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Diversity of cis-regulatory elements associated with auxin response in Arabidopsis thaliana.
- Published in:
- Journal of Experimental Botany, 2018, v. 69, n. 2, p. 329, doi. 10.1093/jxb/erx254
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- Article
Acute Effects of an Inorganic Phosphorus Additive on Mineral Metabolism and Cardiometabolic Risk Factors in Healthy Subjects.
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- Journal of Clinical Endocrinology & Metabolism, 2022, v. 107, n. 2, p. E852, doi. 10.1210/clinem/dgab635
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- Article
Current Understanding of the HIF-1-Dependent Metabolism in Oral Squamous Cell Carcinoma.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 17, p. 6083, doi. 10.3390/ijms21176083
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- Article
Causes and Consequences of A Glutamine Induced Normoxic HIF1 Activity for the Tumor Metabolism.
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- International Journal of Molecular Sciences, 2019, v. 20, n. 19, p. 4742, doi. 10.3390/ijms20194742
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- Article
Combining phylogenetic footprinting with motif models incorporating intra-motif dependencies.
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- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1495-1
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- Article
Normoxic accumulation of HIF1α is associated with glutaminolysis.
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- Clinical Oral Investigations, 2017, v. 21, n. 1, p. 211, doi. 10.1007/s00784-016-1780-9
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- Article
Performance of Mapping Approaches for Whole-Genome Bisulfite Sequencing Data in Crop Plants.
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- Frontiers in Plant Science, 2020, v. 10, p. 1, doi. 10.3389/fpls.2020.00176
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- Article
Transcriptional Analysis of Total CD8<sup>+</sup> T Cells and CD8<sup>+</sup>CD45RA<sup>-</sup> Memory T Cells From Young and Old Healthy Blood Donors.
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- Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.806906
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- Article
Whole‐transcriptome analysis reveals genetic factors underlying flowering time regulation in rapeseed (Brassica napus L.).
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- Plant, Cell & Environment, 2018, v. 41, n. 8, p. 1935, doi. 10.1111/pce.13353
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- Article
Phylogenetic footprints in fern spore- and seed-specific gene promoters.
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- Plant Journal, 2008, v. 53, n. 3, p. 414, doi. 10.1111/j.1365-313X.2007.03354.x
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- Article
Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis.
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- Nucleic Acids Research, 2014, v. 42, n. 15, p. 1, doi. 10.1093/nar/gku716
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- Article
A general approach for discriminative de novo motif discovery from high-throughput data.
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- Nucleic Acids Research, 2013, v. 41, n. 21, p. e197, doi. 10.1093/nar/gkt831
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- Article
Mineralocorticoid receptor interaction with SP1 generates a new response element for pathophysiologically relevant gene expression.
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- Nucleic Acids Research, 2013, v. 41, n. 17, p. 8045, doi. 10.1093/nar/gkt581
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- Article
Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon.
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- Nucleic Acids Research, 2012, v. 40, n. 17, p. 8240, doi. 10.1093/nar/gks594
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- Article
miRGen 2.0: a database of microRNA genomic information and regulation.
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- Nucleic Acids Research, 2010, v. 38, p. D137, doi. 10.1093/nar/gkp888
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- Article
Evaluation of methods for modeling transcription factor sequence specificity.
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- Nature Biotechnology, 2013, v. 31, n. 2, p. 126, doi. 10.1038/nbt.2486
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- Article
Computational identification of promoters and first exons in the human genome.
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- Nature Genetics, 2001, v. 29, n. 4, p. 412, doi. 10.1038/ng780
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- Article
tSFM 1.0: tRNA Structure–Function Mapper.
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- Bioinformatics, 2021, v. 37, n. 20, p. 3654, doi. 10.1093/bioinformatics/btab247
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- Article
Divergent Evolution of the Transcriptional Network Controlled by Snf1-Interacting Protein Sip4 in Budding Yeasts.
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- PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0139464
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- Article
Area under Precision-Recall Curves for Weighted and Unweighted Data.
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- PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0092209
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- Article
On the Value of Intra-Motif Dependencies of Human Insulator Protein CTCF.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0085629
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- Article
Optimized Probe Masking for Comparative Transcriptomics of Closely Related Species.
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- PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0078497
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- Article
Unity in defence: honeybee workers exhibit conserved molecular responses to diverse pathogens.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3597-6
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- Article
Phylogenetic distribution of plant snoRNA families.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3301-2
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- Article
Detecting and correcting the binding-affinity bias in ChIP-seq data using inter-species information.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2682-6
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- Article
Relationship of micro-RNA, mRNA and eIF Expression in Tamoxifen-Adapted MCF-7 Breast Cancer Cells: Impact of miR-1972 on Gene Expression, Proliferation and Migration.
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- Biomolecules (2218-273X), 2022, v. 12, n. 7, p. N.PAG, doi. 10.3390/biom12070916
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- Article
Experiment design beyond gut feeling: statistical tests and power to detect differential metabolites in mass spectrometry data.
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- Metabolomics, 2015, v. 11, n. 4, p. 851, doi. 10.1007/s11306-014-0742-y
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- Article
Inferring intra-motif dependencies of DNA binding sites from ChIP-seq data.
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- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/s12859-015-0797-4
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- Article
DiffLogo: a comparative visualization of sequence motifs.
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- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/s12859-015-0767-x
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- Article
BiNChE: A web tool and library for chemical enrichment analysis based on the ChEBI ontology.
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- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0486-3
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- Article
BiNChE: A web tool and library for chemical enrichment analysis based on the ChEBI ontology.
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- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0486-3
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- Article
DRUMS: Disk Repository with Update Management and Select option for high throughput sequencing data.
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- BMC Bioinformatics, 2014, v. 15, n. 1, p. 2, doi. 10.1186/1471-2105-15-38
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- Article
Apples and oranges: avoiding different priorsin Bayesian DNA sequence analysis.
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- BMC Bioinformatics, 2010, v. 11, p. 149, doi. 10.1186/1471-2105-11-149
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- Article
Unifying generative and discriminativelearning principles.
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- BMC Bioinformatics, 2010, v. 11, p. 98, doi. 10.1186/1471-2105-11-98
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- Article
Meta-All: a system for managing metabolic pathway information.
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- BMC Bioinformatics, 2006, v. 7, p. 465, doi. 10.1186/1471-2105-7-465
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- Article
Post-embryonic Hourglass Patterns Mark Ontogenetic Transitions in Plant Development.
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- Molecular Biology & Evolution, 2016, v. 33, n. 5, p. 1158, doi. 10.1093/molbev/msw039
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- Article
Evidence for Active Maintenance of Phylotranscriptomic Hourglass Patterns in Animal and Plant Embryogenesis.
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- Molecular Biology & Evolution, 2015, v. 32, n. 5, p. 1221, doi. 10.1093/molbev/msv012
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- Article
Natural Variation of Transcriptional Auxin Response Networks in Arabidopsis thaliana.
- Published in:
- Plant Cell, 2010, v. 22, n. 7, p. 2184, doi. 10.1105/tpc.110.073957
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- Article
VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees.
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- Nucleic Acids Research, 2006, v. 34, n. 11, p. w529, doi. 10.1093/nar/gkl212
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- Article
SNP2CAPS: a SNP and INDEL analysis tool for CAPS marker development.
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- Nucleic Acids Research, 2004, v. 32, n. 1, p. e5, doi. 10.1093/nar/gnh006
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- Article
Genetic analysis of bolting after winter in sugar beet ( Beta vulgaris L.).
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- Theoretical & Applied Genetics, 2014, v. 127, n. 11, p. 2479, doi. 10.1007/s00122-014-2392-x
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- Article
Identifying High-Risk Triple-Negative Breast Cancer Patients by Molecular Subtyping.
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- Breast Care, 2021, v. 16, n. 6, p. 637, doi. 10.1159/000519255
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- Article
Men and women differ in their diurnal expression of monocyte peroxisome proliferator-activated receptor-a in the fed but not in the fasted state.
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- FASEB Journal, 2015, v. 29, n. 7, p. 2905, doi. 10.1096/fj.14-267575
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- Article
Prediction of regulatory targets of alternative isoforms of the epidermal growth factor receptor in a glioblastoma cell line.
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- BMC Bioinformatics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12859-019-2944-9
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- Publication type:
- Article
Parsimonious Higher-Order Hidden Markov Models for Improved Array-CGH Analysis with Applications to Arabidopsis thaliana.
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- PLoS Computational Biology, 2012, v. 8, n. 1, p. 1, doi. 10.1371/journal.pcbi.1002286
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- Article
De-Novo Discovery of Differentially Abundant Transcription Factor Binding Sites Including Their Positional Preference.
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- PLoS Computational Biology, 2011, v. 7, n. 2, p. 1, doi. 10.1371/journal.pcbi.1001070
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- Article
The Interplay of Chromatin Landscape and DNA-Binding Context Suggests Distinct Modes of EIN3 Regulation in Arabidopsis thaliana.
- Published in:
- Frontiers in Plant Science, 2017, v. 7, p. 1, doi. 10.3389/fpls.2016.02044
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- Article
A Detailed Analysis of the BR<sub>1</sub> Locus Suggests a New Mechanism for Bolting after Winter in Sugar Beet (Beta vulgaris L.).
- Published in:
- Frontiers in Plant Science, 2016, v. 7, p. 1, doi. 10.3389/fpls.2016.01662
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- Publication type:
- Article
Detection of SARS-CoV-2 Derived Small RNAs and Changes in Circulating Small RNAs Associated with COVID-19.
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- Viruses (1999-4915), 2021, v. 13, n. 8, p. 1593, doi. 10.3390/v13081593
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- Article
Bioinformatics challenges of next generation sequencing.
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- IT: Information Technology, 2016, v. 58, n. 3, p. 117, doi. 10.1515/itit-2016-0029
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- Article