Works by Hauser, Loren

Results: 37
    1

    The Genome of Deep-Sea Vent Chemolithoautotroph Thiomicrospira crunogena XCL-2.

    Published in:
    PLoS Biology, 2006, v. 4, n. 12, p. 2196, doi. 10.1371/journal.pbio.0040383
    By:
    • Scott, Kathleen M.;
    • Sievert, Stefan M.;
    • Abril, Fereniki N.;
    • Ball, Lois A.;
    • Barrett, Chantell J.;
    • Blake, Rodrigo A.;
    • Boller, Amanda J.;
    • Chain, Patrick S. G.;
    • Clark, Justine A.;
    • Davis, Carisa R.;
    • Detter, Chris;
    • Do, Kimberly F.;
    • Dobrinski, Kimberly P.;
    • Faza, Brandon I.;
    • Fitzpatrick, Kelly A.;
    • Freyermuth, Sharyn K.;
    • Harmer, Tara L.;
    • Hauser, Loren J.;
    • Hügler, Michael;
    • Kerfeld, Cheryl A.
    Publication type:
    Article
    2
    3

    Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34.

    Published in:
    Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0194-2
    By:
    • Anderson, Iain J.;
    • DasSarma, Priya;
    • Lucas, Susan;
    • Copeland, Alex;
    • Lapidus, Alla;
    • Del Rio, Tijana Glavina;
    • Tice, Hope;
    • Dalin, Eileen;
    • Bruce, David C.;
    • Goodwin, Lynne;
    • Pitluck, Sam;
    • Sims, David;
    • Brettin, Thomas S.;
    • Detter, John C.;
    • Han, Cliff S.;
    • Larimer, Frank;
    • Hauser, Loren;
    • Land, Miriam;
    • Ivanova, Natalia;
    • Richardson, Paul
    Publication type:
    Article
    4

    Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477<sup>T</sup>).

    Published in:
    Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0162-x
    By:
    • Kappler, Ulrike;
    • Davenport, Karen;
    • Beatson, Scott;
    • Lapidus, Alla;
    • Pan, Chongle;
    • Han, Cliff;
    • del Carmen Montero-Calasanz, Maria;
    • Land, Miriam;
    • Hauser, Loren;
    • Rohde, Manfred;
    • Göker, Markus;
    • Ivanova, Natalia;
    • Woyke, Tanja;
    • Klenk, Hans-Peter;
    • Kyrpides, Nikos C.
    Publication type:
    Article
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    Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4.

    Published in:
    Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0041-x
    By:
    • Shetty, Ameesha R.;
    • de Gannes, Vidya;
    • Obi, Chioma C.;
    • Lucas, Susan;
    • Lapidus, Alla;
    • Jan-Fang Cheng;
    • Goodwin, Lynne A.;
    • Pitluck, Samuel;
    • Peters, Linda;
    • Mikhailova, Natalia;
    • Teshima, Hazuki;
    • Han, Cliff;
    • Tapia, Roxanne;
    • Land, Miriam;
    • Hauser, Loren J.;
    • Kyrpides, Nikos;
    • Ivanova, Natalia;
    • Pagani, Ioanna;
    • Chain, Patrick S. G.;
    • Denef, Vincent J
    Publication type:
    Article
    8

    Complete Genome sequence of Burkholderia phymatum STM815, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species.

    Published in:
    Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 763, doi. 10.4056/sigs.4861021
    By:
    • Moulin, Lionel;
    • Klonowska, Agnieszka;
    • Caroline, Bournaud;
    • Booth, Kristina;
    • Vriezen, Jan;
    • Melkonian, Rémy;
    • James, Euan;
    • Young, J.;
    • Bena, Gilles;
    • Hauser, Loren;
    • Land, Miriam;
    • Kyrpides, Nikos;
    • Bruce, David;
    • Chain, Patrick;
    • Copeland, Alex;
    • Pitluck, Sam;
    • Woyke, Tanja;
    • Lizotte-Waniewski, Michelle;
    • Bristow, Jim;
    • Riley, Margaret
    Publication type:
    Article
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    Permanent draft genome sequence of Comamonas testosteroni KF-1.

    Published in:
    Standards in Genomic Sciences, 2013, v. 8, n. 2, p. 239, doi. 10.4056/sigs.3847890
    By:
    • Weiss, Michael;
    • Kesberg, Anna;
    • LaButti, Kurt;
    • Pitluck, Sam;
    • Bruce, David;
    • Hauser, Loren;
    • Copeland, Alex;
    • Woyke, Tanja;
    • Lowry, Stephen;
    • Lucas, Susan;
    • Land, Miriam;
    • Goodwin, Lynne;
    • Kjelleberg, Staffan;
    • Cook, Alasdair;
    • Buhmann, Matthias;
    • Thomas, Torsten;
    • Schleheck, David
    Publication type:
    Article
    12

    Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL<sup>T</sup>).

    Published in:
    Standards in Genomic Sciences, 2012, v. 7, n. 2, p. 304, doi. 10.4056/sigs.3226659
    By:
    • Spring, Stefan;
    • Visser, Michael;
    • Lu, Megan;
    • Copeland, Alex;
    • Lapidus, Alla;
    • Lucas, Susan;
    • Jan-Fang Cheng;
    • Han, Cliff;
    • Tapia, Roxanne;
    • Goodwin, Lynne A.;
    • Pitluck, Sam;
    • Ivanova, Natalia;
    • Land, Miriam;
    • Hauser, Loren;
    • Larimer, Frank;
    • Rohde, Manfred;
    • Göker, Markus;
    • Detter, John C.;
    • Kyrpides, Nikos C.;
    • Woyke, Tanja
    Publication type:
    Article
    13

    Complete genome sequence of the plant-associated Serratia plymuthica strain AS13.

    Published in:
    Standards in Genomic Sciences, 2012, v. 7, n. 1, p. 22, doi. 10.4056/sigs.2966299
    By:
    • Neupane, Saraswoti;
    • Finlay, Roger D.;
    • Kyrpides, Nikos C.;
    • Goodwin, Lynne;
    • Alström, Sadhna;
    • Lucas, Susan;
    • Land, Miriam;
    • Han, James;
    • Lapidus, Alla;
    • Jan-Fang Cheng;
    • Bruce, David;
    • Pitluck, Sam;
    • Peters, Lin;
    • Ovchinnikova, Galina;
    • Held, Brittany;
    • Cliff Han;
    • Detter, John C.;
    • Tapia, Roxanne;
    • Hauser, Loren;
    • Ivanova, Natalia
    Publication type:
    Article
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    Insights from 20 years of bacterial genome sequencing.

    Published in:
    Functional & Integrative Genomics, 2015, v. 15, n. 2, p. 141, doi. 10.1007/s10142-015-0433-4
    By:
    • Land, Miriam;
    • Hauser, Loren;
    • Jun, Se-Ran;
    • Nookaew, Intawat;
    • Leuze, Michael;
    • Ahn, Tae-Hyuk;
    • Karpinets, Tatiana;
    • Lund, Ole;
    • Kora, Guruprased;
    • Wassenaar, Trudy;
    • Poudel, Suresh;
    • Ussery, David
    Publication type:
    Article
    22

    Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation.

    Published in:
    Nature, 2003, v. 424, n. 6952, p. 1042, doi. 10.1038/nature01947
    By:
    • Rocap, Cabrielle;
    • Larimer, Frank W.;
    • Lamerdin, Jane;
    • Malfatti, Stephanie;
    • Chain, Patrick;
    • Ahlgren, Nathan A.;
    • Arellano, Andrae;
    • Coleman, Maureen;
    • Hauser, Loren;
    • Hess, Wolfgang R.;
    • Johnson, Zackary I.;
    • Land, Miriam;
    • Lindell, Debbie;
    • Post, Anton F.;
    • Regala, Warren;
    • Shah, Manesh;
    • Shaw, Stephanie L.;
    • Steglich, Claudia;
    • Sullivan, Matthew B.;
    • Ting, Claire S.
    Publication type:
    Article
    23

    Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels.

    Published in:
    PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0118285
    By:
    • Petit, Elsa;
    • Coppi, Maddalena V.;
    • Hayes, James C.;
    • Tolonen, Andrew C.;
    • Warnick, Thomas;
    • Latouf, William G.;
    • Amisano, Danielle;
    • Biddle, Amy;
    • Mukherjee, Supratim;
    • Ivanova, Natalia;
    • Lykidis, Athanassios;
    • Land, Miriam;
    • Hauser, Loren;
    • Kyrpides, Nikos;
    • Henrissat, Bernard;
    • Lau, Joanne;
    • Schnell, Danny J.;
    • Church, George M.;
    • Leschine, Susan B.;
    • Blanchard, Jeffrey L.
    Publication type:
    Article
    24

    Genome Analysis and Physiological Comparison of <i>Alicycliphilus denitrificans</i> Strains BC and K601<sup>T</sup>.

    Published in:
    PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0066971
    By:
    • Oosterkamp, Margreet J.;
    • Veuskens, Teun;
    • Talarico Saia, Flávia;
    • Weelink, Sander A. B.;
    • Goodwin, Lynne A.;
    • Daligault, Hajnalka E.;
    • Bruce, David C.;
    • Detter, John C.;
    • Tapia, Roxanne;
    • Han, Cliff S.;
    • Land, Miriam L.;
    • Hauser, Loren J.;
    • Langenhoff, Alette A. M.;
    • Gerritse, Jan;
    • van Berkel, Willem J. H.;
    • Pieper, Dietmar H.;
    • Junca, Howard;
    • Smidt, Hauke;
    • Schraa, Gosse;
    • Davids, Mark
    Publication type:
    Article
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    Improved genome annotation for Zymomonas mobilis.

    Published in:
    2009
    By:
    • Shihui Yang;
    • Pappas, Katherine M;
    • Hauser, Loren J;
    • Land, Miriam L;
    • Gwo-Liang Chen;
    • Hurst, Gregory B;
    • Pan, Chongle;
    • Kouvelis, Vassili N;
    • Typas, Milton A;
    • Pelletier, Dale A;
    • Klingeman, Dawn M;
    • Yun-Juan Chang;
    • Samatova, Nagiza F;
    • Brown, Steven D
    Publication type:
    Letter
    30

    Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris.

    Published in:
    Nature Biotechnology, 2004, v. 22, n. 1, p. 55, doi. 10.1038/nbt923
    By:
    • Chain, Patrick;
    • Hauser, Loren;
    • Lamerdin, Jane;
    • Malfatti, Stephanie;
    • Do, Long;
    • Bobst, Cedric;
    • Gibson, Jane;
    • Peres, Caroline;
    • Larimer, Frank W.;
    • Land, Miriam L.;
    • Pelletier, Dale A.;
    • Beatty, J. Thomas;
    • Lang, Andrew S.;
    • Tabita, F. Robert;
    • Gibson, Janet L.;
    • Hanson, Thomas E.;
    • Torres y Torres, Janelle L.;
    • Harrison, Faith H.;
    • Harwood, Caroline S.
    Publication type:
    Article
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    Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti.

    Published in:
    BMC Genomics, 2011, v. 12, n. 1, p. 235, doi. 10.1186/1471-2164-12-235
    By:
    • Galardini, Marco;
    • Mengoni, Alessio;
    • Brilli, Matteo;
    • Pini, Francesco;
    • Fioravanti, Antonella;
    • Lucas, Susan;
    • Lapidus, Alla;
    • Jan-Fang Cheng;
    • Goodwin, Lynne;
    • Pitluck, Samuel;
    • Land, Miriam;
    • Hauser, Loren;
    • Woyke, Tanja;
    • Mikhailova, Natalia;
    • Ivanova, Natalia;
    • Daligault, Hajnalka;
    • Bruce, David;
    • Detter, Chris;
    • Tapia, Roxanne;
    • Han, Cliff
    Publication type:
    Article
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    Global transcriptome analysis of Clostridium thermocellum ATCC 27405 during growth on dilute acid pretreated Populus and switchgrass.

    Published in:
    Biotechnology for Biofuels, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1754-6834-6-179
    By:
    • Wilson, Charlotte M.;
    • Rodriguez Jr., Miguel;
    • Johnson, Courtney M.;
    • Martin, Stanton L.;
    • Tzu Ming Chu;
    • Wolfinger, Russ D.;
    • Hauser, Loren J.;
    • Land, Miriam L.;
    • Klingeman, Dawn M.;
    • Syed, Mustafa H.;
    • Ragauskas, Arthur J.;
    • Tschaplinski, Timothy J.;
    • Mielenz, Jonathan R.;
    • Brown, Steven D.
    Publication type:
    Article
    36

    The Evolution of Host Specialization in the Vertebrate Gut Symbiont Lactobacillus reuteri.

    Published in:
    PLoS Genetics, 2011, v. 7, n. 2, p. 1, doi. 10.1371/journal.pgen.1001314
    By:
    • Frese, Steven A.;
    • Benson, Andrew K.;
    • Tannock, Gerald W.;
    • Loach, Diane M.;
    • Jaehyoung Kim;
    • Min Zhang;
    • Phaik Lyn Oh;
    • Heng, Nicholas C. K.;
    • Patil, Prabhu B.;
    • Juge, Nathalie;
    • MacKenzie, Donald A.;
    • Pearson, Bruce M.;
    • Lapidus, Alla;
    • Dalin, Eileen;
    • Tice, Hope;
    • Goltsman, Eugene;
    • Land, Miriam;
    • Hauser, Loren;
    • Ivanova, Natalia;
    • Kyrpides, Nikos C.
    Publication type:
    Article
    37

    Complete Genome Sequence of the Complex Carbohydrate-Degrading Marine Bacterium, Saccharophagus degradans Strain 2-40<sup>T</sup>.

    Published in:
    PLoS Genetics, 2008, v. 4, n. 5, p. 1, doi. 10.1371/journal.pgen.1000087
    By:
    • Weiner, Ronald M.;
    • Taylor II, Larry E.;
    • Henrissat, Bernard;
    • Hauser, Loren;
    • Land, Miriam;
    • Coutinho, Pedro M.;
    • Rancurel, Corinne;
    • Saunders, Elizabeth H.;
    • Longmire, Atkinson G.;
    • Haitao Zhang;
    • Bayer, Edward A.;
    • Gilbert, Harry J.;
    • Larimer, Frank;
    • Zhulin, Igor B.;
    • Ekborg, Nathan A.;
    • Lamed, Raphael;
    • Richardson, Paul M.;
    • Borovok, Ilya;
    • Hutcheson, Steven
    Publication type:
    Article