Works by Gut, Ivo
Results: 126
From Wet-Lab to Variations: Concordance and Speed of Bioinformatics Pipelines for Whole Genome and Whole Exome Sequencing.
- Published in:
- Human Mutation, 2016, v. 37, n. 12, p. 1263, doi. 10.1002/humu.23114
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- Publication type:
- Article
Whole genomes of Amazonian uakari monkeys reveal complex connectivity and fast differentiation driven by high environmental dynamism.
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- Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06901-3
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- Publication type:
- Article
Novel Breast Cancer Susceptibility Locus at 9q31.2: Results of a Genome-Wide Association Study.
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- JNCI: Journal of the National Cancer Institute, 2011, v. 103, n. 5, p. 425, doi. 10.1093/jnci/djq563
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- Article
Multi-organ single-cell transcriptomics of immune cells uncovered organ-specific gene expression and functions.
- Published in:
- Scientific Data, 2024, v. 11, n. 1, p. 1, doi. 10.1038/s41597-024-03152-z
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- Publication type:
- Article
Site-specific methylation and acetylation of lysine residues in the C-terminal domain (CTD) of RNA polymerase II.
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- Transcription (2154-1264), 2015, v. 6, n. 5, p. 91, doi. 10.1080/21541264.2015.1114983
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- Publication type:
- Article
Single-cell transcriptome conservation in cryopreserved cells and tissues.
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- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1171-9
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- Publication type:
- Article
Recessive variants of MuSK are associated with late onset CMS and predominant limb girdle weakness.
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- American Journal of Medical Genetics. Part A, 2018, v. 176, n. 7, p. 1594, doi. 10.1002/ajmg.a.38707
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- Article
Whole genome sequencing of turbot (Scophthalmus maximus; Pleuronectiformes): a fish adapted to demersal life.
- Published in:
- DNA Research, 2016, v. 23, n. 3, p. 181, doi. 10.1093/dnares/dsw007
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- Publication type:
- Article
A revisit of high collision energy effects on collision-induced dissociation spectra using matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometry (MALDI-LIFT-TOF/TOF): application to the sequencing of RNA/DNA chimeras.
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- Rapid Communications in Mass Spectrometry: RCM, 2014, v. 28, n. 13, p. 1433, doi. 10.1002/rcm.6913
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- Article
Structural studies of the sBBI/trypsin non-covalent complex using covalent modification and mass spectrometry.
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- Rapid Communications in Mass Spectrometry: RCM, 2014, v. 28, n. 5, p. 413, doi. 10.1002/rcm.6797
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- Article
Possible conformational change within the desolvated and cationized.
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- Rapid Communications in Mass Spectrometry: RCM, 2011, v. 25, n. 12, p. 1725, doi. 10.1002/rcm.5039
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- Publication type:
- Article
Recommendations for the design and analysis of epigenome-wide association studies.
- Published in:
- Nature Methods, 2013, v. 10, n. 10, p. 949, doi. 10.1038/nmeth.2632
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- Publication type:
- Article
Seventh international meeting on single nucleotide polymorphism and complex genome analysis: ‘ever bigger scans and an increasingly variable genome’.
- Published in:
- Human Genetics, 2006, v. 119, n. 4, p. 451, doi. 10.1007/s00439-006-0151-z
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- Publication type:
- Article
Pheno-seq – linking visual features and gene expression in 3D cell culture systems.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-48771-4
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- Publication type:
- Article
Systems Genetics of Hepatic Metabolome Reveals Octopamine as a Target for Non-Alcoholic Fatty Liver Disease Treatment.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-40153-0
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- Publication type:
- Article
Genomic and Phenotypic Variation in Morphogenetic Networks of Two Candida albicans Isolates Subtends Their Different Pathogenic Potential.
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- Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2017.01997
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- Publication type:
- Article
A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797).
- Published in:
- G3: Genes | Genomes | Genetics, 2023, v. 13, n. 12, p. 1, doi. 10.1093/g3journal/jkad220
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- Publication type:
- Article
The Genome Sequence of the Eastern Woodchuck (Marmota monax) - A Preclinical Animal Model for Chronic Hepatitis B.
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- G3: Genes | Genomes | Genetics, 2019, v. 9, n. 12, p. 3943, doi. 10.1534/g3.119.400413
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- Publication type:
- Article
Multiplex target protein imaging in tissue sections by mass spectrometry - TAMSIM.
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- Rapid Communications in Mass Spectrometry: RCM, 2007, v. 21, n. 6, p. 823, doi. 10.1002/rcm.2895
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- Publication type:
- Article
Extension of the GOOD assay for genotyping single nucleotide polymorphisms by matrix-assisted laser desorption/ionization mass spectrometry.
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- Rapid Communications in Mass Spectrometry: RCM, 2003, v. 17, n. 12, p. 1265, doi. 10.1002/rcm.1050
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- Publication type:
- Article
Analysis of negatively 'charge tagged' DNA by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.
- Published in:
- Rapid Communications in Mass Spectrometry: RCM, 1999, v. 13, n. 17, p. 1739, doi. 10.1002/(SICI)1097-0231(19990915)13:17<1739::AID-RCM708>3.0.CO;2-7
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- Publication type:
- Article
Analysis of DNA by 'Charge Tagging' and Matrix-assisted Laser Desorption/Ionization Mass Spectrometry.
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- Rapid Communications in Mass Spectrometry: RCM, 1997, v. 11, n. 1, p. 43, doi. 10.1002/(SICI)1097-0231(19970115)11:1<43::AID-RCM817>3.0.CO;2-H
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- Publication type:
- Article
High-Specificity Single-Tube Multiplex Genotyping Using Ribo- PAP PCR, Tag Primers, Alkali Cleavage of RNA/ DNA Chimeras and MALDI- TOF MS.
- Published in:
- Human Mutation, 2013, v. 34, n. 1, p. 266, doi. 10.1002/humu.22227
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- Publication type:
- Article
High-Density SNP genotyping defines 17 distinct haplotypes of the TNF block in the Caucasian population: Implications for haplotype tagging.
- Published in:
- Human Mutation, 2004, v. 24, n. 6, p. 517, doi. 10.1002/humu.20100
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- Publication type:
- Article
DNA analysis by MALDI-TOF mass spectrometry.
- Published in:
- Human Mutation, 2004, v. 23, n. 5, p. 437, doi. 10.1002/humu.20023
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- Publication type:
- Article
Automation in genotyping of single nucleotide polymorphisms.
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- Human Mutation, 2001, v. 17, n. 6, p. 475, doi. 10.1002/humu.1131
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- Publication type:
- Article
gemBS: high throughput processing for DNA methylation data from bisulfite sequencing.
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- Bioinformatics, 2019, v. 35, n. 5, p. 737, doi. 10.1093/bioinformatics/bty690
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- Publication type:
- Article
Examining Phylogenetic Relationships Among Gibbon Genera Using Whole Genome Sequence Data Using an Approximate Bayesian Computation Approach.
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- Genetics, 2015, v. 200, n. 1, p. 295, doi. 10.1534/genetics.115.174425
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- Publication type:
- Article
Modulation of imprinted gene network in placenta results in normal development of in vitro manipulated mouse embryos.
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- Human Molecular Genetics, 2010, v. 19, n. 9, p. 1779, doi. 10.1093/hmg/ddq059
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- Publication type:
- Article
Utilization of the three high-throughput SNP genotyping methods, the GOOD assay, Amplifluor and TaqMan, in diploid and polyploid plants.
- Published in:
- Theoretical & Applied Genetics, 2006, v. 112, n. 6, p. 1115, doi. 10.1007/s00122-006-0213-6
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- Publication type:
- Article
Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation.
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- EMBO Journal, 2012, v. 31, n. 12, p. 2784, doi. 10.1038/emboj.2012.123
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- Publication type:
- Article
G/T Substitution in Intron 1 of the UNC13B Gene Is Associated With Increased Risk of Nephropathy in Patients With Type 1 Diabetes.
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- Diabetes, 2008, v. 57, n. 10, p. 2843, doi. 10.2337/db08-0073
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- Publication type:
- Article
Analysis of 14 Candidate Genes for Diabetic Nephropathy on Chromosome 3q in European Populations.
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- Diabetes, 2006, v. 55, n. 11, p. 3166, doi. 10.2337/db06-0271
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- Publication type:
- Article
Runs of homozygosity reveal signatures of positive selection for reproduction traits in breed and non-breed horses.
- Published in:
- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1977-3
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- Article
Genomic characterization of mutant laboratory mouse strains by exome sequencing and annotation lift-over.
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- 2015
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- Bibliography
Involvement of a citrus meiotic recombination TTC-repeat motif in the formation of gross deletions generated by ionizing radiation and MULE activation.
- Published in:
- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1280-3
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- Publication type:
- Article
Relationship between genome and epigenome - challenges and requirements for future research.
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- BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-487
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- Article
Divergent transcription is associated with promoters of transcriptional regulators.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-914
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- Article
A mechanistic basis for amplification differences between samples and between genome regions.
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- BMC Genomics, 2012, v. 13, n. 1, p. 455, doi. 10.1186/1471-2164-13-455
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- Publication type:
- Article
Pheno-Ranker: a toolkit for comparison of phenotypic data stored in GA4GH standards and beyond.
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- BMC Bioinformatics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12859-024-05993-2
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- Publication type:
- Article
Recurrent somatic mutations reveal new insights into consequences of mutagenic processes in cancer.
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- PLoS Computational Biology, 2019, v. 15, n. 11, p. 1, doi. 10.1371/journal.pcbi.1007496
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- Publication type:
- Article
Evolution of Robustness to Protein Mistranslation by Accelerated Protein Turnover.
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- PLoS Biology, 2015, v. 13, n. 10, p. 1, doi. 10.1371/journal.pbio.1002291
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- Publication type:
- Article
DNA Methylation Profiling of the Human Major Histocompatibility Complex: A Pilot Study for the Human Epigenome Project.
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- PLoS Biology, 2004, v. 2, n. 12, p. 2170, doi. 10.1371/journal.pbio.0020405
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- Publication type:
- Article
DNA Methylation Profiling of the Human Major Histocompatibility Complex: A Pilot Study for the Human Epigenome Project.
- Published in:
- PLoS Biology, 2004, v. 2, n. 11, p. 1, doi. 10.1371/journal.pbio.0020405
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- Publication type:
- Article
Improvements of TArgeted multiplex mass spectrometry IMaging.
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- Proteomics, 2008, v. 8, n. 18, p. 3725, doi. 10.1002/pmic.200701150
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- Publication type:
- Article
Machine learning and multi-omics data in chronic lymphocytic leukemia: the future of precision medicine?
- Published in:
- Frontiers in Genetics, 2024, p. 1, doi. 10.3389/fgene.2023.1304661
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- Publication type:
- Article
Information recovery from low coverage whole-genome bisulfite sequencing.
- Published in:
- Nature Communications, 2016, v. 7, n. 6, p. 11306, doi. 10.1038/ncomms11306
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- Publication type:
- Article
Site- and allele-specific polycomb dysregulation in T-cell leukaemia.
- Published in:
- Nature Communications, 2015, v. 6, n. 1, p. 6094, doi. 10.1038/ncomms7094
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- Publication type:
- Article
Mitochondrial Complex I Is a Global Regulator of Secondary Metabolism, Virulence and Azole Sensitivity in Fungi.
- Published in:
- PLoS ONE, 2016, v. 11, n. 7, p. 1, doi. 10.1371/journal.pone.0158724
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- Article
Correction: Colorectal Adenomas Contain Multiple Somatic Mutations That Do Not Coincide with Synchronous Adenocarcinoma Specimens.
- Published in:
- PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0125459
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- Article