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Autism-associated mutation in Hevin/Sparcl1 induces endoplasmic reticulum stress through structural instability.
- Published in:
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-15784-5
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- Article
Author Correction: Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases.
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- 2022
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- Correction Notice
Residue Folding Degree—Relationship to Secondary Structure Categories and Use as Collective Variable.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 23, p. 13042, doi. 10.3390/ijms222313042
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- Article
Biomolecular interactions modulate macromolecular structure and dynamics in atomistic model of a bacterial cytoplasm.
- Published in:
- eLife, 2016, p. 1, doi. 10.7554/eLife.19274
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- Article
Coulomb and CH–π interactions in (6–4) photolyase–DNA complex dominate DNA binding and repair abilities.
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- Nucleic Acids Research, 2018, v. 46, n. 13, p. 6761, doi. 10.1093/nar/gky364
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- Article
Latrunculin resistance mechanism of non‐conventional actin NAP1 uncovered by molecular dynamics simulations.
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- Cytoskeleton, 2024, v. 81, n. 2/3, p. 143, doi. 10.1002/cm.21798
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- Article
pyProGA—A PyMOL plugin for protein residue network analysis.
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- PLoS ONE, 2021, v. 16, n. 7, p. 1, doi. 10.1371/journal.pone.0255167
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- Article
Patients with lower limb‐onset ALS who have a longer duration from onset to diagnosis have a better prognosis.
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- Neurology & Clinical Neuroscience, 2022, v. 10, n. 5, p. 239, doi. 10.1111/ncn3.12652
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- Article
Quantal cumulant dynamics for real-time simulations of quantum many-body systems.
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- International Journal of Quantum Chemistry, 2015, v. 115, n. 5, p. 300, doi. 10.1002/qua.24820
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- Article
Sporadic inclusion body myositis-derived myotube culture revealed muscle cell-autonomous expression profiles.
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- PLoS ONE, 2024, v. 19, n. 8, p. 1, doi. 10.1371/journal.pone.0306021
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- Article
タンパク質の柔らかな運動を誘起する分子シミュレーション.
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- Seibutsu Butsuri, 2014, v. 54, n. 3, p. 167, doi. 10.2142/biophys.54.167
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- Article
細胞環境における水和構造とタンパク質の構造安定性.
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- Seibutsu Butsuri, 2013, v. 53, n. 4, p. 216, doi. 10.2142/biophys.53.216
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- Article
Efficient screening of protein-ligand complexes in lipid bilayers using LoCoMock score.
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- Journal of Computer-Aided Molecular Design, 2023, v. 37, n. 4, p. 217, doi. 10.1007/s10822-023-00502-8
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- Article
The binding structure and affinity of photodamaged duplex DNA with members of the photolyase/cryptochrome family: A computational study.
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- Biophysics & Physicobiology, 2018, v. 15, n. 1, p. 18, doi. 10.2142/biophysico.15.0_18
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- Article
Pathological mutations promote proteolysis of mitochondrial tRNA-specific 2-thiouridylase 1 (MTU1) via mitochondrial caseinolytic peptidase (CLPP).
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- Nucleic Acids Research, 2024, v. 52, n. 3, p. 1341, doi. 10.1093/nar/gkad1197
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- Article
Ligand Binding Path Sampling Based on Parallel Cascade Selection Molecular Dynamics: LB-PaCS-MD.
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- Materials (1996-1944), 2022, v. 15, n. 4, p. 1490, doi. 10.3390/ma15041490
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- Article
The role of ATP in solubilizing RNA‐binding protein fused in sarcoma.
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- Proteins, 2022, v. 90, n. 8, p. 1606, doi. 10.1002/prot.26335
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- Article
Phosphorylation in the accessory domain of yeast histone chaperone protein 1 exposes the nuclear export signal sequence.
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- Proteins, 2022, v. 90, n. 2, p. 317, doi. 10.1002/prot.26240
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- Article
Temperature–pressure shuffling outlier flooding method enhances the conformational sampling of proteins.
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- Journal of Computational Chemistry, 2019, v. 40, n. 15, p. 1530, doi. 10.1002/jcc.25806
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- Article
Temperature-shuffled parallel cascade selection molecular dynamics accelerates the structural transitions of proteins.
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- Journal of Computational Chemistry, 2017, v. 38, n. 31, p. 2671, doi. 10.1002/jcc.25060
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- Article
Structural dissimilarity sampling with dynamically self-guiding selection.
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- Journal of Computational Chemistry, 2017, v. 38, n. 22, p. 1921, doi. 10.1002/jcc.24837
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- Article
Common folding processes of mini-proteins: Partial formations of secondary structures initiate the immediate protein folding.
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- Journal of Computational Chemistry, 2017, v. 38, n. 11, p. 790, doi. 10.1002/jcc.24748
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- Article
Sparsity-weighted outlier FLOODing ( OFLOOD) method: Efficient rare event sampling method using sparsity of distribution.
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- Journal of Computational Chemistry, 2016, v. 37, n. 8, p. 724, doi. 10.1002/jcc.24255
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- Article
Enhanced conformational sampling method for proteins based on the Ta Boo Se Arch algorithm: Application to the folding of a mini-protein, chignolin.
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- Journal of Computational Chemistry, 2015, v. 36, n. 10, p. 763, doi. 10.1002/jcc.23854
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- Article
Protein folding pathways extracted by OFLOOD: Outlier FLOODing method.
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- Journal of Computational Chemistry, 2015, v. 36, n. 2, p. 97, doi. 10.1002/jcc.23773
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- Article
On the induced-fit mechanism of substrate-enzyme binding structures of nylon-oligomer hydrolase.
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- Journal of Computational Chemistry, 2014, v. 35, n. 16, p. 1240, doi. 10.1002/jcc.23614
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- Article