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Avicularin Attenuated Lead-Induced Ferroptosis, Neuroinflammation, and Memory Impairment in Mice.
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- Antioxidants, 2024, v. 13, n. 8, p. 1024, doi. 10.3390/antiox13081024
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- Article
Improved prediction of DNA and RNA binding proteins with deep learning models.
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- Briefings in Bioinformatics, 2024, v. 25, n. 4, p. 1, doi. 10.1093/bib/bbae285
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- Article
Lead-induced liver fibrosis and inflammation in mice by the AMPK/MAPKs/NF-κB and STAT3/TGF-β1/Smad2/3 pathways: the role of Isochlorogenic acid a.
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- Toxicology Research, 2024, v. 13, n. 3, p. 1, doi. 10.1093/toxres/tfae072
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- Article
Molecular evolution of Zika virus as it crossed the Pacific to the Americas.
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- Cladistics, 2017, v. 33, n. 1, p. 1, doi. 10.1111/cla.12178
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Single-Stranded DNA Binding Proteins and Their Identification Using Machine Learning-Based Approaches.
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- Biomolecules (2218-273X), 2022, v. 12, n. 9, p. 1187, doi. 10.3390/biom12091187
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- Article
Comparative assessments of indel annotations in healthy and cancer genomes with next-generation sequencing data.
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- BMC Medical Genomics, 2020, v. 13, n. 1, p. N.PAG, doi. 10.1186/s12920-020-00818-6
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- Article
ComparePD: Improving protein–DNA complex model comparison with hydrogen bond energy‐based metrics.
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- Proteins, 2023, v. 91, n. 8, p. 1077, doi. 10.1002/prot.26493
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Insights into protein–DNA interactions from hydrogen bond energy‐based comparative protein–ligand analyses.
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- Proteins, 2022, v. 90, n. 6, p. 1303, doi. 10.1002/prot.26313
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Statistical analysis of structural determinants for protein-DNA-binding specificity.
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- Proteins, 2016, v. 84, n. 8, p. 1147, doi. 10.1002/prot.25061
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- Article
Structure-based prediction of transcription factor binding sites using a protein-DNA docking approach.
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- Proteins, 2008, v. 72, n. 4, p. 1114, doi. 10.1002/prot.22002
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Analysis of chameleon sequences and their implications in biological processes.
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- Proteins, 2007, v. 67, n. 3, p. 548, doi. 10.1002/prot.21285
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Molecular modeling of the core of Aβ amyloid fibrils.
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- Proteins, 2004, v. 57, n. 2, p. 357, doi. 10.1002/prot.20222
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- Article
An SVM-based method for assessment of transcription factor-DNA complex models.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 49, doi. 10.1186/s12859-018-2538-y
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- Article
New insights into protein–DNA binding specificity from hydrogen bond based comparative study.
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- Nucleic Acids Research, 2019, v. 47, n. 21, p. 11103, doi. 10.1093/nar/gkz963
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- Article
Direct activation of human and mouse Oct4 genes using engineered TALE and Cas9 transcription factors.
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- Nucleic Acids Research, 2014, v. 42, n. 7, p. 4375, doi. 10.1093/nar/gku109
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- Article
A knowledge-based orientation potential for transcription factor-DNA docking.
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- Bioinformatics, 2013, v. 29, n. 3, p. 322, doi. 10.1093/bioinformatics/bts699
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- Article
Highly Enantioselective Synthesis of ( R)-3-Alkyl-3-hydroxyindolin-2-ones Including Natural Product ( R)-Convolutamydine A Catalyzed by A Primary Amine.
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- Asian Journal of Organic Chemistry, 2017, v. 6, n. 5, p. 605, doi. 10.1002/ajoc.201700019
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- Article
Solvent-Controlled Enzyme-Catalyzed Friedel-Crafts Reactions of Indoles and Isatins by Using α-Chymotrypsin.
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- Asian Journal of Organic Chemistry, 2017, v. 6, n. 3, p. 297, doi. 10.1002/ajoc.201600526
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- Article
Quantitative evaluation of protein–DNA interactions using an optimized knowledge-based potential.
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- Nucleic Acids Research, 2005, v. 33, n. 2, p. 546, doi. 10.1093/nar/gki204
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- Article
PROSPECT-PSPP: an automatic computational pipeline for protein structure prediction.
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- Nucleic Acids Research, 2004, v. 32, n. suppl 2, p. w522, doi. 10.1093/nar/gkh414
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Protein structure prediction using sparse dipolar coupling data.
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- Nucleic Acids Research, 2004, v. 32, n. 2, p. 551
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- Article
Improving the performance of DomainParser for structural domain partition using neural network.
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- Nucleic Acids Research, 2003, v. 31, n. 3, p. 944, doi. 10.1093/nar/gkg189
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Structural and functional analysis of somatic coding and UTR indels in breast and lung cancer genomes.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-00583-1
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