Works by Gugger, Paul F.

Results: 40

Whole-transcriptome response to water stress in a California endemic oak, Quercus lobata.

Published in:

Tree Physiology, 2017, v. 37, n. 5, p. 632, doi. 10.1093/treephys/tpw122

By:

Gugger, Paul F.;
Peñaloza-Ramírez, Juan Manuel;
Wright, Jessica W.;
Sork, Victoria L.

Publication type:

Article

Cover.

Published in:

2019

By:

Zhao, Jian‐Li;
Werth, Silke;
Ikegami, Makihiko;
Gugger, Paul F.;
Sork, Victoria L.

Publication type:

Cover Art

Historical interactions are predicted to be disrupted under future climate change: The case of lace lichen and valley oak.

Published in:

Journal of Biogeography, 2019, v. 46, n. 1, p. 19, doi. 10.1111/jbi.13442

By:

Zhao, Jian‐Li;
Gugger, Paul F.;
Sork, Victoria L.;
Werth, Silke;
Ikegami, Makihiko

Publication type:

Article

Ecological divergence of two closely related Roscoea species associated with late Quaternary climate change.

Published in:

Journal of Biogeography, 2016, v. 43, n. 10, p. 1990, doi. 10.1111/jbi.12809

By:

Zhao, Jian‐Li;
Gugger, Paul F.;
Xia, Yong‐Mei;
Li, Qing‐Jun

Publication type:

Article

Climatically stable landscapes predict patterns of genetic structure and admixture in the Californian canyon live oak.

Published in:

Journal of Biogeography, 2015, v. 42, n. 2, p. 328, doi. 10.1111/jbi.12419

By:

Ortego, Joaquín;
Gugger, Paul F.;
Sork, Victoria L.;
Riddle, Brett

Publication type:

Article

Influence of climatic niche suitability and geographical overlap on hybridization patterns among southern Californian oaks.

Published in:

Journal of Biogeography, 2014, v. 41, n. 10, p. 1895, doi. 10.1111/jbi.12334

By:

Ortego, Joaquín;
Gugger, Paul F.;
Riordan, Erin C.;
Sork, Victoria L.;
Emerson, Brent

Publication type:

Article

Molecular and morphological support for a Florida origin of the Cuban oak.

Published in:

Journal of Biogeography, 2013, v. 40, n. 4, p. 632, doi. 10.1111/j.1365-2699.2011.02610.x

By:

Gugger, Paul F.;
Cavender‐Bares, Jeannine

Publication type:

Article

Inferring long-distance dispersal and topographic barriers during post-glacial colonization from the genetic structure of red maple ( Acer rubrum L.) in New England.

Published in:

Journal of Biogeography, 2008, v. 35, n. 9, p. 1665, doi. 10.1111/j.1365-2699.2008.01915.x

By:

Gugger, Paul F.;
McLachlan, Jason S.;
Manos, Paul S.;
Clark, James S.

Publication type:

Article

Association of genetic and phenotypic variability with geography and climate in three southern California oaks.

Published in:

American Journal of Botany, 2016, v. 103, n. 1, p. 73, doi. 10.3732/ajb.1500135

By:

Riordan, Erin C.;
Gugger, Paul F.;
Ortego, Joaquín;
Smith, Carrie;
Gaddis, Keith;
Thompson, Pam;
Sork, Victoria L.

Publication type:

Article

Landscape genomic analysis of candidate genes for climate adaptation in a California endemic oak, Quercus lobata.

Published in:

American Journal of Botany, 2016, v. 103, n. 1, p. 33, doi. 10.3732/ajb.1500162

By:

Sork, Victoria L.;
Squire, Kevin;
Gugger, Paul F.;
Steele, Stephanie E.;
Levy, Eric D.;
Eckert, Andrew J.

Publication type:

Article

Microglia RAGE exacerbates the progression of neurodegeneration within the SOD1<sup>G93A</sup> murine model of amyotrophic lateral sclerosis in a sex-dependent manner.

Published in:

2021

By:

MacLean, Michael;
Juranek, Judyta;
Cuddapah, Swetha;
López-Díez, Raquel;
Ruiz, Henry H.;
Hu, Jiyuan;
Frye, Laura;
Li, Huilin;
Gugger, Paul F.;
Schmidt, Ann Marie

Publication type:

journal article

Evolutionary insights from de novo transcriptome assembly and SNP discovery in California white oaks.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1761-4

By:

Cokus, Shawn J.;
Gugger, Paul F.;
Sork, Victoria L.

Publication type:

Article

Evolutionary insights from de novo transcriptome assembly and SNP discovery in California white oaks.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 552, doi. 10.1186/s12864-015-1761-4

By:

Cokus, Shawn J.;
Gugger, Paul F.;
Sork, Victoria L.

Publication type:

Article

GENOMIC IDENTITY OF WHITE OAK SPECIES IN AN EASTERN NORTH AMERICAN SYNGAMEON.

Published in:

Annals of the Missouri Botanical Garden, 2019, v. 104, n. 3, p. 455, doi. 10.3417/2019434

By:

Hipp, Andrew L.;
Whittemore, Alan T.;
Garner, Mira;
Hahn, Marlene;
Fitzek, Elisabeth;
Guichoux, Erwan;
Cavender-Bares, Jeannine;
Gugger, Paul F.;
Manos, Paul S.;
Pearse, Ian S.;
Cannon, Charles H.

Publication type:

Article

Low genetic differentiation between two morphologically and ecologically distinct giant-leaved Mexican oaks.

Published in:

Plant Systematics & Evolution, 2019, v. 305, n. 1, p. 89, doi. 10.1007/s00606-018-1554-8

By:

Albarrán-Lara, Ana L.;
Petit, Remy J.;
Kremer, Antoine;
Caron, Henry;
Peñaloza-Ramírez, Juan M.;
Gugger, Paul F.;
Dávila-Aranda, Patricia D.;
Oyama, Ken

Publication type:

Article

Distinct Expression and Methylation Patterns for Genes with Different Fates following a Single Whole-Genome Duplication in Flowering Plants.

Published in:

Molecular Biology & Evolution, 2020, v. 37, n. 8, p. 2394, doi. 10.1093/molbev/msaa105

By:

Shi, Tao;
Rahmani, Razgar Seyed;
Gugger, Paul F;
Wang, Muhua;
Li, Hui;
Zhang, Yue;
Li, Zhizhong;
Wang, Qingfeng;
Peer, Yves Van de;
Marchal, Kathleen;
Chen, Jinming

Publication type:

Article

Carcass age and searcher identity affect morphological assessment of sex of bats.

Published in:

Journal of Wildlife Management, 2018, v. 82, n. 8, p. 1582, doi. 10.1002/jwmg.21544

By:

Nelson, David M.;
Nagel, Juliet;
Trott, Regina;
Campbell, Caitlin J.;
Pruitt, Lori;
Good, Rhett E.;
Iskali, Goniela;
Gugger, Paul F.

Publication type:

Article

Landscape genomics of Quercus lobata reveals genes involved in local climate adaptation at multiple spatial scales.

Published in:

Molecular Ecology, 2021, v. 30, n. 2, p. 406, doi. 10.1111/mec.15731

By:

Gugger, Paul F.;
Fitz‐Gibbon, Sorel T.;
Albarrán‐Lara, Ana;
Wright, Jessica W.;
Sork, Victoria L.

Publication type:

Article

RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercus sect. Quercus: Fagaceae).

Published in:

Molecular Ecology, 2018, v. 27, n. 22, p. 4556, doi. 10.1111/mec.14869

By:

Kim, Bernard Y.;
Wei, Xinzeng;
Fitz‐Gibbon, Sorel;
Lohmueller, Kirk E.;
Ortego, Joaquín;
Gugger, Paul F.;
Sork, Victoria L.

Publication type:

Article

Species-wide patterns of DNA methylation variation in Quercus lobata and their association with climate gradients.

Published in:

Molecular Ecology, 2016, v. 25, n. 8, p. 1665, doi. 10.1111/mec.13563

By:

Gugger, Paul F.;
Fitz‐Gibbon, Sorel;
PellEgrini, Matteo;
Sork, Victoria L.

Publication type:

Article

Evolutionary and demographic history of the Californian scrub white oak species complex: an integrative approach.

Published in:

Molecular Ecology, 2015, v. 24, n. 24, p. 6188, doi. 10.1111/mec.13457

By:

Ortego, Joaquín;
Noguerales, Víctor;
Gugger, Paul F.;
Sork, Victoria L.

Publication type:

Article

Genome-wide signature of local adaptation linked to variable Cp G methylation in oak populations.

Published in:

Molecular Ecology, 2015, v. 24, n. 15, p. 3823, doi. 10.1111/mec.13230

By:

Platt, Alexander;
Gugger, Paul F.;
Pellegrini, Matteo;
Sork, Victoria L.

Publication type:

Article

Influence of late Quaternary climate change on present patterns of genetic variation in valley oak, Quercus lobata Née.

Published in:

Molecular Ecology, 2013, v. 22, n. 13, p. 3598, doi. 10.1111/mec.12317

By:

Gugger, Paul F.;
Ikegami, Makihiko;
Sork, Victoria L.

Publication type:

Article

Influence of environmental heterogeneity on genetic diversity and structure in an endemic southern Californian oak.

Published in:

Molecular Ecology, 2012, v. 21, n. 13, p. 3210, doi. 10.1111/j.1365-294X.2012.05591.x

By:

ORTEGO, JOAQUÍN;
RIORDAN, ERIN C.;
GUGGER, PAUL F.;
SORK, VICTORIA L.

Publication type:

Article

Assessment of shared alleles in drought-associated candidate genes among southern California white oak species (Quercus sect. Quercus).

Published in:

BMC Genetics, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12863-018-0677-9

By:

Oney-Birol, Signem;
Fitz-Gibbon, Sorel;
Chen, Jin-Ming;
Gugger, Paul F.;
Sork, Victoria L.

Publication type:

Article

Aldose reductase promotes diet-induced obesity via induction of senescence in subcutaneous adipose tissue.

Published in:

2022

By:

Thiagarajan, Devi;
Quadri, Nosirudeen;
Jawahar, Shabnam;
Zirpoli, Hylde;
del Pozo, Carmen Hurtado;
López‐Díez, Raquel;
Hasan, Syed Nurul;
Yepuri, Gautham;
Gugger, Paul F.;
Finlin, Brian S.;
Kern, Philip A.;
Gabbay, Kenneth;
Schmidt, Ann Marie;
Ramasamy, Ravichandran;
López-Díez, Raquel

Publication type:

journal article

DIAPH1 mediates progression of atherosclerosis and regulates hepatic lipid metabolism in mice.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-04643-2

By:

Senatus, Laura;
Egaña-Gorroño, Lander;
López-Díez, Raquel;
Bergaya, Sonia;
Aranda, Juan Francisco;
Amengual, Jaume;
Arivazhagan, Lakshmi;
Manigrasso, Michaele B.;
Yepuri, Gautham;
Nimma, Ramesh;
Mangar, Kaamashri N.;
Bernadin, Rollanda;
Zhou, Boyan;
Gugger, Paul F.;
Li, Huilin;
Friedman, Richard A.;
Theise, Neil D.;
Shekhtman, Alexander;
Fisher, Edward A.;
Ramasamy, Ravichandran

Publication type:

Article

First Draft Assembly and Annotation of the Genome of a California Endemic Oak Quercus lobata Née (Fagaceae).

Published in:

G3: Genes | Genomes | Genetics, 2016, v. 6, n. 11, p. 3485, doi. 10.1534/g3.116.030411

By:

Sork, Victoria L.;
Fitz-Gibbon, Sorel T.;
Puiu, Daniela;
Crepeau, Marc;
Gugger, Paul F.;
Sherman, Rachel;
Stevens, Kristian;
Langley, Charles H.;
Pellegrini, Matteo;
Salzberg, Steven L.

Publication type:

Article

Landscape genomics provides evidence of climate‐associated genetic variation in Mexican populations of Quercus rugosa.

Published in:

Evolutionary Applications, 2018, v. 11, n. 10, p. 1842, doi. 10.1111/eva.12684

By:

Martins, Karina;
Gugger, Paul F.;
Llanderal‐Mendoza, Jesus;
González‐Rodríguez, Antonio;
Fitz‐Gibbon, Sorel T.;
Zhao, Jian‐Li;
Rodríguez‐Correa, Hernando;
Oyama, Ken;
Sork, Victoria L.

Publication type:

Article

Applying landscape genomic tools to forest management and restoration of Hawaiian koa (<italic>Acacia koa</italic>) in a changing environment.

Published in:

Evolutionary Applications, 2018, v. 11, n. 2, p. 231, doi. 10.1111/eva.12534

By:

Gugger, Paul F.;
Liang, Christina T.;
Sork, Victoria L.;
Hodgskiss, Paul;
Wright, Jessica W.

Publication type:

Article

Responses of an endemic species (Roscoea humeana) in the Hengduan Mountains to climate change.

Published in:

Diversity & Distributions, 2021, v. 27, n. 11, p. 2231, doi. 10.1111/ddi.13397

By:

Chu, Xue;
Gugger, Paul F.;
Li, Li;
Zhao, Jian‐Li;
Li, Qing‐Jun;
Sun, Jian

Publication type:

Article

Investigating the molecular basis for heterophylly in the aquatic plant Potamogeton octandrus (Potamogetonaceae) with comparative transcriptomics.

Published in:

PeerJ, 2018, p. 1, doi. 10.7717/peerj.4448

By:

Dingxuan He;
Pin Guo;
Gugger, Paul F.;
Youhao Guo;
Xing Liu;
Jinming Chen

Publication type:

Article

Dendroecology meets genomics in the common garden: new insights into climate adaptation.

Published in:

New Phytologist, 2018, v. 218, n. 2, p. 401, doi. 10.1111/nph.15094

By:

Evans, Margaret E. K.;
Gugger, Paul F.;
Lynch, Ann M.;
Guiterman, Christopher H.;
Fowler, Joshua C.;
Klesse, Stefan;
Riordan, Erin C.

Publication type:

Article

Genomic data reveal cryptic lineage diversification and introgression in Californian golden cup oaks (section <italic>Protobalanus</italic>).

Published in:

New Phytologist, 2018, v. 218, n. 2, p. 804, doi. 10.1111/nph.14951

By:

Ortego, Joaquín;
Gugger, Paul F.;
Sork, Victoria L.

Publication type:

Article

Impacts of human-induced environmental disturbances on hybridization between two ecologically differentiated Californian oak species.

Published in:

New Phytologist, 2017, v. 213, n. 2, p. 942, doi. 10.1111/nph.14182

By:

Ortego, Joaquín;
Gugger, Paul F.;
Sork, Victoria L.

Publication type:

Article

Climate refugia: joint inference from fossil records, species distribution models and phylogeography.

Published in:

New Phytologist, 2014, v. 204, n. 1, p. 37, doi. 10.1111/nph.12929

By:

Gavin, Daniel G.;
Fitzpatrick, Matthew C.;
Gugger, Paul F.;
Heath, Katy D.;
Rodríguez‐Sánchez, Francisco;
Dobrowski, Solomon Z.;
Hampe, Arndt;
Hu, Feng Sheng;
Ashcroft, Michael B.;
Bartlein, Patrick J.;
Blois, Jessica L.;
Carstens, Bryan C.;
Davis, Edward B.;
Lafontaine, Guillaume;
Edwards, Mary E.;
Fernandez, Matias;
Henne, Paul D.;
Herring, Erin M.;
Holden, Zachary A.;
Kong, Woo‐seok

Publication type:

Article

Southward Pleistocene migration of Douglas-fir into Mexico: phylogeography, ecological niche modeling, and conservation of 'rear edge' populations.

Published in:

New Phytologist, 2011, v. 189, n. 4, p. 1185, doi. 10.1111/j.1469-8137.2010.03559.x

By:

Gugger, Paul F.;
González-Rodríguez, Antonio;
Rodríguez-Correa, Hernando;
Sugita, Shinya;
Cavender-Bares, Jeannine

Publication type:

Article

Neuronal–glial communication perturbations in murine SOD1<sup>G93A</sup> spinal cord.

Published in:

Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03128-y

By:

MacLean, Michael;
López-Díez, Raquel;
Vasquez, Carolina;
Gugger, Paul F.;
Schmidt, Ann Marie

Publication type:

Article

Phylogeography of Douglas-fir based on mitochondrial and chloroplast DNA sequences: testing hypotheses from the fossil record.

Published in:

Molecular Ecology, 2010, v. 19, n. 9, p. 1877, doi. 10.1111/j.1365-294X.2010.04622.x

By:

Gugger, Paul F.;
Sugita, Shinya;
Cavender-Bares, Jeannine

Publication type:

Article

High-quality genome and methylomes illustrate features underlying evolutionary success of oaks.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29584-y

By:

Sork, Victoria L.;
Cokus, Shawn J.;
Fitz-Gibbon, Sorel T.;
Zimin, Aleksey V.;
Puiu, Daniela;
Garcia, Jesse A.;
Gugger, Paul F.;
Henriquez, Claudia L.;
Zhen, Ying;
Lohmueller, Kirk E.;
Pellegrini, Matteo;
Salzberg, Steven L.

Publication type:

Article