Works by Hatt, Janet K.

Results: 18

imGLAD: accurate detection and quantification of target organisms in metagenomes.
Published in:
PeerJ, 2018, p. 1, doi. 10.7717/peerj.5882
By:
- Castro, Juan C.;
- Rodriguez-R, Luis M.;
- Harvey, William T.;
- Weigand, Michael R.;
- Hatt, Janet K.;
- Carter, Michelle Q.;
- Konstantinidis, Konstantinos T.
Publication type:
Article
Microbial species and intraspecies units exist and are maintained by ecological cohesiveness coupled to high homologous recombination.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-53787-0
By:
- Conrad, Roth E.;
- Brink, Catherine E.;
- Viver, Tomeu;
- Rodriguez-R, Luis M.;
- Aldeguer-Riquelme, Borja;
- Hatt, Janet K.;
- Venter, Stephanus N.;
- Rossello-Mora, Ramon;
- Amann, Rudolf;
- Konstantinidis, Konstantinos T.
Publication type:
Article
The influence of alfalfa‐switchgrass intercropping on microbial community structure and function.
Published in:
Environmental Microbiology, 2021, v. 23, n. 11, p. 6828, doi. 10.1111/1462-2920.15785
By:
- Cha, Gyuhyon;
- Meinhardt, Kelley A.;
- Orellana, Luis H.;
- Hatt, Janet K.;
- Pannu, Manmeet W.;
- Stahl, David A.;
- Konstantinidis, Konstantinos T.
Publication type:
Article
Genome repository of oil systems: An interactive and searchable database that expands the catalogued diversity of crude oil‐associated microbes.
Published in:
Environmental Microbiology, 2020, v. 22, n. 6, p. 2094, doi. 10.1111/1462-2920.14966
By:
- Karthikeyan, Smruthi;
- Rodriguez‐R, Luis M.;
- Heritier‐Robbins, Patrick;
- Hatt, Janet K.;
- Huettel, Markus;
- Kostka, Joel E.;
- Konstantinidis, Konstantinos T.
Publication type:
Article
Predominance of deterministic microbial community dynamics in salterns exposed to different light intensities.
Published in:
Environmental Microbiology, 2019, v. 21, n. 11, p. 4300, doi. 10.1111/1462-2920.14790
By:
- Viver, Tomeu;
- Orellana, Luis H.;
- Díaz, Sara;
- Urdiain, Mercedes;
- Ramos‐Barbero, María Dolores;
- González‐Pastor, José E.;
- Oren, Aharon;
- Hatt, Janet K.;
- Amann, Rudolf;
- Antón, Josefa;
- Konstantinidis, Konstantinos T.;
- Rosselló‐Móra, Ramon
Publication type:
Article
Intensive allochthonous inputs along the Ganges River and their effect on microbial community composition and dynamics.
Published in:
Environmental Microbiology, 2019, v. 21, n. 1, p. 182, doi. 10.1111/1462-2920.14439
By:
- Zhang, Si‐Yu;
- Tsementzi, Despina;
- Hatt, Janet K.;
- Bivins, Aaron;
- Khelurkar, Nikunj;
- Brown, Joe;
- Tripathi, Sachchida Nand;
- Konstantinidis, Konstantinos T.
Publication type:
Article
The low diverse gastric microbiome of the jellyfish Cotylorhiza tuberculata is dominated by four novel taxa.
Published in:
Environmental Microbiology, 2017, v. 19, n. 8, p. 3039, doi. 10.1111/1462-2920.13763
By:
- Viver, Tomeu;
- Orellana, Luis H.;
- Hatt, Janet K.;
- Urdiain, Mercedes;
- Díaz, Sara;
- Richter, Michael;
- Antón, Josefa;
- Avian, Massimo;
- Amann, Rudolf;
- Konstantinidis, Konstantinos T.;
- Rosselló ‐ Móra, Ramon
Publication type:
Article
Fecal microbiota transplantation promotes reduction of antimicrobial resistance by strain replacement.
Published in:
Science Translational Medicine, 2023, v. 15, n. 720, p. 1, doi. 10.1126/scitranslmed.abo2750
By:
- Woodworth, Michael H.;
- Conrad, Roth E.;
- Haldopoulos, Marina;
- Pouch, Stephanie M.;
- Babiker, Ahmed;
- Mehta, Aneesh K.;
- Sitchenko, Kaitlin L.;
- Wang, Charlotte H.;
- Strudwick, Amanda;
- Ingersoll, Jessica M.;
- Philippe, Cécile;
- Lohsen, Sarah;
- Kocaman, Kumru;
- Lindner, Blake G.;
- Hatt, Janet K.;
- Jones, Rheinallt M.;
- Miller, Candace;
- Neish, Andrew S.;
- Friedman-Moraco, Rachel;
- Karadkhele, Geeta
Publication type:
Article
Toward quantifying the adaptive role of bacterial pangenomes during environmental perturbations.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2022, v. 16, n. 5, p. 1222, doi. 10.1038/s41396-021-01149-9
By:
- Conrad, Roth E.;
- Viver, Tomeu;
- Gago, Juan F.;
- Hatt, Janet K.;
- Venter, Stephanus N.;
- Rossello-Mora, Ramon;
- Konstantinidis, Konstantinos T.
Publication type:
Article
Beach sand oil spills select for generalist microbial populations.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2021, v. 15, n. 11, p. 3418, doi. 10.1038/s41396-021-01017-6
By:
- Heritier-Robbins, Patrick;
- Karthikeyan, Smruthi;
- Hatt, Janet K.;
- Kim, Minjae;
- Huettel, Markus;
- Kostka, Joel E.;
- Konstantinidis, Konstantinos T.;
- Rodriguez-R, Luis M.
Publication type:
Article
Distinct ecotypes within a natural haloarchaeal population enable adaptation to changing environmental conditions without causing population sweeps.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2021, v. 15, n. 4, p. 1178, doi. 10.1038/s41396-020-00842-5
By:
- Viver, Tomeu;
- Conrad, Roth E.;
- Orellana, Luis H.;
- Urdiain, Mercedes;
- González-Pastor, José E.;
- Hatt, Janet K.;
- Amann, Rudolf;
- Antón, Josefa;
- Konstantinidis, Konstantinos T.;
- Rosselló-Móra, Ramon
Publication type:
Article
"Candidatus Macondimonas diazotrophica", a novel gammaproteobacterial genus dominating crude-oil-contaminated coastal sediments.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2019, v. 13, n. 8, p. 2129, doi. 10.1038/s41396-019-0400-5
By:
- Karthikeyan, Smruthi;
- Rodriguez-R, Luis M.;
- Heritier-Robbins, Patrick;
- Kim, Minjae;
- Overholt, Will A.;
- Gaby, John C.;
- Hatt, Janet K.;
- Spain, Jim C.;
- Rosselló-Móra, Ramon;
- Huettel, Markus;
- Kostka, Joel E.;
- Konstantinidis, Konstantinos T.
Publication type:
Article
Quantifying the changes in genetic diversity within sequence-discrete bacterial populations across a spatial and temporal riverine gradient.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2019, v. 13, n. 3, p. 767, doi. 10.1038/s41396-018-0307-6
By:
- Meziti, Alexandra;
- Tsementzi, Despina;
- Rodriguez-R, Luis M.;
- Hatt, Janet K.;
- Karayanni, Hera;
- Kormas, Konstantinos A.;
- Konstantinidis, Konstantinos T.
Publication type:
Article
Distribution of Escherichia coli Pathotypes along an Urban-Rural Gradient in Ecuador.
Published in:
American Journal of Tropical Medicine & Hygiene, 2023, v. 109, n. 3, p. 559, doi. 10.4269/ajtmh.23-0167
By:
- Montero, Lorena;
- Smith, Shanon M.;
- Jesser, Kelsey J.;
- Paez, Maritza;
- Ortega, Estefanía;
- Peña-Gonzalez, Angela;
- Soto-Girón, Maria Juliana;
- Hatt, Janet K.;
- Sánchez, Xavier;
- Puebla, Edison;
- Endara, Pablo;
- Cevallos, William;
- Konstantinidis, Konstantinos T.;
- Trueba, Gabriel;
- Levy, Karen
Publication type:
Article
Gut Microbiome Changes with Acute Diarrheal Disease in Urban Versus Rural Settings in Northern Ecuador.
Published in:
American Journal of Tropical Medicine & Hygiene, 2021, v. 104, n. 6, p. 2275, doi. 10.4269/ajtmh.20-0831
By:
- Soto-Girón, Maria J.;
- Peña-Gonzalez, Angela;
- Hatt, Janet K.;
- Montero, Lorena;
- Páez, Maritza;
- Ortega, Estefania;
- Smith, Shanon;
- Cevallos, William;
- Trueba, Gabriel;
- Konstantinidis, Konstantinos T.;
- Levy, Karen
Publication type:
Article
Metagenomics indicate that public health risk may be higher from flooding following dry versus rainy periods.
Published in:
Environmental Microbiology Reports, 2022, v. 14, n. 2, p. 265, doi. 10.1111/1758-2229.13047
By:
- Kim, Minjae;
- Kienast, Yvonne;
- Hatt, Janet K.;
- Kirby, Amy E.;
- Konstantinidis, Konstantinos T.
Publication type:
Article
A novel, divergent alkane monooxygenase (alkB) clade involved in crude oil biodegradation.
Published in:
Environmental Microbiology Reports, 2021, v. 13, n. 6, p. 830, doi. 10.1111/1758-2229.13018
By:
- Karthikeyan, Smruthi;
- Hatt, Janet K.;
- Kim, Minjae;
- Spain, Jim C.;
- Huettel, Markus;
- Kostka, Joel E.;
- Konstantinidis, Konstantinos T.
Publication type:
Article
Prevalence of viral photosynthesis genes along a freshwater to saltwater transect in Southeast USA.
Published in:
Environmental Microbiology Reports, 2019, v. 11, n. 5, p. 672, doi. 10.1111/1758-2229.12780
By:
- Ruiz‐Perez, Carlos A.;
- Tsementzi, Despina;
- Hatt, Janet K.;
- Sullivan, Matthew B.;
- Konstantinidis, Konstantinos T.
Publication type:
Article