin, Jennifer W.;
- Ogorzalek, Tadeusz L.;
- Adams, Paul D.;
- Hillson, Nathan J.;
- Petzold, Christopher J.
Publication type:
Article
Enhancing Terminal Deoxynucleotidyl Transferase Activity on Substrates with 3′ Terminal Structures for Enzymatic De Novo DNA Synthesis.
Published in:
Genes, 2020, v. 11, n. 1, p. 102, doi. 10.3390/genes11010102
By:
- Barthel, Sebastian;
- Palluk, Sebastian;
- Hillson, Nathan J.;
- Keasling, Jay D.;
- Arlow, Daniel H.
Publication type:
Article
Development of a broad-host synthetic biology toolbox for ralstonia eutropha and its application to engineering hydrocarbon biofuel production.
Published in:
Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-107
By:
- Changhao Bi;
- Peter Su;
- Müller, Jana;
- Yi-Chun Yeh;
- Chhabra, Swapnil R.;
- Beller, Harry R.;
- Singer, Steven W.;
- Hillson, Nathan J.
Publication type:
Article

Found: 28

SBOL Visual: A Graphical Language for Genetic Designs.

Fluorescent amplification for next generation sequencing (FA-NGS) library preparation.

A Cas9-based toolkit to program gene expression in Saccharomyces cerevisiae.

Design, implementation and practice of JBEI-ICE: an open source biological part registry platform and tools.

Alkaline-SDS cell lysis of microbes with acetone protein precipitation for proteomic sample preparation in 96-well plate format.

De novo DNA synthesis using polymerase-nucleotide conjugates.

The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology.

High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons.

THE FUSION OF BIOLOGY, COMPUTER SCIENCE, AND ENGINEERING.

The plant glycosyltransferase clone collection for functional genomics.

Characterization of Wastewater Treatment Plant Microbial Communities and the Effects of Carbon Sources on Diversity in Laboratory Models.

Cloud-Enabled Microscopy and Droplet Microfluidic Platform for Specific Detection of <i>Escherichia coli</i> in Water.

Author Correction: Jungle Express is a versatile repressor system for tight transcriptional control.

Repurposing a microfluidic formulation device for automated DNA construction.

Cover Feature: Biochemical Characterization of β‐Amino Acid Incorporation in Fluvirucin B<sub>2</sub> Biosynthesis (ChemBioChem 13/2018).

Biochemical Characterization of β‐Amino Acid Incorporation in Fluvirucin B<sub>2</sub> Biosynthesis.

End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis.

DeviceEditor visual biological CAD canvas.

Structural insights into dehydratase substrate selection for the borrelidin and fluvirucin polyketide synthases.

Proposed design of distributed macroalgal biorefineries: thermodynamics, bioconversion technology, and sustainability implications for developing economies.

Investigation of Proposed Ladderane Biosynthetic Genes from Anammox Bacteria by Heterologous Expression in E. coli.

A combinatorial approach to synthetic transcription factor‐promoter combinations for yeast strain engineering.

Ten simple rules for managing laboratory information.

Scalable and automated CRISPR-based strain engineering using droplet microfluidics.

Jungle Express is a versatile repressor system for tight transcriptional control.

Modular automated bottom-up proteomic sample preparation for high-throughput applications.

Enhancing Terminal Deoxynucleotidyl Transferase Activity on Substrates with 3′ Terminal Structures for Enzymatic De Novo DNA Synthesis.

Development of a broad-host synthetic biology toolbox for ralstonia eutropha and its application to engineering hydrocarbon biofuel production.