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Local Persistence of Novel MRSA Lineage after Hospital Ward Outbreak, Cambridge, UK, 2011-2013.
Published in:
2016
By:
- Toleman, Michelle S.;
- Reuter, Sandra;
- Coll, Francesc;
- Harrison, Ewan M.;
- Peacock, Sharon J.
Publication type:
historical material
Whole genome sequencing identifies zoonotic transmission of MRSA isolates with the novel mecA homologue mecC.
Published in:
EMBO Molecular Medicine, 2013, v. 5, n. 4, p. 509, doi. 10.1002/emmm.201202413
By:
- Harrison, Ewan M.;
- Paterson, Gavin K.;
- Holden, Matthew T.G.;
- Larsen, Jesper;
- Stegger, Marc;
- Larsen, Anders Rhod;
- Petersen, Andreas;
- Skov, Robert L.;
- Christensen, Judit Marta;
- Bak Zeuthen, Anne;
- Heltberg, Ole;
- Harris, Simon R.;
- Zadoks, Ruth N.;
- Parkhill, Julian;
- Peacock, Sharon J.;
- Holmes, Mark A.
Publication type:
Article
Prospective genomic surveillance of meticillin-resistant Staphylococcus aureus (MRSA) associated with bloodstream infection, England, 1 October 2012 to 30 September 2013.
Published in:
Eurosurveillance (15607917), 2019, v. 24, n. 4, p. 42, doi. 10.2807/1560-7917.ES.2019.24.4.1800215
By:
- Toleman, Michelle S.;
- Reuter, Sandra;
- Jamrozy, Dorota;
- Wilson, Hayley J.;
- Blane, Beth;
- Harrison, Ewan M.;
- Coll, Francesc;
- Hope, Russell J.;
- Kearns, Angela;
- Parkhill, Julian;
- Peacock, Sharon J.;
- Török, M. Estée
Publication type:
Article
Tracking SARS-CoV-2 mutations and variants through the COG-UK-Mutation Explorer.
Published in:
Virus Evolution, 2022, v. 8, n. 1, p. 1, doi. 10.1093/ve/veac023
By:
- Wright, Derek W;
- Harvey, William T;
- Hughes, Joseph;
- Cox, MacGregor;
- Peacock, Thomas P;
- Colquhoun, Rachel;
- Jackson, Ben;
- Orton, Richard;
- Nielsen, Morten;
- Hsu, Nienyun Sharon;
- consortium, The COVID-19 Genomics UK (COG-UK);
- Harrison, Ewan M;
- Silva, Thushan I de;
- Rambaut, Andrew;
- Peacock, Sharon J;
- Robertson, David L;
- Carabelli, Alessandro M
Publication type:
Article
Multi-Drug Resistant Staphylococcus aureus Carriage in Abattoir Workers in Busia, Kenya.
Published in:
Antibiotics (2079-6382), 2022, v. 11, n. 12, p. 1726, doi. 10.3390/antibiotics11121726
By:
- Obanda, Benear Apollo;
- Gibbons, Cheryl L.;
- Fèvre, Eric M.;
- Bebora, Lilly;
- Gitao, George;
- Ogara, William;
- Wang, Shu-Hua;
- Gebreyes, Wondwossen;
- Ngetich, Ronald;
- Blane, Beth;
- Coll, Francesc;
- Harrison, Ewan M.;
- Kariuki, Samuel;
- Peacock, Sharon J.;
- Cook, Elizabeth A. J.
Publication type:
Article
A Combined Phenotypic-Genotypic Predictive Algorithm for In Vitro Detection of Bicarbonate: β-Lactam Sensitization among Methicillin-Resistant Staphylococcus aureus (MRSA).
Published in:
Antibiotics (2079-6382), 2021, v. 10, n. 9, p. 1089, doi. 10.3390/antibiotics10091089
By:
- Ersoy, Selvi C.;
- Rose, Warren E.;
- Patel, Robin;
- Proctor, Richard A.;
- Chambers, Henry F.;
- Harrison, Ewan M.;
- Pak, Youngju;
- Bayer, Arnold S.
Publication type:
Article
ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria.
Published in:
Nucleic Acids Research, 2012, p. D621, doi. 10.1093/nar/gkr846
By:
- Bi, Dexi;
- Xu, Zhen;
- Harrison, Ewan M.;
- Tai, Cui;
- Wei, Yiqing;
- He, Xinyi;
- Jia, Shiru;
- Deng, Zixin;
- Rajakumar, Kumar;
- Ou, Hong-Yu
Publication type:
Article
TADB: a web-based resource for Type 2 toxin–antitoxin loci in bacteria and archaea.
Published in:
Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D606, doi. 10.1093/nar/gkq908
By:
- Shao, Yucheng;
- Harrison, Ewan M.;
- Bi, Dexi;
- Tai, Cui;
- He, Xinyi;
- Ou, Hong-Yu;
- Rajakumar, Kumar;
- Deng, Zixin
Publication type:
Article
mGenomeSubtractor: a web-based tool for parallel in silico subtractive hybridization analysis of multiple bacterial genomes.
Published in:
Nucleic Acids Research, 2010, v. 38, n. suppl_2, p. W194, doi. 10.1093/nar/gkq326
By:
- Shao, Yucheng;
- He, Xinyi;
- Harrison, Ewan M.;
- Tai, Cui;
- Ou, Hong-Yu;
- Rajakumar, Kumar;
- Deng, Zixin
Publication type:
Article
MobilomeFINDER: web-based tools for in silico and experimental discovery of bacterial genomic islands.
Published in:
Nucleic Acids Research, 2007, v. 35, n. suppl_2, p. W97
By:
- Ou, Hong-Yu;
- He, Xinyi;
- Harrison, Ewan M.;
- Kulasekara, Bridget R.;
- Thani, Ali Bin;
- Kadioglu, Aras;
- Lory, Stephen;
- Hinton, Jay C. D.;
- Barer, Michael R.;
- Deng, Zixin;
- Rajakumar, Kumar
Publication type:
Article
Cryptic susceptibility to penicillin/β-lactamase inhibitor combinations in emerging multidrug-resistant, hospital-adapted Staphylococcus epidermidis lineages.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-42245-y
By:
- Ba, Xiaoliang;
- Raisen, Claire L.;
- Restif, Olivier;
- Cavaco, Lina Maria;
- Vingsbo Lundberg, Carina;
- Lee, Jean Y. H.;
- Howden, Benjamin P.;
- Bartels, Mette D.;
- Strommenger, Birgit;
- Harrison, Ewan M.;
- Larsen, Anders Rhod;
- Holmes, Mark A.;
- Larsen, Jesper
Publication type:
Article
CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance.
Published in:
2021
By:
- Nicholls, Samuel M.;
- Poplawski, Radoslaw;
- Bull, Matthew J.;
- Underwood, Anthony;
- Chapman, Michael;
- Abu-Dahab, Khalil;
- Taylor, Ben;
- Colquhoun, Rachel M.;
- Rowe, Will P. M.;
- Jackson, Ben;
- Hill, Verity;
- O'Toole, Áine;
- Rey, Sara;
- Southgate, Joel;
- Amato, Roberto;
- Livett, Rich;
- Gonçalves, Sónia;
- Harrison, Ewan M.;
- Peacock, Sharon J.;
- Aanensen, David M.
Publication type:
Editorial
Incidence and Characterisation of Methicillin-Resistant <i>Staphylococcus aureus</i> (MRSA) from Nasal Colonisation in Participants Attending a Cattle Veterinary Conference in the UK.
Published in:
PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0068463
By:
- Paterson, Gavin K.;
- Harrison, Ewan M.;
- Craven, Emily F.;
- Petersen, Andreas;
- Larsen, Anders Rhod;
- Ellington, Matthew J.;
- Török, M. Estée;
- Peacock, Sharon J.;
- Parkhill, Julian;
- Zadoks, Ruth N.;
- Holmes, Mark A.
Publication type:
Article
Systematic Surveillance Detects Multiple Silent Introductions and Household Transmission of Methicillin-Resistant Staphylococcus aureus USA300 in the East of England.
Published in:
2016
By:
- Toleman, Michelle S.;
- Reuter, Sandra;
- Coll, Francesc;
- Harrison, Ewan M.;
- Blane, Beth;
- Brown, Nicholas M.;
- Török, M. Estée;
- Parkhill, Julian;
- Peacock, Sharon J.
Publication type:
journal article
Characteristics of Staphylococcus aureus Isolated from Patients in Busia County Referral Hospital, Kenya.
Published in:
Pathogens, 2022, v. 11, n. 12, p. 1504, doi. 10.3390/pathogens11121504
By:
- Obanda, Benear Apollo;
- Cook, Elizabeth A. J.;
- Fèvre, Eric M.;
- Bebora, Lilly;
- Ogara, William;
- Wang, Shu-Hua;
- Gebreyes, Wondwossen;
- Ngetich, Ronald;
- Wandede, Dolphine;
- Muyodi, Johnstone;
- Blane, Beth;
- Coll, Francesc;
- Harrison, Ewan M.;
- Peacock, Sharon J.;
- Gitao, George C.
Publication type:
Article
Nasal carriage of Staphylococcus pseudintermedius in patients with granulomatosis with polyangiitis.
Published in:
Rheumatology, 2019, v. 58, n. 3, p. 548, doi. 10.1093/rheumatology/key317
By:
- Kronbichler, Andreas;
- Blane, Beth;
- Holmes, Mark A;
- Wagner, Josef;
- Parkhill, Julian;
- Peacock, Sharon J;
- Jayne, David R W;
- Harrison, Ewan M
Publication type:
Article
Capturing the cloud of diversity reveals complexity and heterogeneity of MRSA carriage, infection and transmission.
Published in:
Nature Communications, 2015, v. 6, n. 3, p. 6560, doi. 10.1038/ncomms7560
By:
- Paterson, Gavin K.;
- Harrison, Ewan M.;
- Murray, Gemma G. R.;
- Welch, John J.;
- Warland, James H.;
- Holden, Matthew T. G.;
- Morgan, Fiona J. E.;
- Ba, Xiaoliang;
- Koop, Gerrit;
- Harris, Simon R.;
- Maskell, Duncan J.;
- Peacock, Sharon J.;
- Herrtage, Michael E.;
- Parkhill, Julian;
- Holmes, Mark A.
Publication type:
Article
Longitudinal genomic surveillance of MRSA in the UK reveals transmission patterns in hospitals and the community.
Published in:
Science Translational Medicine, 2017, v. 9, n. 413, p. 1, doi. 10.1126/scitranslmed.aak9745
By:
- Coll, Francesc;
- Harrison, Ewan M.;
- Toleman, Michelle S.;
- Reuter, Sandra;
- Raven, Kathy E.;
- Blane, Beth;
- Palmer, Beverley;
- Kappeler, A. Ruth M.;
- Brown, Nicholas M.;
- Török, M. Estée;
- Parkhill, Julian;
- Peacock, Sharon J.
Publication type:
Article
Investigation of a Cluster of Sequence Type 22 Methicillin-Resistant Staphylococcus aureus Transmission in a Community Setting.
Published in:
Clinical Infectious Diseases, 2017, v. 65, n. 12, p. 2069, doi. 10.1093/cid/cix539
By:
- Toleman, Michelle S.;
- Watkins, Emmeline R.;
- Williams, Tom;
- Blane, Beth;
- Sadler, Belinda;
- Harrison, Ewan M.;
- Coll, Francesc;
- Parkhill, Julian;
- Nazareth, Bernadette;
- Brown, Nicholas M.;
- Peacock, Sharon J.
Publication type:
Article
Evolution of mobile genetic element composition in an epidemic methicillinresistant Staphylococcus aureus: temporal changes correlated with frequent loss and gain events.
Published in:
BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-4065-z
By:
- Jamrozy, Dorota;
- Coll, Francesc;
- Mather, Alison E.;
- Harris, Simon R.;
- Harrison, Ewan M.;
- MacGowan, Alasdair;
- Karas, Andreas;
- Elston, Tony;
- Török, M. Estée;
- Parkhill, Julian;
- Peacock, Sharon J.
Publication type:
Article
Genomic Analysis of Companion Rabbit Staphylococcus aureus.
Published in:
PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0151458
By:
- Holmes, Mark A.;
- Harrison, Ewan M.;
- Fisher, Elizabeth A.;
- Graham, Elizabeth M.;
- Parkhill, Julian;
- Foster, Geoffrey;
- Paterson, Gavin K.
Publication type:
Article
A Site-Specific Integrative Plasmid Found in Pseudomonas aeruginosa Clinical Isolate HS87 along with A Plasmid Carrying an Aminoglycoside-Resistant Gene.
Published in:
PLoS ONE, 2016, v. 11, n. 2, p. 1, doi. 10.1371/journal.pone.0148367
By:
- Bi, Dexi;
- Xie, Yingzhou;
- Tai, Cui;
- Jiang, Xiaofei;
- Zhang, Jie;
- Harrison, Ewan M.;
- Jia, Shiru;
- Deng, Zixin;
- Rajakumar, Kumar;
- Ou, Hong-Yu
Publication type:
Article
A Look into the Melting Pot: The mecC-Harboring Region Is a Recombination Hot Spot in Staphylococcus stepanovicii.
Published in:
PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0147150
By:
- Semmler, Torsten;
- Harrison, Ewan M.;
- Lübke-Becker, Antina;
- Ulrich, Rainer G.;
- Wieler, Lothar H.;
- Guenther, Sebastian;
- Stamm, Ivonne;
- Hanssen, Anne-Merethe;
- Holmes, Mark A.;
- Vincze, Szilvia;
- Walther, Birgit
Publication type:
Article
The composition and functional protein subsystems of the human nasal microbiome in granulomatosis with polyangiitis: a pilot study.
Published in:
Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0753-z
By:
- Wagner, Josef;
- Harrison, Ewan M.;
- Martinez Del Pero, Marcos;
- Blane, Beth;
- Mayer, Gert;
- Leierer, Johannes;
- Gopaluni, Seerapani;
- Holmes, Mark A.;
- Parkhill, Julian;
- Peacock, Sharon J.;
- Jayne, David R. W.;
- Kronbichler, Andreas
Publication type:
Article
Transmission of methicillin-resistant Staphylococcus aureus in long-term care facilities and their related healthcare networks.
Published in:
Genome Medicine, 2016, v. 8, p. 1, doi. 10.1186/s13073-016-0353-5
By:
- Harrison, Ewan M.;
- Ludden, Catherine;
- Brodrick, Hayley J.;
- Blane, Beth;
- Brennan, Gráinne;
- Morris, Dearbháile;
- Coll, Francesc;
- Reuter, Sandra;
- Brown, Nicholas M.;
- Holmes, Mark A.;
- O'Connell, Brian;
- Parkhill, Julian;
- Török, M. Estee;
- Cormican, Martin;
- Peacock, Sharon J.
Publication type:
Article
Whole-genome sequencing reveals transmission of vancomycin-resistant Enterococcus faecium in a healthcare network.
Published in:
Genome Medicine, 2016, v. 8, p. 1, doi. 10.1186/s13073-015-0259-7
By:
- Brodrick, Hayley J.;
- Raven, Kathy E.;
- Harrison, Ewan M.;
- Blane, Beth;
- Reuter, Sandra;
- Török, M. Estée;
- Parkhill, Julian;
- Peacock, Sharon J.
Publication type:
Article
Truncation of GdpP mediates β-lactam resistance in clinical isolates of Staphylococcus aureus.
Published in:
2019
By:
- Ba, Xiaoliang;
- Kalmar, Lajos;
- Hadjirin, Nazreen F;
- Kerschner, Heidrun;
- Apfalter, Petra;
- Morgan, Fiona J;
- Paterson, Gavin K;
- Girvan, Samantha L;
- Zhou, Rui;
- Harrison, Ewan M;
- Holmes, Mark A
Publication type:
journal article
PBP2a substitutions linked to ceftaroline resistance in MRSA isolates from the UK.
Published in:
2016
By:
- Harrison, Ewan M.;
- Xiaoliang Ba;
- Blane, Beth;
- Ellington, Matthew J.;
- Loeffler, Anette;
- Hill, Robert L. R.;
- Holmes, Mark A.;
- Peacock, Sharon J.;
- Ba, Xiaoliang
Publication type:
Letter
Genomic insights into the rapid emergence and evolution of MDR in Staphylococcus pseudintermedius.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2015, v. 70, n. 4, p. 997, doi. 10.1093/jac/dku496
By:
- McCarthy, Alex J.;
- Harrison, Ewan M.;
- Stanczak-Mrozek, Kinga;
- Leggett, Bernadette;
- Waller, Andrew;
- Holmes, Mark A.;
- Lloyd, David H.;
- Lindsay, Jodi A.;
- Loeffler, Anette
Publication type:
Article
A novel hybrid SCCmec-mecC region in Staphylococcus sciuri.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2014, v. 69, n. 4, p. 911, doi. 10.1093/jac/dkt452
By:
- Harrison, Ewan M.;
- Paterson, Gavin K.;
- Holden, Matthew T. G.;
- Ba, Xiaoliang;
- Rolo, Joana;
- Morgan, Fiona J. E.;
- Pichon, Bruno;
- Kearns, Angela;
- Zadoks, Ruth N.;
- Peacock, Sharon J.;
- Parkhill, Julian;
- Holmes, Mark A.
Publication type:
Article
Novel mutations in penicillin-binding protein genes in clinical Staphylococcus aureus isolates that are methicillin resistant on susceptibility testing, but lack the mec gene.
Published in:
2014
By:
- Ba, Xiaoliang;
- Harrison, Ewan M;
- Edwards, Giles F;
- Holden, Matthew T G;
- Larsen, Anders Rhod;
- Petersen, Andreas;
- Skov, Robert L;
- Peacock, Sharon J;
- Parkhill, Julian;
- Paterson, Gavin K;
- Holmes, Mark A
Publication type:
journal article
Novel mutations in penicillin-binding protein genes in clinical Staphylococcus aureus isolates that are methicillin resistant on susceptibility testing, but lack the mec gene.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2014, v. 69, n. 3, p. 594
By:
- Ba, Xiaoliang;
- Harrison, Ewan M.;
- Edwards, Giles F.;
- Holden, Matthew T. G.;
- Larsen, Anders Rhod;
- Petersen, Andreas;
- Skov, Robert L.;
- Peacock, Sharon J.;
- Parkhill, Julian;
- Paterson, Gavin K.;
- Holmes, Mark A.
Publication type:
Article
The effect of genetic structure on molecular dating and tests for temporal signal.
Published in:
Methods in Ecology & Evolution, 2016, v. 7, n. 1, p. 80, doi. 10.1111/2041-210X.12466
By:
- Murray, Gemma G. R.;
- Wang, Fang;
- Harrison, Ewan M.;
- Paterson, Gavin K.;
- Mather, Alison E.;
- Harris, Simon R.;
- Holmes, Mark A.;
- Rambaut, Andrew;
- Welch, John J.;
- Gilbert, M.
Publication type:
Article
Characterization of a novel chaperone/usher fimbrial operon present on KpGI-5, a methionine tRNA gene-associated genomic island in Klebsiella pneumoniae.
Published in:
BMC Microbiology, 2012, v. 12, n. 1, p. 59, doi. 10.1186/1471-2180-12-59
By:
- Aartsen, Jon J.;
- Stahlhut, Steen G.;
- Harrison, Ewan M.;
- Crosatti, Marialuisa;
- Hong-Yu Ou;
- Krogfelt, Karen A.;
- Struve, Carsten;
- Rajakumar, Kumar
Publication type:
Article

Found: 34