Works by Grossniklaus, Ueli

Results: 112

Rcount: simple and flexible RNA-Seq read counting.

Published in:

Bioinformatics, 2015, v. 31, n. 3, p. 436, doi. 10.1093/bioinformatics/btu680

By:

Schmid, Marc W.;
Grossniklaus, Ueli

Publication type:

Article

Transgenerational epigenetic inheritance: how important is it?

Published in:

Nature Reviews Genetics, 2013, v. 14, n. 11, p. 820, doi. 10.1038/nrg3595

By:

Grossniklaus, Ueli;
Kelly, William G.;
Ferguson-Smith, Anne C.;
Pembrey, Marcus;
Lindquist, Susan

Publication type:

Article

SMC5/6 Complex Subunit NSE4A Is Involved in DNA Damage Repair and Seed Development.

Published in:

Plant Cell, 2019, v. 31, n. 7, p. 1579, doi. 10.1105/tpc.18.00043

By:

Díaz, Mariana;
Pečinková, Petra;
Nowicka, Anna;
Baroux, Célia;
Sakamoto, Takuya;
Gandha, Priscilla Yuliani;
Jeřábková, Hana;
Matsunaga, Sachihiro;
Grossniklaus, Ueli;
1, Ales Pecinka

Publication type:

Article

Armadillo Repeat Gene ZAK IXIK Promotes Arabidopsis Early Embryo and Endosperm Development through a Distinctive Gametophytic Maternal Effect.

Published in:

Plant Cell, 2012, v. 24, n. 10, p. 4026, doi. 10.1105/tpc.112.102384

By:

Ngo, Quy A.;
Baroux, Celia;
Guthörl, Daniela;
Mozerov, Peter;
Collinge, Margaret A.;
Sundaresan, Venkatesan;
Grossniklaus, Ueli

Publication type:

Article

Molecular Characterization of the glauce Mutant: A Central Cell–Specific Function Is Required for Double Fertilization in Arabidopsis.

Published in:

Plant Cell, 2012, v. 24, n. 8, p. 3264, doi. 10.1105/tpc.112.096420

By:

Leshem, Yehoram;
Johnson, Cameron;
Wuest, Samuel E.;
Song, Xiaoya;
Ngo, Quy A.;
Grossniklaus, Ueli;
Sundaresan, Venkatesan

Publication type:

Article

Tackling Drought Stress: RECEPTOR-LIKE KINASES Present New Approaches.

Published in:

Plant Cell, 2012, v. 24, n. 6, p. 2262, doi. 10.1105/tpc.112.096677

By:

Marshall, Alex;
Aalen, Reidunn B.;
Audenaert, Dominique;
Beeckman, Tom;
Broadley, Martin R.;
Butenko, Melinka A.;
Caño-Delgado, Ana I.;
Vries, Sacco de;
Dresselhaus, Thomas;
Felix, Georg;
Graham, Neil S.;
Foulkes, John;
Granier, Christine;
Greb, Thomas;
Grossniklaus, Ueli;
Hammond, John P.;
Heidstra, Renze;
Hodgman, Charlie;
Hothorn, Michael;
Inzé, Dirk

Publication type:

Article

Regulation and Flexibility of Genomic Imprinting during Seed Development.

Published in:

Plant Cell, 2011, v. 23, n. 1, p. 16, doi. 10.1105/tpc.110.081018

By:

Raissig, Michael T.;
Baroux, Célia;
Grossniklaus, Ueli

Publication type:

Article

VERDANDI Is a Direct Target of the MADS Domain Ovule Identity Complex and Affects Embryo Sac Differentiation in Arabidopsis.

Published in:

Plant Cell, 2010, v. 22, n. 6, p. 1702, doi. 10.1105/tpc.109.068627

By:

Matias-Hernandez, Luis;
Battaglia, Raffaella;
Galbiati, Francesca;
Rubes, Marco;
Eichenberger, Christof;
Grossniklaus, Ueli;
Kater, Martin M.;
Colombo, Lucia

Publication type:

Article

Embryo and Endosperm Inherit Distinct Chromatin and Transcriptional States from the Female Gametes in Arabidopsis.

Published in:

Plant Cell, 2010, v. 22, n. 2, p. 307, doi. 10.1105/tpc.109.071647

By:

Pillot, Marion;
Baroux, Célia;
Vazquez, Mario Arteaga;
Autran, Daphné;
Leblanc, Olivier;
Vielle-Calzada, Jean Philippe;
Grossniklaus, Ueli;
Grimanelli, Daniel

Publication type:

Article

Low-Input High-Molecular-Weight DNA Extraction for Long-Read Sequencing From Plants of Diverse Families.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.883897

By:

Russo, Alessia;
Mayjonade, Baptiste;
Frei, Daniel;
Potente, Giacomo;
Kellenberger, Roman T.;
Frachon, Léa;
Copetti, Dario;
Studer, Bruno;
Frey, Jürg E.;
Grossniklaus, Ueli;
Schlüter, Philipp M.

Publication type:

Article

Low-Input High-Molecular-Weight DNA Extraction for Long-Read Sequencing From Plants of Diverse Families.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.883897

By:

Russo, Alessia;
Mayjonade, Baptiste;
Frei, Daniel;
Potente, Giacomo;
Kellenberger, Roman T.;
Frachon, Léa;
Copetti, Dario;
Studer, Bruno;
Frey, Jürg E.;
Grossniklaus, Ueli;
Schlüter, Philipp M.

Publication type:

Article

Sexual and Apogamous Species of Woodferns Show Different Protein and Phytohormone Profiles.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.718932

By:

Fernández, Helena;
Grossmann, Jonas;
Gagliardini, Valeria;
Feito, Isabel;
Rivera, Alejandro;
Rodríguez, Lucía;
Quintanilla, Luis G.;
Quesada, Víctor;
Cañal, Mª Jesús;
Grossniklaus, Ueli

Publication type:

Article

A pseudomolecule‐scale genome assembly of the liverwort Marchantia polymorpha.

Published in:

Plant Journal, 2020, v. 101, n. 6, p. 1378, doi. 10.1111/tpj.14602

By:

Diop, Seydina I.;
Subotic, Oliver;
Giraldo‐Fonseca, Alejandro;
Waller, Manuel;
Kirbis, Alexander;
Neubauer, Anna;
Potente, Giacomo;
Murray‐Watson, Rachel;
Boskovic, Filip;
Bont, Zoe;
Hock, Zsofia;
Payton, Adam C.;
Duijsings, Daniël;
Pirovano, Walter;
Conti, Elena;
Grossniklaus, Ueli;
McDaniel, Stuart F.;
Szövényi, Péter

Publication type:

Article

The walls have ears: the role of plant CrRLK1Ls in sensing and transducing extracellular signals.

Published in:

Journal of Experimental Botany, 2011, v. 62, n. 5, p. 1581, doi. 10.1093/jxb/erq445

By:

Boisson-Dernier, Aurélien;
Kessler, Sharon A.;
Grossniklaus, Ueli

Publication type:

Article

TRAUCO, a Trithorax-group gene homologue, is required for early embryogenesis in Arabidopsis thaliana.

Published in:

Journal of Experimental Botany, 2010, v. 61, n. 4, p. 1215, doi. 10.1093/jxb/erp396

By:

Aquea, Felipe;
Johnston, Amal J.;
Cañon, Paola;
Grossniklaus, Ueli;
Arce-Johnson, Patricio

Publication type:

Article

Assembly of the Boechera retrofracta Genome and Evolutionary Analysis of Apomixis-Associated Genes.

Published in:

Genes, 2018, v. 9, n. 4, p. 185, doi. 10.3390/genes9040185

By:

Kliver, Sergei;
Rayko, Mike;
Komissarov, Alexey;
Bakin, Evgeny;
Zhernakova, Daria;
Prasad, Kasavajhala;
Rushworth, Catherine;
Baskar, R.;
Smetanin, Dmitry;
Schmutz, Jeremy;
Rokhsar, Daniel S.;
Mitchell-Olds, Thomas;
Grossniklaus, Ueli;
Brukhin, Vladimir

Publication type:

Article

Cell type-specific genome scans of DNA methylation divergence indicate an important role for transposable elements.

Published in:

Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02068-2

By:

Kartal, Önder;
Schmid, Marc W.;
Grossniklaus, Ueli

Publication type:

Article

The Arabidopsis thaliana MEDEA Polycomb group protein controls expression of PHERES1 by parental imprinting.

Published in:

Nature Genetics, 2005, v. 37, n. 1, p. 28, doi. 10.1038/ng1495

By:

Köhler, Claudia;
Page, Damian R;
Gagliardini, Valeria;
Grossniklaus, Ueli

Publication type:

Article

Plant genetics: a decade of integration.

Published in:

Nature Genetics, 2003, v. 33, p. 294, doi. 10.1038/ng1108

By:

Pruitt, Robert E.;
Bowman, John L.;
Grossniklaus, Ueli

Publication type:

Article

Efficient preparation of Arabidopsis pollen tubes for ultrastructural analysis using chemical and cryo-fixation.

Published in:

BMC Plant Biology, 2017, v. 17, p. 1, doi. 10.1186/s12870-017-1136-x

By:

Ndinyanka Fabrice, Tohnyui;
Kaech, Andres;
Barmettler, Gery;
Eichenberger, Christof;
Paul Knox, J.;
Grossniklaus, Ueli;
Ringli, Christoph

Publication type:

Article

A single touch can provide sufficient mechanical stimulation to trigger Venus flytrap closure.

Published in:

PLoS Biology, 2020, v. 18, n. 7, p. 1, doi. 10.1371/journal.pbio.3000740

By:

Burri, Jan T.;
Saikia, Eashan;
Läubli, Nino F.;
Vogler, Hannes;
Wittel, Falk K.;
Rüggeberg, Markus;
Herrmann, Hans J.;
Burgert, Ingo;
Nelson, Bradley J.;
Grossniklaus, Ueli

Publication type:

Article

Organ geometry channels reproductive cell fate in the Arabidopsis ovule primordium.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.66031

By:

Hernandez-Lagana, Elvira;
Mosca, Gabriella;
Mendocilla-Sato, Ethel;
Pires, Nuno;
Frey, Anja;
Giraldo-Fonseca, Alejandro;
Michaud, Caroline;
Grossniklaus, Ueli;
Hamant, Olivier;
Godin, Christophe;
Boudaoud, Arezki;
Grimanelli, Daniel;
Autran, Daphné;
Baroux, Célia

Publication type:

Article

Transcriptome and Proteome Data Reveal Candidate Genes for Pollinator Attraction in Sexually Deceptive Orchids

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0064621

By:

Sedeek, Khalid E. M.;
Qi, Weihong;
Schauer, Monica A.;
Gupta, Alok K.;
Poveda, Lucy;
Xu, Shuqing;
Liu, Zhong-Jian;
Grossniklaus, Ueli;
Schiestl, Florian P.;
Schlüter, Philipp M.

Publication type:

Article

A Powerful Method for Transcriptional Profiling of Specific Cell Types in Eukaryotes: Laser-Assisted Microdissection and RNA Sequencing.

Published in:

PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0029685

By:

Schmid, Marc W.;
Schmidt, Anja;
Klostermeier, Ulrich C.;
Barann, Matthias;
Rosenstiel, Philip;
Grossniklaus, Ueli

Publication type:

Article

Correction to: Mechanical factors contributing to the Venus flytrap's rate-dependent response to stimuli.

Published in:

2021

By:

Saikia, Eashan;
Läubli, Nino F.;
Vogler, Hannes;
Rüggeberg, Markus;
Herrmann, Hans J.;
Burgert, Ingo;
Burri, Jan T.;
Nelson, Bradley J.;
Grossniklaus, Ueli;
Wittel, Falk K.

Publication type:

Correction Notice

Mechanical factors contributing to the Venus flytrap's rate-dependent response to stimuli.

Published in:

Biomechanics & Modeling in Mechanobiology, 2021, v. 20, n. 6, p. 2287, doi. 10.1007/s10237-021-01507-8

By:

Saikia, Eashan;
Läubli, Nino F.;
Vogler, Hannes;
Rüggeberg, Markus;
Herrmann, Hans J.;
Burgert, Ingo;
Burri, Jan T.;
Nelson, Bradley J.;
Grossniklaus, Ueli;
Wittel, Falk K.

Publication type:

Article

Uncovering genes involved in pollinator‐driven mating system shifts and selfing syndrome evolution in Brassica rapa.

Published in:

New Phytologist, 2024, v. 243, n. 3, p. 1220, doi. 10.1111/nph.19880

By:

Kofler, Xeniya V.;
Grossniklaus, Ueli;
Schiestl, Florian P.;
Frachon, Léa

Publication type:

Article

The Boechera Genus as a Resource for Apomixis Research.

Published in:

Frontiers in Plant Science, 2019, p. N.PAG, doi. 10.3389/fpls.2019.00392

By:

Brukhin, Vladimir;
Osadtchiy, Jaroslaw V.;
Florez-Rueda, Ana Marcela;
Smetanin, Dmitry;
Bakin, Evgeny;
Nobre, Margarida Sofia;
Grossniklaus, Ueli

Publication type:

Article

Single-gene resolution of diversity-driven overyielding in plant genotype mixtures.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39130-z

By:

Wuest, Samuel E.;
Schulz, Lukas;
Rana, Surbhi;
Frommelt, Julia;
Ehmig, Merten;
Pires, Nuno D.;
Grossniklaus, Ueli;
Hardtke, Christian S.;
Hammes, Ulrich Z.;
Schmid, Bernhard;
Niklaus, Pascal A.

Publication type:

Article

Plant germline development: a tale of cross-talk, signaling, and cellular interactions.

Published in:

2011

By:

Grossniklaus, Ueli

Publication type:

Editorial

Molecular control of autonomous embryo and endosperm development.

Published in:

Sexual Plant Reproduction, 2008, v. 21, n. 1, p. 79, doi. 10.1007/s00497-007-0061-9

By:

Curtis, Mark;
Grossniklaus, Ueli

Publication type:

Article

halfman, an Arabidopsis male gametophytic mutant associated with a 150 kb chromosomal deletion adjacent to an introduced Ds transposable element.

Published in:

Sexual Plant Reproduction, 2003, v. 16, n. 2, p. 99, doi. 10.1007/s00497-003-0181-9

By:

Oh, Sung-Aeong;
Park, Soon Ki;
Jang, Inok;
Howden, Ross;
Moore, James M.;
Grossniklaus, Ueli;
Twell, David

Publication type:

Article

HiCdat: a fast and easy-to-use Hi-C data analysis tool.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0678-x

By:

Schmid, Marc W.;
Grob, Stefan;
Grossniklaus, Ueli

Publication type:

Article

HiCdat: a fast and easy-to-use Hi-C data analysis tool.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 277, doi. 10.1186/s12859-015-0678-x

By:

Schmid, Marc W.;
Grob, Stefan;
Grossniklaus, Ueli

Publication type:

Article

Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development.

Published in:

PLoS Genetics, 2016, v. 12, n. 1, p. 1, doi. 10.1371/journal.pgen.1005806

By:

Pires, Nuno D.;
Bemer, Marian;
Müller, Lena M.;
Baroux, Célia;
Spillane, Charles;
Grossniklaus, Ueli

Publication type:

Article

SNP-Ratio Mapping (SRM): Identifying Lethal Alleles and Mutations in Complex Genetic Backgrounds by Next-Generation Sequencing.

Published in:

Genetics, 2012, v. 191, n. 4, p. 1381, doi. 10.1534/genetics.112.141341

By:

Lindner, Heike;
Raissig, Michael T.;
Sailer, Christian;
Shimosato-Asano, Hiroko;
Bruggmann, Rémy;
Grossniklaus, Ueli

Publication type:

Article

Analysis of Transposon Insertion Mutants Highlights the Diversity of Mechanisms Underlying Male Progamic Development in Arabidopsis.

Published in:

Genetics, 2004, v. 167, n. 4, p. 1975, doi. 10.1534/genetics.104.030270

By:

Lalanne, Eric;
Michaelidis, Christos;
Moore, James M.;
Gagliano, Wendy;
Johnson, Andrew;
Patel, Ramesh;
Howden, Ross;
Vielle-Calzada, Jean-Phillippe;
Grossniklaus, Ueli;
Twell, David

Publication type:

Article

Arabidopsis Genes Essential for Seedling Viability: Isolation of Insertional Mutants and...

Published in:

Genetics, 2001, v. 159, n. 4, p. 1765, doi. 10.1093/genetics/159.4.1765

By:

Budziszewski, Gregory J.;
Lewis, Sharon Potter;
Glover, Lyn Wegrich;
Reineke, Jennifer;
Jones, Gary;
Ziemnik, Lisa Schlater;
Lonowski, Jennifer;
Nyfeler, Beat;
Aux, George;
Qing Zhou;
McElver, John;
Patton, David A.;
Martienssen, Robert;
Grossniklaus, Ueli;
Hong Ma;
Law, Marcus;
Levin, Joshua Z.

Publication type:

Article

The Polycomb group protein MEDEA and the DNA methyltransferase MET1 interact to repress autonomous endosperm development in Arabidopsis.

Published in:

Plant Journal, 2013, v. 73, n. 5, p. 776, doi. 10.1111/tpj.12070

By:

Schmidt, Anja;
Wöhrmann, Heike J. P.;
Raissig, Michael T.;
Arand, Julia;
Gheyselinck, Jacqueline;
Gagliardini, Valeria;
Heichinger, Christian;
Walter, Joern;
Grossniklaus, Ueli

Publication type:

Article

The pollen tube: a soft shell with a hard core.

Published in:

Plant Journal, 2013, v. 73, n. 4, p. 617, doi. 10.1111/tpj.12061

By:

Vogler, Hannes;
Draeger, Christian;
Weber, Alain;
Felekis, Dimitris;
Eichenberger, Christof;
Routier‐Kierzkowska, Anne‐Lise;
Boisson‐Dernier, Aurélien;
Ringli, Christoph;
Nelson, Bradley J.;
Smith, Richard S.;
Grossniklaus, Ueli

Publication type:

Article

Characterization of the phosphoproteome of mature Arabidopsis pollen.

Published in:

Plant Journal, 2012, v. 72, n. 1, p. 89, doi. 10.1111/j.1365-313X.2012.05061.x

By:

Mayank, Pururawa;
Grossman, Jonas;
Wuest, Samuel;
Boisson-Dernier, Aurélien;
Roschitzki, Bernd;
Nanni, Paolo;
Nühse, Thomas;
Grossniklaus, Ueli

Publication type:

Article

Analysis of plant germline development by high-throughput RNA profiling: technical advances and new insights.

Published in:

Plant Journal, 2012, v. 70, n. 1, p. 18, doi. 10.1111/j.1365-313X.2012.04897.x

By:

Schmidt, Anja;
Schmid, Marc W.;
Grossniklaus, Ueli

Publication type:

Article

Members of the RKD transcription factor family induce an egg cell-like gene expression program.

Published in:

Plant Journal, 2011, v. 67, n. 2, p. 280, doi. 10.1111/j.1365-313X.2011.04592.x

By:

Kőszegi, Dávid;
Johnston, Amal J.;
Rutten, Twan;
Czihal, Andreas;
Altschmied, Lothar;
Kumlehn, Jochen;
Wüst, Samuel E. J.;
Kirioukhova, Olga;
Gheyselinck, Jacqueline;
Grossniklaus, Ueli;
Bäumlein, Helmut

Publication type:

Article

Intronic regulatory elements determine the divergent expression patterns of AGAMOUS-LIKE6 subfamily members in Arabidopsis.

Published in:

Plant Journal, 2009, v. 59, n. 6, p. 987, doi. 10.1111/j.1365-313X.2009.03928.x

By:

Schauer, Stephen E.;
Schlüter, Philipp M.;
Baskar, Ramarmurthy;
Gheyselinck, Jacqueline;
Bolaños, Arturo;
Curtis, Mark D.;
Grossniklaus, Ueli

Publication type:

Article

CLO/GFA1 and ATO are novel regulators of gametic cell fate in plants.

Published in:

Plant Journal, 2008, v. 56, n. 6, p. 913, doi. 10.1111/j.1365-313X.2008.03650.x

By:

Moll, Cordula;
von Lyncker, Ludwig;
Zimmermann, Steffi;
Kägi, Christina;
Baumann, Nadine;
Twell, David;
Grossniklaus, Ueli;
Groß-Hardt, Rita

Publication type:

Article

Genomic imprinting, methylation and molecular evolution of maize Enhancer of zeste ( Mez) homologs.

Published in:

Plant Journal, 2007, v. 49, n. 2, p. 325, doi. 10.1111/j.1365-313X.2006.02965.x

By:

Haun, William J.;
Laoueillé-Duprat, Sylvia;
O'Connell, Mary J.;
Spillane, Charles;
Grossniklaus, Ueli;
Phillips, Allison R.;
Kaeppler, Shawn M.;
Springer, Nathan M.

Publication type:

Article

A B<sub>sister</sub> MADS-box gene involved in ovule and seed development in petunia and Arabidopsis.

Published in:

Plant Journal, 2006, v. 47, n. 6, p. 934, doi. 10.1111/j.1365-313X.2006.02846.x

By:

de Folter, Stefan;
Shchennikova, Anna V.;
Franken, John;
Busscher, Marco;
Baskar, Ramamurthy;
Grossniklaus, Ueli;
Angenent, Gerco C.;
Immink, Richard G.H.

Publication type:

Article

Contribution of epigenetic variation to adaptation in Arabidopsis.

Published in:

Nature Communications, 2018, v. 9, p. 1, doi. 10.1038/s41467-018-06932-5

By:

Schmid, Marc W.;
Heichinger, Christian;
Coman Schmid, Diana;
Guthörl, Daniela;
Gagliardini, Valeria;
Bruggmann, Rémy;
Aluri, Sirisha;
Aquino, Catharine;
Schmid, Bernhard;
Turnbull, Lindsay A.;
Grossniklaus, Ueli

Publication type:

Article

Correction: Massively Parallelized Pollen Tube Guidance and Mechanical Measurements on a Lab-on-a-Chip Platform.

Published in:

2017

By:

Shamsudhin, Naveen;
Laeubli, Nino;
Atakan, Huseyin Baris;
Vogler, Hannes;
Hu, Chengzhi;
Haeberle, Walter;
Sebastian, Abu;
Grossniklaus, Ueli;
Nelson, Bradley J.

Publication type:

Correction Notice

Massively Parallelized Pollen Tube Guidance and Mechanical Measurements on a Lab-on-a-Chip Platform.

Published in:

PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0168138

By:

Shamsudhin, Naveen;
Laeubli, Nino;
Atakan, Huseyin Baris;
Vogler, Hannes;
Hu, Chengzhi;
Haeberle, Walter;
Sebastian, Abu;
Grossniklaus, Ueli;
Nelson, Bradley J.

Publication type:

Article