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Unfavorable Individuals in Social Gaming Networks.
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- Scientific Reports, 2015, p. 17481, doi. 10.1038/srep17481
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- Article
Local Nash Equilibrium in Social Networks.
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- Scientific Reports, 2014, p. 1, doi. 10.1038/srep06224
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- Article
Selecting high-quality negative samples for effectively predicting protein-RNA interactions.
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- BMC Systems Biology, 2017, v. 11, p. 1, doi. 10.1186/s12918-017-0390-8
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- Article
Screening lifespan-extending drugs in Caenorhabditis elegans via label propagation on drug-protein networks.
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- BMC Systems Biology, 2016, v. 10, p. 509, doi. 10.1186/s12918-016-0362-4
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- Article
A semi-supervised boosting SVM for predicting hot spots at protein-protein Interfaces.
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- BMC Systems Biology, 2012, v. 6, n. Suppl 2, p. 1, doi. 10.1186/1752-0509-6-S2-S6
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- Article
Similarity evaluation of DNA sequences based on frequent patterns and entropy.
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- BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/1471-2164-16-S3-S5
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- Article
Histone modifications involved in cassette exon inclusions: a quantitative and interpretable analysis.
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- BMC Genomics, 2014, v. 15, n. 1, p. 601, doi. 10.1186/1471-2164-15-1148
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- Article
Automatically clustering large-scale miRNA sequences: methods and experiments.
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- BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S15
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- Article
Genome-wide search for miRNA-target interactions in Arabidopsis thaliana with an integrated approach.
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- BMC Genomics, 2012, v. 13, n. Suppl 3, p. 1, doi. 10.1186/1471-2164-13-S3-S3
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- Article
Protein–protein interaction prediction based on ordinal regression and recurrent convolutional neural networks.
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- BMC Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1186/s12859-021-04369-0
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- Article
Boosting scRNA-seq data clustering by cluster-aware feature weighting.
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- BMC Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1186/s12859-021-04033-7
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- Article
Link Prediction based on Quantum-Inspired Ant Colony Optimization.
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- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-31254-3
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- Article
Fault Location Method Based on Dynamic Operation and Maintenance Map and Common Alarm Points Analysis.
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- Algorithms, 2024, v. 17, n. 5, p. 217, doi. 10.3390/a17050217
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- Article
Exploiting topic modeling to boost metagenomic reads binning.
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- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S5-S2
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- Article
Protein function prediction by collective classification with explicit and implicit edges in protein-protein interaction networks.
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- BMC Bioinformatics, 2013, v. 14, n. Suppl 12, p. 1, doi. 10.1186/1471-2105-14-S12-S4
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- Article
miRFam: an effective automatic miRNA classification method based on n-grams and a multiclass SVM.
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- BMC Bioinformatics, 2011, v. 12, n. 1, p. 216, doi. 10.1186/1471-2105-12-216
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- Article
MiRenSVM: towards better prediction of microRNA precursors using an ensemble SVM classifier with multi-loop features.
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- BMC Bioinformatics, 2010, v. 11, p. 1, doi. 10.1186/1471-2105-11-S11-S11
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- Article
Random Sierpinski network with scale-free small-world and modular structure.
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- European Physical Journal B: Condensed Matter, 2008, v. 65, n. 1, p. 141, doi. 10.1140/epjb/e2008-00305-8
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- Article
Transition from fractal to non-fractal scalings in growing scale-free networks.
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- European Physical Journal B: Condensed Matter, 2008, v. 64, n. 2, p. 277, doi. 10.1140/epjb/e2008-00299-1
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- Article
Topologies and Laplacian spectra of a deterministic uniform recursive tree.
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- European Physical Journal B: Condensed Matter, 2008, v. 63, n. 4, p. 507, doi. 10.1140/epjb/e2008-00262-2
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- Article
Incompatibility networks as models of scale-free small-world graphs.
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- European Physical Journal B: Condensed Matter, 2007, v. 60, n. 2, p. 259, doi. 10.1140/epjb/e2007-00344-7
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- Article
Recursive weighted treelike networks.
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- European Physical Journal B: Condensed Matter, 2007, v. 59, n. 1, p. 99, doi. 10.1140/epjb/e2007-00264-6
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- Article
Prediction of Disk Failure Based on Classification Intensity Resampling.
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- Information (2078-2489), 2024, v. 15, n. 6, p. 322, doi. 10.3390/info15060322
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- Article
A new method for enhancer prediction based on deep belief network.
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- BMC Bioinformatics, 2017, v. 18, p. 99, doi. 10.1186/s12859-017-1828-0
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- Article
An effective approach to detecting both small and large complexes from protein-protein interaction networks.
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- BMC Bioinformatics, 2017, v. 18, p. 19, doi. 10.1186/s12859-017-1820-8
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- Article
Fusing multiple protein-protein similarity networks to effectively predict lncRNA-protein interactions.
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- BMC Bioinformatics, 2017, v. 18, p. 11, doi. 10.1186/s12859-017-1819-1
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- Article
iHMS: a database integrating human histone modification data across developmental stages and tissues.
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- 2017
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- Product Review
Inferring new indications for approved drugs via random walk on drug-disease heterogenous networks.
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- BMC Bioinformatics, 2016, v. 17, p. 269, doi. 10.1186/s12859-016-1336-7
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- Article
Dynamic epigenetic mode analysis using spatial temporal clustering.
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- BMC Bioinformatics, 2016, v. 17, p. 213, doi. 10.1186/s12859-016-1331-z
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- Article
Single-cell RNA-seq data clustering: A survey with performance comparison study.
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- Journal of Bioinformatics & Computational Biology, 2020, v. 18, n. 4, p. N.PAG, doi. 10.1142/S0219720020400053
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- Article
Denoising Protein–Protein interaction network via variational graph auto-encoder for protein complex detection.
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- Journal of Bioinformatics & Computational Biology, 2020, v. 18, n. 3, p. N.PAG, doi. 10.1142/S0219720020400107
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- Article
Computationally predicting protein-RNA interactions using only positive and unlabeled examples.
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- Journal of Bioinformatics & Computational Biology, 2015, v. 13, n. 3, p. -1, doi. 10.1142/S021972001541005X
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- Article
WHEN CLOUD COMPUTING MEETS BIOINFORMATICS: A REVIEW.
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- Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 5, p. -1, doi. 10.1142/S0219720013300025
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- Article
Self-supervised learning with chemistry-aware fragmentation for effective molecular property prediction.
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- Briefings in Bioinformatics, 2023, v. 24, n. 5, p. 1, doi. 10.1093/bib/bbad296
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- Article
Deep structural clustering for single-cell RNA-seq data jointly through autoencoder and graph neural network.
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- Briefings in Bioinformatics, 2022, v. 23, n. 2, p. 1, doi. 10.1093/bib/bbac018
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- Article
A comparative evaluation on prediction methods of nucleosome positioning.
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- Briefings in Bioinformatics, 2014, v. 15, n. 6, p. 1014, doi. 10.1093/bib/bbt062
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- Article
Choosing appropriate models for protein–protein interaction networks: a comparison study.
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- Briefings in Bioinformatics, 2014, v. 15, n. 5, p. 823, doi. 10.1093/bib/bbt014
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- Article
Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM.
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- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09670-4
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- Article
Towards a Secure Medium Access Control Protocol for Cluster-Based Underwater Wireless Sensor Networks.
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- International Journal of Distributed Sensor Networks, 2015, v. 2015, p. 1, doi. 10.1155/2015/325474
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- Article
Classification of Marine Plankton Based on Few-shot Learning.
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- Arabian Journal for Science & Engineering (Springer Science & Business Media B.V. ), 2021, v. 46, n. 9, p. 9253, doi. 10.1007/s13369-021-05786-2
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- Article
CPredictor3.0: detecting protein complexes from PPI networks with expression data and functional annotations.
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- BMC Systems Biology, 2017, v. 11, p. 45, doi. 10.1186/s12918-017-0504-3
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- Article
A New Method for Extracting the Hierarchical Organization of Networks.
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- International Journal of Information Technology & Decision Making, 2017, v. 16, n. 5, p. 1359, doi. 10.1142/S021962201450028X
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- Article
Molecular property prediction based on graph structure learning.
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- Bioinformatics, 2024, v. 40, n. 5, p. 1, doi. 10.1093/bioinformatics/btae304
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- Article
PCGAN: a generative approach for protein complex identification from protein interaction networks.
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- Bioinformatics, 2023, v. 39, n. 8, p. 1, doi. 10.1093/bioinformatics/btad473
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- Article
Molecular property prediction by semantic-invariant contrastive learning.
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- Bioinformatics, 2023, v. 39, n. 8, p. 1, doi. 10.1093/bioinformatics/btad462
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- Article
Molecular property prediction by contrastive learning with attention-guided positive sample selection.
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- Bioinformatics, 2023, v. 39, n. 5, p. 1, doi. 10.1093/bioinformatics/btad258
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- Article
Effective drug–target interaction prediction with mutual interaction neural network.
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- Bioinformatics, 2022, v. 38, n. 14, p. 3582, doi. 10.1093/bioinformatics/btac377
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- Article
FraGAT: a fragment-oriented multi-scale graph attention model for molecular property prediction.
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- Bioinformatics, 2021, v. 37, n. 18, p. 2981, doi. 10.1093/bioinformatics/btab195
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- Article
Enhancing Routing Robustness of Unstructured Peer-to-Peer Networks Using Mobile Agents.
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- Journal of Network & Systems Management, 2012, v. 20, n. 3, p. 309, doi. 10.1007/s10922-011-9203-3
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- Article
Protein Function Prediction Based on PPI Networks: Network Reconstruction vs Edge Enrichment.
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- Frontiers in Genetics, 2021, v. 12, p. 1, doi. 10.3389/fgene.2021.758131
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- Article