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Seq2Struct: a resource for establishing sequence-structure links.
- Published in:
- Bioinformatics, 2005, v. 21, n. 4, p. 551, doi. 10.1093/bioinformatics/bti049
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- Article
NRF2 connects Src tyrosine kinase to ferroptosis resistance in glioblastoma.
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- Life Science Alliance, 2024, v. 7, n. 1, p. 1, doi. 10.26508/lsa.202302205
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- Article
Conserved exchange of paralog proteins during neuronal differentiation.
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- Life Science Alliance, 2022, v. 5, n. 6, p. 1, doi. 10.26508/lsa.202201397
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- Article
Epigenetic priming of an epithelial enhancer by p63 and CTCF controls expression of a skin-restricted gene XP33.
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- Cell Death Discovery, 2023, v. 9, n. 1, p. 1, doi. 10.1038/s41420-023-01716-3
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- Article
Design and properties of a Myc derivative that efficiently homodimerizes.
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- Oncogene, 1998, v. 17, n. 19, p. 2463, doi. 10.1038/sj.onc.1202199
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- Article
WWP1 germline variants are associated with normocephalic autism spectrum disorder.
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- Cell Death & Disease, 2020, v. 11, n. 7, p. 1, doi. 10.1038/s41419-020-2681-z
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- Article
Alternative splicing tends to avoid partial removals of protein-protein interaction sites.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-379
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- Article
Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics.
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- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S9-S1
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- Article
Bioinformatics in Italy: BITS2012, the ninth annual meeting of the Italian Society of Bioinformatics.
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- BMC Bioinformatics, 2013, v. 14, n. Suppl 7, p. 1, doi. 10.1186/1471-2105-14-S7-S1
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- Article
Modeling gene regulatory network motifs using statecharts.
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- BMC Bioinformatics, 2012, v. 13, n. Suppl 4, p. 1, doi. 10.1186/1471-2105-13-S4-S20
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- Article
Identification of binding pockets in protein structures using a knowledge-based potential derived from local structural similarities.
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- BMC Bioinformatics, 2012, v. 13, n. Suppl 4, p. 1, doi. 10.1186/1471-2105-13-S4-S17
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- Article
Bioinformatics in Italy: BITS2011, the Eighth Annual Meeting of the Italian Society of Bioinformatics.
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- BMC Bioinformatics, 2012, v. 13, n. Suppl 4, p. 1, doi. 10.1186/1471-2105-13-S4-I1
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- Article
Exploiting holistic approaches to model specificity in protein phosphorylation.
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- Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00315
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- Article
Computational methods for analysis and inference of kinase/inhibitor relationships.
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- Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00196
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- Article
Variants in MHY7 Gene Cause Arrhythmogenic Cardiomyopathy.
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- Genes, 2021, v. 13, n. 6, p. 793, doi. 10.3390/genes12060793
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- Article
COVID-19 and Genetic Variants of Protein Involved in the SARS-CoV-2 Entry into the Host Cells.
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- Genes, 2020, v. 11, n. 9, p. 1010, doi. 10.3390/genes11091010
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- Article
Cyclosporin A Treatment of Leishmania donovani Reveals Stage-Specific Functions of Cyclophilins in Parasite Proliferation and Viability.
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- PLoS Neglected Tropical Diseases, 2010, v. 4, n. 6, p. 1, doi. 10.1371/journal.pntd.0000729
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- Article
Cyclosporin A Treatment of Leishmania donovani Reveals Stage-Specific Functions of Cyclophilins in Parasite Proliferation and Viability.
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- PLoS Neglected Tropical Diseases, 2010, v. 4, n. 6, p. 1, doi. 10.1371/journal.pntd.0000729
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- Article
DBATE: database of alternative transcripts expression.
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- Database: The Journal of Biological Databases & Curation, 2013, v. 2013, p. 1, doi. 10.1093/database/bat050
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- Article
A Meta-Analysis Approach to Gene Regulatory Network Inference Identifies Key Regulators of Cardiovascular Diseases.
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- International Journal of Molecular Sciences, 2024, v. 25, n. 8, p. 4224, doi. 10.3390/ijms25084224
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- Article
Role of CTCF Protein in Regulating <i>FMR1</i> Locus Transcription.
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- PLoS Genetics, 2013, v. 9, n. 7, p. 1, doi. 10.1371/journal.pgen.1003601
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- Article
Revealing protein-lncRNA interaction.
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- Briefings in Bioinformatics, 2016, v. 17, n. 1, p. 106, doi. 10.1093/bib/bbv031
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- Article
Inhibition of exosome biogenesis affects cell motility in heterogeneous sub-populations of paediatric-type diffuse high-grade gliomas.
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- Cell & Bioscience, 2023, v. 13, n. 1, p. 1, doi. 10.1186/s13578-023-01166-5
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- Article
FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S2-S2
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- Article
Bioinformatics in Italy: BITS2007, the fourth annual meeting of the Italian Society of Bioinformatics.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S2-S1
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- Article
Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites.
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- BMC Bioinformatics, 2007, v. 8, p. S24, doi. 10.1186/1471-2105-8-S1-S24
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- Article
Bioinformatics in Italy: BITS2006, the third annual meeting of the Italian Society of Bioinformatics.
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- BMC Bioinformatics, 2007, v. 8, p. S1, doi. 10.1186/1471-2105-8-S1-S1
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- Publication type:
- Article
Query3d: a new method for high-throughput analysis of functional residues in protein structures.
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- BMC Bioinformatics, 2005, v. 6, p. S5, doi. 10.1186/1471-2105-6-S4-S5
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- Article
A neural strategy for the inference of SH3 domain-peptide interaction specificity.
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- BMC Bioinformatics, 2005, v. 6, p. S13, doi. 10.1186/1471-2105-6-S4-S13
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- Article
Overview of BITS2005, the Second Annual Meeting of the Italian Bioinformatics Society.
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- BMC Bioinformatics, 2005, v. 6, p. S1, doi. 10.1186/1471-2105-6-S4-S1
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- Article
Functional annotation by identification of local surface similarities: a novel tool for structural genomics.
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- BMC Bioinformatics, 2005, v. 6, p. 194, doi. 10.1186/1471-2105-6-194
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- Article
A structural study for the optimisation of functional motifs encoded in protein sequences.
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- BMC Bioinformatics, 2004, v. 5, p. 50, doi. 10.1186/1471-2105-5-50
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- Article
Kinome-wide identification of phosphorylation networks in eukaryotic proteomes.
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- Bioinformatics, 2019, v. 35, n. 3, p. 372, doi. 10.1093/bioinformatics/bty545
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- Article
BEAM web server: a tool for structural RNA motif discovery.
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- Bioinformatics, 2018, v. 34, n. 6, p. 1058, doi. 10.1093/bioinformatics/btx704
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- Article
Modeling cancer drug response through drug-specific informative genes.
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- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-50720-0
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- Article
Identification of Nucleotide-Binding Sites in Protein Structures: A Novel Approach Based on Nucleotide Modularity.
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- PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0050240
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- Article
Superpose3D: A Local Structural Comparison Program That Allows for User-Defined Structure Representations.
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- PLoS ONE, 2010, v. 5, n. 8, p. 1, doi. 10.1371/journal.pone.0011988
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- Article
Identification of Leishmania-specific protein phosphorylation sites by LC-ESI-MS/MS and comparative genomics analyses.
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- Proteomics, 2010, v. 10, n. 21, p. 3868, doi. 10.1002/pmic.201000305
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- Article
Corrigendum: AMBRA1 links autophagy to cell proliferation and tumorigenesis by promoting c-Myc dephosphorylation and degradation.
- Published in:
- Nature Cell Biology, 2015, v. 17, n. 5, p. 706, doi. 10.1038/ncb3171
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- Article
AMBRA1 links autophagy to cell proliferation and tumorigenesis by promoting c-Myc dephosphorylation and degradation.
- Published in:
- Nature Cell Biology, 2015, v. 17, n. 1, p. 20, doi. 10.1038/ncb3072
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- Article
Structural Defects of Laminin β3 N-terminus Underlie Junctional Epidermolysis Bullosa with Altered Granulation Tissue Response.
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- Acta Dermato-Venereologica, 2016, v. 96, n. 7, p. 954, doi. 10.2340/00015555-2439
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- Article
COTAN: scRNA-seq data analysis based on gene co-expression.
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- NAR Genomics & Bioinformatics, 2021, v. 3, n. 3, p. 1, doi. 10.1093/nargab/lqab072
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- Article
BRIO: a web server for RNA sequence and structure motif scan.
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- Nucleic Acids Research, 2021, v. 49, n. W1, p. W67, doi. 10.1093/nar/gkab400
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- Article
Discovering sequence and structure landscapes in RNA interaction motifs.
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- Nucleic Acids Research, 2019, v. 47, n. 10, p. 4958, doi. 10.1093/nar/gkz250
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- Article
A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications.
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- Nucleic Acids Research, 2016, v. 44, n. 18, p. 8600, doi. 10.1093/nar/gkw750
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- Article
Web-Beagle: a web server for the alignment of RNA secondary structures.
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- Nucleic Acids Research, 2015, v. 43, n. W1, p. W493, doi. 10.1093/nar/gkv489
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- Article
A novel approach to represent and compare RNA secondary structures.
- Published in:
- Nucleic Acids Research, 2014, v. 42, n. 10, p. 6146, doi. 10.1093/nar/gku283
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- Article
Nucleos: a web server for the identification of nucleotide-binding sites in protein structures.
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- Nucleic Acids Research, 2013, v. 41, p. W281, doi. 10.1093/nar/gkt390
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- Article
Phosfinder: a web server for the identification of phosphate-binding sites on protein structures.
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- Nucleic Acids Research, 2011, v. 39, n. suppl_2, p. W278, doi. 10.1093/nar/gkr389
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- Article
Phosphate binding sites identification in protein structures.
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- Nucleic Acids Research, 2011, v. 39, n. 4, p. 1231, doi. 10.1093/nar/gkq987
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- Article