Works by He, Shaomei

Results: 19

Polyphosphate kinase genes from full-scale activated sludge plants.

Published in:

Applied Microbiology & Biotechnology, 2007, v. 77, n. 1, p. 167, doi. 10.1007/s00253-007-1122-6

By:

McMahon, Katherine D.;
Yilmaz, Suzan;
He, Shaomei;
Gall, Daniel L.;
Jenkins, David;
Keasling, Jay D.

Publication type:

Article

Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities.

Published in:

Nature Biotechnology, 2006, v. 24, n. 10, p. 1263, doi. 10.1038/nbt1247

By:

Martín, Héctor García;
Ivanova, Natalia;
Kunin, Victor;
Warnecke, Falk;
Barry, Kerrie W.;
McHardy, Alice C.;
Yeates, Christine;
He, Shaomei;
Salamov, Asaf A.;
Szeto, Ernest;
Dalin, Eileen;
Putnam, Nik H.;
Shapiro, Harris J.;
Pangilinan, Jasmyn L.;
Rigoutsos, Isidore;
Kyrpides, Nikos C.;
Blackall, Linda Louise;
McMahon, Katherine D.;
Hugenholtz, Philip

Publication type:

Article

Perceived social support and diet quality among ethnic minority groups in Yunnan Province, Southwestern China: a cross-sectional study.

Published in:

2021

By:

Zhang, Qiang;
Ruan, Yuan;
Hu, Wenmin;
Li, Juanjuan;
Zhao, Jiang;
Peng, Min;
Wan, Rong;
Min, Xiangdong;
He, Shaomei;
Liu, Zhitao

Publication type:

journal article

Systematic gene therapy derived from an investigative study of AAV2/8 vector gene therapy for Fabry disease.

Published in:

Orphanet Journal of Rare Diseases, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s13023-023-02894-0

By:

Deng, Mulan;
Zhou, Hongyu;
He, Shaomei;
Qiu, Haoheng;
Wang, Yanping;
Zhao, April Yuanyi;
Mu, Yunping;
Li, Fanghong;
Zhao, Allan Zijian

Publication type:

Article

Environmental predictors of electroactive bacterioplankton in small boreal lakes.

Published in:

Environmental Microbiology, 2023, v. 25, n. 3, p. 705, doi. 10.1111/1462-2920.16314

By:

Olmsted, Charles N.;
Ort, Roger;
Tran, Patricia Q.;
McDaniel, Elizabeth A.;
Roden, Eric E.;
Bond, Daniel R.;
He, Shaomei;
McMahon, Katherine D.

Publication type:

Article

Metatranscriptomic array analysis of ‘ Candidatus Accumulibacter phosphatis’-enriched enhanced biological phosphorus removal sludge.

Published in:

Environmental Microbiology, 2010, v. 12, n. 5, p. 1205, doi. 10.1111/j.1462-2920.2010.02163.x

By:

Shaomei He;
Kunin, Victor;
Haynes, Matthew;
Martin, Hector Garcia;
Ivanova, Natalia;
Rohwer, Forest;
Hugenholtz, Philip;
McMahon, Katherine D.

Publication type:

Article

Diversity, distribution, and expression of opsin genes in freshwater lakes.

Published in:

Molecular Ecology, 2023, v. 32, n. 11, p. 2798, doi. 10.1111/mec.16891

By:

He, Shaomei;
Linz, Alexandra M.;
Stevens, Sarah L. R.;
Tran, Patricia Q.;
Moya‐Flores, Francisco;
Oyserman, Ben O.;
Dwulit‐Smith, Jeffrey R.;
Forest, Katrina T.;
McMahon, Katherine D.

Publication type:

Article

Microbiology of ' Candidatus Accumulibacter' in activated sludge.

Published in:

Microbial Biotechnology, 2011, v. 4, n. 5, p. 603, doi. 10.1111/j.1751-7915.2011.00248.x

By:

He, Shaomei;
McMahon, Katherine D.

Publication type:

Article

Comparative Genomic Analysis of Neutrophilic Iron(II) Oxidizer Genomes for Candidate Genes in Extracellular Electron Transfer.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01584

By:

Shaomei He;
Barco, Roman A.;
Emerson, David;
Roden, Eric E.

Publication type:

Article

:771. doi: 10.3389/fmicb.2015.00771 Primer and platform effects on 16S rRNA tag sequencing.

Published in:

Frontiers in Microbiology, 2015, p. 1, doi. 10.3389/fmicb.2015.00771

By:

Tremblay, Julien;
Singh, Kanwar;
Fern, Alison;
Kirton, Edward S.;
Shaomei He;
Tanja Woyke;
Lee, Janey;
Feng Chen;
Dangl, Jeffery L.;
Tringe, Susannah G.;
Biddle, Jennifer F.;
Saha, Surya

Publication type:

Article

Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 12, p. 2301, doi. 10.1038/ismej.2013.117

By:

Flowers, Jason J;
He, Shaomei;
Malfatti, Stephanie;
del Rio, Tijana Glavina;
Tringe, Susannah G;
Hugenholtz, Philip;
McMahon, Katherine D

Publication type:

Article

'Candidatus Accumulibacter' gene expression in response to dynamic EBPR conditions.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 2, p. 329, doi. 10.1038/ismej.2010.127

By:

He, Shaomei;
McMahon, Katherine D

Publication type:

Article

Freshwater carbon and nutrient cycles revealed through reconstructed population genomes.

Published in:

PeerJ, 2018, p. 1, doi. 10.7717/peerj.6075

By:

Linz, Alexandra M.;
Shaomei He;
Stevens, Sarah L. R.;
Anantharaman, Karthik;
Rohwer, Robin R.;
Malmstrom, Rex R.;
Bertilsson, Stefan;
McMahon, Katherine D.

Publication type:

Article

Validation of two ribosomal RNA removal methods for microbial metatranscriptomics.

Published in:

Nature Methods, 2010, v. 7, n. 10, p. 807, doi. 10.1038/nmeth.1507

By:

Shaomei He;
Wurtzel, Omri;
Singh, Kanwar;
Froula, Jeff L.;
Yilmaz, Suzan;
Tringe, Susannah G.;
Zhong Wang;
Feng Chen;
Lindquist, Erika A.;
Sorek, Rotem;
Hugenholtz, Philip

Publication type:

Article

Investigating the Composition and Metabolic Potential of Microbial Communities in Chocolate Pots Hot Springs.

Published in:

Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.02075

By:

Fortney, Nathaniel W.;
He, Shaomei;
Converse, Brandon J.;
Boyd, Eric S.;
Roden, Eric E.

Publication type:

Article

Comparative Metagenomic and Metatranscriptomic Analysis of Hindgut Paunch Microbiota in Wood- and Dung-Feeding Higher Termites.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0061126

By:

He, Shaomei;
Ivanova, Natalia;
Kirton, Edward;
Allgaier, Martin;
Bergin, Claudia;
Scheffrahn, Rudolf H.;
Kyrpides, Nikos C.;
Warnecke, Falk;
Tringe, Susannah G.;
Hugenholtz, Philip

Publication type:

Article

Phage Encoded H-NS: A Potential Achilles Heel in the Bacterial Defence System.

Published in:

PLoS ONE, 2011, v. 6, n. 5, p. 1, doi. 10.1371/journal.pone.0020095

By:

Skennerton, Connor T.;
Angly, Florent E.;
Breitbart, Mya;
Bragg, Lauren;
Shaomei He;
McMahon, Katherine D.;
Hugenholtz, Philip;
Tyson, Gene W.

Publication type:

Article

Progress Toward Understanding the Distribution of Accumulibacter Among Full-Scale Enhanced Biological Phosphorus Removal Systems.

Published in:

Microbial Ecology, 2008, v. 55, n. 2, p. 229, doi. 10.1007/s00248-007-9270-x

By:

Shaomei He;
Gu, April Z.;
McMahon, Katherine D.

Publication type:

Article

Denitrification capabilities of two biological phosphorus removal sludges dominated by different ' Candidatus Accumulibacter' clades.

Published in:

Environmental Microbiology Reports, 2009, v. 1, n. 6, p. 583, doi. 10.1111/j.1758-2229.2009.00090.x

By:

Flowers, Jason J.;
He, Shaomei;
Yilmaz, Safak;
Noguera, Daniel R.;
McMahon, Katherine D.

Publication type:

Article