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Expression-based subtypes define pathologic response to neoadjuvant immune-checkpoint inhibitors in muscle-invasive bladder cancer.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37568-9
By:
- Robertson, A. Gordon;
- Meghani, Khyati;
- Cooley, Lauren Folgosa;
- McLaughlin, Kimberly A.;
- Fall, Leigh Ann;
- Yu, Yanni;
- Castro, Mauro A. A.;
- Groeneveld, Clarice S.;
- de Reyniès, Aurélien;
- Nazarov, Vadim I.;
- Tsvetkov, Vasily O.;
- Choy, Bonnie;
- Raggi, Daniele;
- Marandino, Laura;
- Montorsi, Francesco;
- Powles, Thomas;
- Necchi, Andrea;
- Meeks, Joshua J.
Publication type:
Article
Novel lncRNAs Co-Expression Networks Identifies LINC00504 with Oncogenic Role in Luminal A Breast Cancer Cells.
Published in:
International Journal of Molecular Sciences, 2021, v. 22, n. 5, p. 2420, doi. 10.3390/ijms22052420
By:
- Mathias, Carolina;
- Groeneveld, Clarice S.;
- Trefflich, Sheyla;
- Zambalde, Erika P.;
- Lima, Rubens S.;
- Urban, Cícero A.;
- Prado, Karin B.;
- Ribeiro, Enilze M. S. F.;
- Castro, Mauro A. A.;
- Gradia, Daniela F.;
- de Oliveira, Jaqueline C.
Publication type:
Article
An integrated multi-omics analysis identifies prognostic molecular subtypes of non-muscle-invasive bladder cancer.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22465-w
By:
- Lindskrog, Sia Viborg;
- Prip, Frederik;
- Lamy, Philippe;
- Taber, Ann;
- Groeneveld, Clarice S.;
- Birkenkamp-Demtröder, Karin;
- Jensen, Jørgen Bjerggaard;
- Strandgaard, Trine;
- Nordentoft, Iver;
- Christensen, Emil;
- Sokac, Mateo;
- Birkbak, Nicolai J.;
- Maretty, Lasse;
- Hermann, Gregers G.;
- Petersen, Astrid C.;
- Weyerer, Veronika;
- Grimm, Marc-Oliver;
- Horstmann, Marcus;
- Sjödahl, Gottfrid;
- Höglund, Mattias
Publication type:
Article
TreeAndLeaf: an R/Bioconductor package for graphs and trees with focus on the leaves.
Published in:
Bioinformatics, 2022, v. 38, n. 5, p. 1463, doi. 10.1093/bioinformatics/btab819
By:
- Cardoso, Milena A;
- Rizzardi, Luis E A;
- Kume, Leonardo W;
- Groeneveld, Clarice S;
- Trefflich, Sheyla;
- Morais, Diego A A;
- Dalmolin, Rodrigo J S;
- Ponder, Bruce A J;
- Meyer, Kerstin B;
- Castro, Mauro A A
Publication type:
Article
Integrated molecular and pharmacological characterization of patientderived xenografts from bladder and ureteral cancers identifies new potential therapies.
Published in:
Frontiers in Oncology, 2022, v. 12, p. 1, doi. 10.3389/fonc.2022.930731
By:
- Lang, Hervé;
- Béraud, Claire;
- Cabel, Luc;
- Fontugne, Jacqueline;
- Lassalle, Myriam;
- Krucker, Clémentine;
- Dufour, Florent;
- Groeneveld, Clarice S.;
- Dixon, Victoria;
- Xiangyu Meng;
- Kamoun, Aurélie;
- Chapeaublanc, Elodie;
- De Reynies, Aurélien;
- Gamé, Xavier;
- Rischmann, Pascal;
- Bieche, Ivan;
- Masliah-Planchon, Julien;
- Beaurepere, Romane;
- Allory, Yves;
- Lindner, Véronique
Publication type:
Article
RTNduals: an R/Bioconductor package for analysis of co-regulation and inference of dual regulons.
Published in:
Bioinformatics, 2019, v. 35, n. 24, p. 5357, doi. 10.1093/bioinformatics/btz534
By:
- Chagas, Vinicius S;
- Groeneveld, Clarice S;
- Oliveira, Kelin G;
- Trefflich, Sheyla;
- Almeida, Rodrigo C de;
- Ponder, Bruce A J;
- Meyer, Kerstin B;
- Jones, Steven J M;
- Robertson, A Gordon;
- Castro, Mauro A A
Publication type:
Article
RTNsurvival: an R/Bioconductor package for regulatory network survival analysis.
Published in:
Bioinformatics, 2019, v. 35, n. 21, p. 4488, doi. 10.1093/bioinformatics/btz229
By:
- Groeneveld, Clarice S;
- Chagas, Vinicius S;
- Jones, Steven J M;
- Robertson, A Gordon;
- Ponder, Bruce A J;
- Meyer, Kerstin B;
- Castro, Mauro A A
Publication type:
Article
Long non-coding RNAs identify a subset of luminal muscle-invasive bladder cancer patients with favorable prognosis.
Published in:
Genome Medicine, 2019, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13073-019-0669-z
By:
- de Jong, Joep J.;
- Liu, Yang;
- Robertson, A. Gordon;
- Seiler, Roland;
- Groeneveld, Clarice S.;
- van der Heijden, Michiel S.;
- Wright, Jonathan L.;
- Douglas, James;
- Dall'Era, Marc;
- Crabb, Simon J.;
- van Rhijn, Bas W. G.;
- van Kessel, Kim E. M.;
- Davicioni, Elai;
- Castro, Mauro A. A.;
- Lotan, Yair;
- Zwarthoff, Ellen C.;
- Black, Peter C.;
- Boormans, Joost L.;
- Gibb, Ewan A.
Publication type:
Article

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