Works by Harms, Alexander

Results: 35

Role of conventional immunomarkers, HNF4‐α and SATB2, in the differential diagnosis of pulmonary and colorectal adenocarcinomas.

Published in:

Histopathology, 2018, v. 72, n. 6, p. 997, doi. 10.1111/his.13455

By:

Kriegsmann, Mark;
Harms, Alexander;
Longuespée, Rémi;
Muley, Thomas;
Winter, Hauke;
Kriegsmann, Katharina;
Kazdal, Daniel;
Goeppert, Benjamin;
Pathil, Anita;
Warth, Arne

Publication type:

Article

Gunpowder or Mycetoma?

Published in:

2015

By:

Kriegsmann, Mark;
Harms, Alexander;
Rickerts, Volker;
Andrulis, Mindaugas

Publication type:

Case Study

PasT of Escherichia coli sustains antibiotic tolerance and aerobic respiration as a bacterial homolog of mitochondrial Coq10.

Published in:

MicrobiologyOpen, 2020, v. 9, n. 8, p. 1, doi. 10.1002/mbo3.1064

By:

Fino, Cinzia;
Vestergaard, Martin;
Ingmer, Hanne;
Pierrel, Fabien;
Gerdes, Kenn;
Harms, Alexander

Publication type:

Article

Evolutionary Dynamics of Pathoadaptation Revealed by Three Independent Acquisitions of the VirB/D4 Type IV Secretion System in Bartonella.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 3, p. 761, doi. 10.1093/gbe/evx042

By:

Harms, Alexander;
Segers, Francisca H. I. D.;
Quebatte, Maxime;
Mistl, Claudia;
Manfredi, Pablo;
Körner, Jonas;
Chomel, Bruno B.;
Kosoy, Michael;
Soichi Maruyama;
Engel, Philipp;
Dehio, Christoph

Publication type:

Article

Impact of FDG-PET and Dynamic Contrast-Enhanced MRI in Comparison with DWI for N-Staging in Lung Cancer Patients.

Published in:

Iranian Journal of Radiology, 2019, v. 16, n. 1, p. 1, doi. 10.5812/iranjradiol.68638

By:

Flechsig, Paul;
Zabeck, Heike;
Reubold, Sebastian;
Sachpekidis, Christos;
Rathke, Hendrik;
Röhrich, Manuel;
Holland-Letz, Tim;
Heussel, Claus-Peter;
Harms, Alexander;
Kauczor, Hans-Ulrich;
Haberkorn, Uwe;
Giesel, Frederik L.

Publication type:

Article

Prevalence of somatic mitochondrial mutations and spatial distribution of mitochondria in non-small cell lung cancer.

Published in:

2017

By:

Kazdal, Daniel;
Harms, Alexander;
Endris, Volker;
Penzel, Roland;
Kriegsmann, Mark;
Eichhorn, Florian;
Muley, Thomas;
Stenzinger, Albrecht;
Pfarr, Nicole;
Weichert, Wilko;
Warth, Arne

Publication type:

journal article

Messages from the dead protect bacteria from viral attack.

Published in:

EMBO Journal, 2022, v. 41, n. 3, p. 1, doi. 10.15252/embj.2021110382

By:

Maffei, Enea;
Harms, Alexander

Publication type:

Article

Completing the BASEL phage collection to unlock hidden diversity for systematic exploration of phage–host interactions.

Published in:

PLoS Biology, 2025, v. 23, n. 4, p. 1, doi. 10.1371/journal.pbio.3003063

By:

Humolli, Dorentina;
Piel, Damien;
Maffei, Enea;
Heyer, Yannik;
Agustoni, Elia;
Shaidullina, Aisylu;
Willi, Luc;
Imwinkelried, Patrick;
Estermann, Fabienne;
Cuénod, Aline;
Buser, Dominik P.;
Alampi, Carola;
Chami, Mohamed;
Egli, Adrian;
Hiller, Sebastian;
Dunne, Matthew;
Harms, Alexander

Publication type:

Article

Adenylylation control by intra- or intermolecular active-site obstruction in Fic proteins.

Published in:

Nature, 2012, v. 482, n. 7383, p. 107, doi. 10.1038/nature10729

By:

Engel, Philipp;
Goepfert, Arnaud;
Stanger, Frédéric V.;
Harms, Alexander;
Schmidt, Alexander;
Schirmer, Tilman;
Dehio, Christoph

Publication type:

Article

Crystal Structure of the Escherichia coli Fic Toxin-Like Protein in Complex with Its Cognate Antitoxin.

Published in:

PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0163654

By:

Stanger, Frédéric V.;
Harms, Alexander;
Dehio, Christoph;
Schirmer, Tilman

Publication type:

Article

Expression of HMB45, MelanA and SOX10 is rare in non-small cell lung cancer.

Published in:

Diagnostic Pathology, 2018, v. 13, n. 1, p. N.PAG, doi. 10.1186/s13000-018-0751-7

By:

Kriegsmann, Mark;
Longuespée, Rémi;
Zgorzelski, Christiane;
Leichsenring, Jonas;
Goeppert, Benjamin;
Harms, Alexander;
Kazdal, Daniel;
Warth, Arne;
Kriegsmann, Katharina;
Muley, Thomas;
Winter, Hauke

Publication type:

Article

Differential diagnostic value of CD5 and CD117 expression in thoracic tumors: A large scale study of 1465 non-small cell lung cancer cases.

Published in:

Diagnostic Pathology, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s13000-015-0441-7

By:

Kriegsmann, Mark;
Muley, Thomas;
Harms, Alexander;
Tavernar, Luca;
Goldmann, Torsten;
Dienemann, Hendrik;
Herpel, Esther;
Warth, Arne

Publication type:

Article

Available upon all requests? How and why we should better incentivize the sharing of biomaterials.

Published in:

PLoS Biology, 2023, v. 21, n. 10, p. 1, doi. 10.1371/journal.pbio.3002360

By:

Rihn, Suzannah J.;
Harms, Alexander

Publication type:

Article

Impact of Computer-Aided CT and PET Analysis on Non-invasive T Staging in Patients with Lung Cancer and Atelectasis.

Published in:

2018

By:

Flechsig, Paul;
Rastgoo, Ramin;
Kratochwil, Clemens;
Martin, Ole;
Holland-Letz, Tim;
Harms, Alexander;
Kauczor, Hans-Ulrich;
Haberkorn, Uwe;
Giesel, Frederik L.

Publication type:

journal article

Computed tomography and histopathological findings after embolization with inherently radiopaque 40μm-microspheres, standard 40μm-microspheres and iodized oil in a porcine liver model.

Published in:

PLoS ONE, 2018, v. 13, n. 7, p. 1, doi. 10.1371/journal.pone.0198911

By:

Vollherbst, Dominik F.;
Gockner, Theresa;
Do, Thuy;
Holzer, Kerstin;
Mogler, Carolin;
Flechsig, Paul;
Harms, Alexander;
Schlett, Christopher L.;
Pereira, Philippe L.;
Richter, Götz M.;
Kauczor, Hans U.;
Sommer, Christof M.

Publication type:

Article

A bacterial toxin-antitoxin module is the origin of inter-bacterial and inter-kingdom effectors of Bartonella.

Published in:

PLoS Genetics, 2017, v. 13, n. 10, p. 1, doi. 10.1371/journal.pgen.1007077

By:

Harms, Alexander;
Liesch, Marius;
Körner, Jonas;
Québatte, Maxime;
Engel, Philipp;
Dehio, Christoph

Publication type:

Article

Birth and Resuscitation of (p)ppGpp Induced Antibiotic Tolerant Persister Cells.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-42403-7

By:

Svenningsen, Mikkel Skjoldan;
Veress, Alexandra;
Harms, Alexander;
Mitarai, Namiko;
Semsey, Szabolcs

Publication type:

Article

Influence of Copper-Sided Tin Coating on the Weldability and Formation of Friction Stir Welded Aluminum-Copper-Joints.

Published in:

Metals (2075-4701), 2019, v. 9, n. 2, p. 179, doi. 10.3390/met9020179

By:

Eslami, Nima;
Hischer, Yannik;
Harms, Alexander;
Lauterbach, Dennis;
Böhm, Stefan

Publication type:

Article

Optimization of Process Parameters for Friction Stir Welding of Aluminum and Copper Using the Taguchi Method.

Published in:

Metals (2075-4701), 2019, v. 9, n. 1, p. 63, doi. 10.3390/met9010063

By:

Eslami, Nima;
Hischer, Yannik;
Harms, Alexander;
Lauterbach, Dennis;
Böhm, Stefan

Publication type:

Article

Dissimilar Friction Stir Butt Welding of Aluminum and Copper with Cross-Section Adjustment for Current-Carrying Components.

Published in:

Metals (2075-4701), 2018, v. 8, n. 9, p. 661, doi. 10.3390/met8090661

By:

Eslami, Nima;
Harms, Alexander;
Deringer, Johann;
Fricke, Andreas;
Böhm, Stefan

Publication type:

Article

An experimental strategy for the identification of AMPylation targets from complex protein samples.

Published in:

Proteomics, 2014, v. 14, n. 9, p. 1048, doi. 10.1002/pmic.201300470

By:

Pieles, Kathrin;
Glatter, Timo;
Harms, Alexander;
Schmidt, Alexander;
Dehio, Christoph

Publication type:

Article

Cellular dissociation grading on biopsies of pulmonary squamous cell carcinoma provides prognostic information across all stages and is congruent with resection specimen grading.

Published in:

Journal of Pathology: Clinical Research, 2022, v. 8, n. 6, p. 567, doi. 10.1002/cjp2.295

By:

Jesinghaus, Moritz;
Boxberg, Melanie;
Schmitt, Maxime;
Kriegsmann, Mark;
Harms, Alexander;
Lang, Corinna;
Muley, Thomas;
Winter, Hauke;
Kriegsmann, Katharina;
Warth, Arne;
Stenzinger, Albrecht;
Denkert, Carsten;
Hoffmann, Hans;
Safi, Seyer;
Weichert, Wilko

Publication type:

Article

SLING: a tool to search for linked genes in bacterial datasets.

Published in:

Nucleic Acids Research, 2018, v. 46, n. 21, p. e128, doi. 10.1093/nar/gky738

By:

Horesh, Gal;
Harms, Alexander;
Fino, Cinzia;
Parts, Leopold;
Gerdes, Kenn;
Heinz, Eva;
Thomson, Nicholas Robert

Publication type:

Article

Myoid gonadal stromal tumor of the testis—the novel subtype of testicular gonadal stromal tumors: a case report and review of the literature.

Published in:

Journal of Medical Case Reports, 2024, v. 18, p. 1, doi. 10.1186/s13256-024-04393-7

By:

Dieckmann, Klaus-Peter;
Tharun, Lars;
Angerer, Markus;
Harms, Alexander;
Wülfing, Christian

Publication type:

Article

Impact of Different Positive End-Expiratory Pressures on Lung Mechanics in the Setting of Moderately Elevated Intra-Abdominal Pressure and Acute Lung Injury in a Porcine Model.

Published in:

Journal of Clinical Medicine, 2021, v. 10, n. 2, p. 306, doi. 10.3390/jcm10020306

By:

Fiedler, Mascha O.;
Simeliunas, Emilis;
Deutsch, B. Luise;
Diktanaite, Dovile;
Harms, Alexander;
Brune, Maik;
Dietrich, Maximilian;
Uhle, Florian;
Weigand, Markus A.;
Kalenka, Armin

Publication type:

Article

Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module.

Published in:

Microorganisms, 2021, v. 9, n. 8, p. 1645, doi. 10.3390/microorganisms9081645

By:

Schirmer, Tilman;
de Beer, Tjaart A. P.;
Tamegger, Stefanie;
Harms, Alexander;
Dietz, Nikolaus;
Dranow, David M.;
Edwards, Thomas E.;
Myler, Peter J.;
Phan, Isabelle;
Dehio, Christoph

Publication type:

Article

Variant classification in precision oncology.

Published in:

International Journal of Cancer, 2019, v. 145, n. 11, p. 2996, doi. 10.1002/ijc.32358

By:

Leichsenring, Jonas;
Horak, Peter;
Kreutzfeldt, Simon;
Heining, Christoph;
Christopoulos, Petros;
Volckmar, Anna‐Lena;
Neumann, Olaf;
Kirchner, Martina;
Ploeger, Carolin;
Budczies, Jan;
Heilig, Christoph E.;
Hutter, Barbara;
Fröhlich, Martina;
Uhrig, Sebastian;
Kazdal, Daniel;
Allgäuer, Michael;
Harms, Alexander;
Rempel, Eugen;
Lehmann, Ulrich;
Thomas, Michael

Publication type:

Article

Global DNA methylation reflects spatial heterogeneity and molecular evolution of lung adenocarcinomas.

Published in:

International Journal of Cancer, 2019, v. 144, n. 5, p. 1061, doi. 10.1002/ijc.31939

By:

Dietz, Steffen;
Lifshitz, Aviezer;
Kazdal, Daniel;
Harms, Alexander;
Endris, Volker;
Winter, Hauke;
Stenzinger, Albrecht;
Warth, Arne;
Sill, Martin;
Tanay, Amos;
Sültmann, Holger

Publication type:

Article

Spatial distribution of EGFR and KRAS mutation frequencies correlates with histological growth patterns of lung adenocarcinomas.

Published in:

International Journal of Cancer, 2017, v. 141, n. 9, p. 1841, doi. 10.1002/ijc.30881

By:

Dietz, Steffen;
Harms, Alexander;
Endris, Volker;
Eichhorn, Florian;
Kriegsmann, Mark;
Longuespée, Rémi;
Stenzinger, Albrecht;
Sültmann, Holger;
Warth, Arne;
Kazdal, Daniel

Publication type:

Article

Federated BrainAge estimation from MRI: a proof of concept.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2023, v. 19, p. 1, doi. 10.1002/alz.076747

By:

Mateus, Pedro;
Yu, Jing;
Garst, Swier J.F.;
Harms, Alexander G.J.;
Cats, Davy;
Delgado, Inigo Bermejo;
Roshchupkin, Gennady V.;
Reinders, Marcel JT;
Slagboom, Eline;
Mei, Haillang;
Bron, Esther E

Publication type:

Article

Antibiotic polymyxin arranges lipopolysaccharide into crystalline structures to solidify the bacterial membrane.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33838-0

By:

Manioglu, Selen;
Modaresi, Seyed Majed;
Ritzmann, Noah;
Thoma, Johannes;
Overall, Sarah A.;
Harms, Alexander;
Upert, Gregory;
Luther, Anatol;
Barnes, Alexander B.;
Obrecht, Daniel;
Müller, Daniel J.;
Hiller, Sebastian

Publication type:

Article

Effect of moderate elevated intra-abdominal pressure on lung mechanics and histological lung injury at different positive end-expiratory pressures.

Published in:

PLoS ONE, 2020, v. 15, n. 4, p. 1, doi. 10.1371/journal.pone.0230830

By:

Fiedler, Mascha O.;
Deutsch, B. Luise;
Simeliunas, Emilis;
Diktanaite, Dovile;
Harms, Alexander;
Brune, Maik;
Uhle, Florian;
Weigand, Markus;
Brenner, Thorsten;
Kalenka, Armin

Publication type:

Article

Systematic exploration of Escherichia coli phage–host interactions with the BASEL phage collection.

Published in:

PLoS Biology, 2021, v. 19, n. 11, p. 1, doi. 10.1371/journal.pbio.3001424

By:

Maffei, Enea;
Shaidullina, Aisylu;
Burkolter, Marco;
Heyer, Yannik;
Estermann, Fabienne;
Druelle, Valentin;
Sauer, Patrick;
Willi, Luc;
Michaelis, Sarah;
Hilbi, Hubert;
Thaler, David S.;
Harms, Alexander

Publication type:

Article

Combined Immunohistochemistry after Mass Spectrometry Imaging for Superior Spatial Information.

Published in:

Proteomics - Clinical Applications, 2019, v. 13, n. 1, p. N.PAG, doi. 10.1002/prca.201800035

By:

Kriegsmann, Katharina;
Longuespée, Rémi;
Hundemer, Michael;
Zgorzelski, Christiane;
Casadonte, Rita;
Schwamborn, Kristina;
Weichert, Wilko;
Schirmacher, Peter;
Harms, Alexander;
Kazdal, Daniel;
Leichsenring, Jonas;
Stenzinger, Albrecht;
Warth, Arne;
Fresnais, Margaux;
Kriegsmann, Jörg;
Kriegsmann, Mark

Publication type:

Article

Manipulation of host cell signaling by bacterial FIC proteins.

Published in:

FASEB Journal, 2013, v. 27, p. 554.3, doi. 10.1096/fasebj.27.1_supplement.554.3

By:

Pieles, Kathrin;
Harms, Alexander;
Dehio, Christoph

Publication type:

Article