Works by Grenfell, Bryan T.

Results: 91

Absolute Humidity and the Seasonal Onset of Influenza in the Continental United States.

Published in:

PLoS Biology, 2010, v. 8, n. 2, p. 1, doi. 10.1371/journal.pbio.1000316

By:

Shaman, Jeffrey;
Pitzer, Virginia E.;
Viboud, Cécile;
Grenfell, Bryan T.;
Lipsitch, Marc

Publication type:

Article

Intracellular Demography and the Dynamics of Salmonella enterica Infections.

Published in:

PLoS Biology, 2006, v. 4, n. 11, p. 2091, doi. 10.1371/journal.pbio.0040349

By:

Brown, Sam P.;
Cornell, Stephen J.;
Sheppard, Mark;
Grant, Andrew J.;
Maskell, Duncan J.;
Grenfell, Bryan T.;
Mastroeni, Pietro

Publication type:

Article

Whole-Genome Analysis of Human Influenza A Virus Reveals Multiple Persistent Lineages and Reassortment among Recent H3N2 Viruses.

Published in:

PLoS Biology, 2005, v. 3, n. 9, p. 1579, doi. 10.1371/journal.pbio.0030300

By:

Holmes, Edward C.;
Ghedin, Elodie;
Miller, Naomi;
Taylor, Jill;
Yiming Bao;
St. George, Kirsten;
Grenfell, Bryan T.;
Salzberg, Steven L.;
Fraser, Claire M.;
Lipman, David J.;
Taubenberger, Jeffery K.

Publication type:

Article

Whole-Genome Analysis of Human Influenza A Virus Reveals Multiple Persistent Lineages and Reassortment among Recent H3N2 Viruses.

Published in:

PLoS Biology, 2005, v. 3, n. 7, p. 1, doi. 10.1371/journal.pbio.0030300

By:

Holmes, Edward C;
Ghedin, Elodie;
Miller, Naomi;
Taylor, Jill;
Bao, Yiming;
St George, Kirsten;
Grenfell, Bryan T;
Salzberg, Steven L;
Fraser, Claire M;
Lipman, David J;
Taubenberger, Jeffery K

Publication type:

Article

Markets as drivers of selection for highly virulent poultry pathogens.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-44777-3

By:

Sheen, Justin K.;
Rasambainarivo, Fidisoa;
Saad-Roy, Chadi M.;
Grenfell, Bryan T.;
Metcalf, C. Jessica E.

Publication type:

Article

Publisher Correction: Long-term measles antibody profiles following different vaccine schedules in China, a longitudinal study.

Published in:

2023

By:

Wang, Qianli;
Wang, Wei;
Winter, Amy K.;
Zhan, Zhifei;
Ajelli, Marco;
Trentini, Filippo;
Wang, Lili;
Li, Fangcai;
Yang, Juan;
Xiang, Xingyu;
Liao, Qiaohong;
Zhou, Jiaxin;
Guo, Jinxin;
Yan, Xuemei;
Liu, Nuolan;
Metcalf, C. Jessica E.;
Grenfell, Bryan T.;
Yu, Hongjie

Publication type:

Correction Notice

Long-term measles antibody profiles following different vaccine schedules in China, a longitudinal study.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37407-x

By:

Wang, Qianli;
Wang, Wei;
Winter, Amy K.;
Zhan, Zhifei;
Ajelli, Marco;
Trentini, Filippo;
Wang, Lili;
Li, Fangcai;
Yang, Juan;
Xiang, Xingyu;
Liao, Qiaohong;
Zhou, Jiaxin;
Guo, Jinxin;
Yan, Xuemei;
Liu, Nuolan;
Metcalf, C. Jessica E.;
Grenfell, Bryan T.;
Yu, Hongjie

Publication type:

Article

Correction: Changes in historical typhoid transmission across 16 U.S. cities, 1889–1931: Quantifying the impact of investments in water and sewer infrastructures.

Published in:

2021

By:

Phillips, Maile T.;
Owers, Katharine A.;
Grenfell, Bryan T.;
Pitzer, Virginia E.

Publication type:

Correction Notice

Changes in historical typhoid transmission across 16 U.S. cities, 1889-1931: Quantifying the impact of investments in water and sewer infrastructures.

Published in:

PLoS Neglected Tropical Diseases, 2020, v. 14, n. 3, p. 1, doi. 10.1371/journal.pntd.0008048

By:

Phillips, Maile T.;
Owers, Katharine A.;
Grenfell, Bryan T.;
Pitzer, Virginia E.

Publication type:

Article

Dynamic Perspectives on the Search for a Universal Influenza Vaccine.

Published in:

2019

By:

Saad-Roy, Chadi M;
McDermott, Adrian B;
Grenfell, Bryan T

Publication type:

journal article

Identifying Hotspots of Multidrug-Resistant Tuberculosis Transmission Using Spatial and Molecular Genetic Data.

Published in:

2016

By:

Zelner, Jonathan L.;
Murray, Megan B.;
Becerra, Mercedes C.;
Galea, Jerome;
Lecca, Leonid;
Calderon, Roger;
Yataco, Rosa;
Contreras, Carmen;
Zhang, Zibiao;
Manjourides, Justin;
Grenfell, Bryan T.;
Cohen, Ted

Publication type:

journal article

Deploying digital health data to optimize influenza surveillance at national and local scales.

Published in:

PLoS Computational Biology, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006020

By:

Lee, Elizabeth C.;
Arab, Ali;
Goldlust, Sandra M.;
Viboud, Cécile;
Grenfell, Bryan T.;
Bansal, Shweta

Publication type:

Article

A mechanistic spatio-temporal framework for modelling individual-to-individual transmission—With an application to the 2014-2015 West Africa Ebola outbreak.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 10, p. 1, doi. 10.1371/journal.pcbi.1005798

By:

Lau, Max S. Y.;
Gibson, Gavin J.;
Adrakey, Hola;
McClelland, Amanda;
Riley, Steven;
Zelner, Jon;
Streftaris, George;
Funk, Sebastian;
Metcalf, Jessica;
Dalziel, Benjamin D.;
Grenfell, Bryan T.

Publication type:

Article

Impact on Epidemic Measles of Vaccination Campaigns Triggered by Disease Outbreaks or Serosurveys: A Modeling Study.

Published in:

2016

By:

Lessler, Justin;
Metcalf, C. Jessica E.;
Cutts, Felicity T.;
Grenfell, Bryan T.

Publication type:

journal article

Correction: Routine Pediatric Enterovirus 71 Vaccination in China: a Cost-Effectiveness Analysis.

Published in:

2016

By:

Wu, Joseph T.;
Jit, Mark;
Zheng, Yaming;
Leung, Kathy;
Xing, Weijia;
Yang, Juan;
Liao, Qiaohong;
Cowling, Benjamin J.;
Yang, Bingyi;
Lau, Eric H. Y.;
Takahashi, Saki;
Farrar, Jeremy J.;
Grenfell, Bryan T.;
Leung, Gabriel M.;
Yu, Hongjie

Publication type:

corrected article

Routine Pediatric Enterovirus 71 Vaccination in China: a Cost-Effectiveness Analysis.

Published in:

2016

By:

Wu, Joseph T.;
Jit, Mark;
Zheng, Yaming;
Leung, Kathy;
Xing, Weijia;
Yang, Juan;
Liao, Qiaohong;
Cowling, Benjamin J.;
Yang, Bingyi;
Lau, Eric H. Y.;
Takahashi, Saki;
Farrar, Jeremy J.;
Grenfell, Bryan T.;
Leung, Gabriel M.;
Yu, Hongjie

Publication type:

journal article

Hand, Foot, and Mouth Disease in China: Modeling Epidemic Dynamics of Enterovirus Serotypes and Implications for Vaccination.

Published in:

2016

By:

Takahashi, Saki;
Liao, Qiaohong;
Van Boeckel, Thomas P.;
Xing, Weijia;
Sun, Junling;
Hsiao, Victor Y.;
Metcalf, C. Jessica E.;
Chang, Zhaorui;
Liu, Fengfeng;
Zhang, Jing;
Wu, Joseph T.;
Cowling, Benjamin J.;
Leung, Gabriel M.;
Farrar, Jeremy J.;
van Doorn, H. Rogier;
Grenfell, Bryan T.;
Yu, Hongjie

Publication type:

journal article

Measuring the performance of vaccination programs using cross-sectional surveys: a likelihood framework and retrospective analysis.

Published in:

2011

By:

Lessler, Justin;
Metcalf, C. Jessica E.;
Grais, Rebecca F.;
Luquero, Francisco J.;
Cummings, Derek A. T.;
Grenfell, Bryan T.

Publication type:

journal article

Air Travel and the Spread of Influenza: Important Caveats.

Published in:

2006

By:

Viboud, Cécile;
Miller, Mark A.;
Grenfell, Bryan T.;
Bjørnstad, Ottar N.;
Simonsen, Lone

Publication type:

Letter

Tensor decomposition for infectious disease incidence data.

Published in:

Methods in Ecology & Evolution, 2020, v. 11, n. 12, p. 1690, doi. 10.1111/2041-210X.13480

By:

Korevaar, Hannah;
Metcalf, C. Jessica;
Grenfell, Bryan T.;
Freckleton, Robert

Publication type:

Article

Bacillus Calmette-Guérin and Isoniazid Preventive Therapy Protect Contacts of Patients with Tuberculosis.

Published in:

American Journal of Respiratory & Critical Care Medicine, 2014, v. 189, n. 7, p. 853, doi. 10.1164/rccm.201310-1896OC

By:

Zelner, Jonathan L.;
Murray, Megan B.;
Becerra, Mercedes C.;
Galea, Jerome;
Lecca, Leonid;
Calderon, Roger;
Yataco, Rosa;
Contreras, Carmen;
Zibiao Zhang;
Grenfell, Bryan T.;
Cohen, Ted

Publication type:

Article

Spatial Transmission of 2009 Pandemic Influenza in the US.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 6, p. 1, doi. 10.1371/journal.pcbi.1003635

By:

Gog, Julia R.;
Ballesteros, Sébastien;
Viboud, Cécile;
Simonsen, Lone;
Bjornstad, Ottar N.;
Shaman, Jeffrey;
Chao, Dennis L.;
Khan, Farid;
Grenfell, Bryan T.

Publication type:

Article

Discovering the Phylodynamics of RNA Viruses.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 10, p. 1, doi. 10.1371/journal.pcbi.1000505

By:

Holmes, Edward C.;
Grenfell, Bryan T.

Publication type:

Article

Discovering the Phylodynamics of RNA Viruses.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000505

By:

Holmes, Edward C.;
Grenfell, Bryan T.

Publication type:

Article

Seasonality, stochasticity and population cycles.

Published in:

Population Ecology, 1998, v. 40, n. 1, p. 141, doi. 10.1007/BF02765232

By:

Grenfell, Bryan T.;
Finkenstädt, Bärbel F.

Publication type:

Article

Integrating immune mechanisms to model nematode worm burden: an example in sheep.

Published in:

Parasitology, 2016, v. 143, n. 7, p. 894, doi. 10.1017/S0031182015000992

By:

Fenton, Andy;
GARNIER, ROMAIN;
GRENFELL, BRYAN T.;
NISBET, ALASDAIR J.;
MATTHEWS, JACQUELINE B.;
GRAHAM, ANDREA L.

Publication type:

Article

Semiparametric estimation of the duration of immunity from infectious disease time series: influenza as a case-study.

Published in:

Journal of the Royal Statistical Society: Series C (Applied Statistics), 2005, v. 54, n. 3, p. 659, doi. 10.1111/j.1467-9876.2005.05383.x

By:

Yingcun Xia;
Gog, Julia R.;
Grenfell, Bryan T.

Publication type:

Article

Modeling the Impact of Interventions Along the HIV Continuum of Care in Newark, New Jersey.

Published in:

Clinical Infectious Diseases, 2014, v. 58, n. 2, p. 274, doi. 10.1093/cid/cit687

By:

Birger, Ruthie B.;
Hallett, Timothy B.;
Sinha, Anushua;
Grenfell, Bryan T.;
Hodder, Sally L.

Publication type:

Article

Topographic determinants of foot and mouth disease transmission in the UK 2001 epidemic.

Published in:

BMC Veterinary Research, 2006, v. 2, p. 1

By:

Savill, Nicholas J.;
Shaw, Darren J.;
Deardon, Rob;
Tildesley, Michael J.;
Keeling, Matthew J.;
Woolhouse, Mark E. J.;
Brooks, Stephen P.;
Grenfell, Bryan T.

Publication type:

Article

Assessing the Effects of Measles Virus Infections on Childhood Infectious Disease Mortality in Brazil.

Published in:

Journal of Infectious Diseases, 2023, v. 227, n. 1, p. 133, doi. 10.1093/infdis/jiac233

By:

Xia, Siyang;
Gullickson, Cricket C;
Metcalf, C Jessica E;
Grenfell, Bryan T;
Mina, Michael J

Publication type:

Article

Cyclical changes in seroprevalence of leptospirosis in California sea lions: endemic and epidemic disease in one host species?

Published in:

BMC Infectious Diseases, 2007, v. 7, n. 1, p. 125, doi. 10.1186/1471-2334-7-125

By:

Lloyd-Smith, James O.;
Greig, Denise J.;
Hietala, Sharon;
Ghneim, George S.;
Palmer, Lauren;
St. Leger, Judy;
Grenfell, Bryan T.;
Gulland, Frances M. D.

Publication type:

Article

Disentangling the dynamical underpinnings of differences in SARS-CoV-2 pathology using within-host ecological models.

Published in:

2020

By:

Metcalf, C. Jessica E.;
Grenfell, Bryan T.;
Graham, Andrea L.

Publication type:

Literature Review

Epidemic dynamics of respiratory syncytial virus in current and future climates.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-13562-y

By:

Baker, Rachel E.;
Mahmud, Ayesha S.;
Wagner, Caroline E.;
Wenchang Yang;
Pitzer, Virginia E.;
Viboud, Cecile;
Vecchi, Gabriel A.;
Metcalf, C. Jessica E.;
Grenfell, Bryan T.

Publication type:

Article

Pareto rules for malaria super-spreaders and super-spreading.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11861-y

By:

Cooper, Laura;
Kang, Su Yun;
Bisanzio, Donal;
Maxwell, Kilama;
Rodriguez-Barraquer, Isabel;
Greenhouse, Bryan;
Drakeley, Chris;
Arinaitwe, Emmanuel;
G. Staedke, Sarah;
Gething, Peter W.;
Eckhoff, Philip;
Reiner, Robert C.;
Hay, Simon I.;
Dorsey, Grant;
Kamya, Moses R.;
Lindsay, Steven W.;
Grenfell, Bryan T.;
Smith, David L.

Publication type:

Article

The decline of malaria in Vietnam, 1991–2014.

Published in:

Malaria Journal, 2018, v. 17, n. 1, p. N.PAG, doi. 10.1186/s12936-018-2372-8

By:

Goldlust, Sandra M.;
Thuan, Phung Duc;
Giang, Dang Duy Hoang;
Thang, Ngo Duc;
Thwaites, Guy E.;
Farrar, Jeremy;
Thanh, Ngo Viet;
Nguyen, Tran Dang;
Grenfell, Bryan T.;
Boni, Maciej F.;
Hien, Tran Tinh

Publication type:

Article

Modeling the measles paradox reveals the importance of cellular immunity in regulating viral clearance.

Published in:

PLoS Pathogens, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.ppat.1007493

By:

Morris, Sinead E.;
Yates, Andrew J.;
de Swart, Rik L.;
de Vries, Rory D.;
Mina, Michael J.;
Nelson, Ashley N.;
Lin, Wen-Hsuan W.;
Kouyos, Roger D.;
Griffin, Diane E.;
Grenfell, Bryan T.

Publication type:

Article

Human mobility and the spatial transmission of influenza in the United States.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 2, p. 1, doi. 10.1371/journal.pcbi.1005382

By:

Charu, Vivek;
Zeger, Scott;
Gog, Julia;
Bjørnstad, Ottar N.;
Kissler, Stephen;
Simonsen, Lone;
Grenfell, Bryan T.;
Viboud, Cécile

Publication type:

Article

Universal or Specific? A Modeling-Based Comparison of Broad-Spectrum Influenza Vaccines against Conventional, Strain-Matched Vaccines.

Published in:

PLoS Computational Biology, 2016, v. 12, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005204

By:

Subramanian, Rahul;
Graham, Andrea L.;
Grenfell, Bryan T.;
Arinaminpathy, Nimalan

Publication type:

Article

Persistent Chaos of Measles Epidemics in the Prevaccination United States Caused by a Small Change in Seasonal Transmission Patterns.

Published in:

PLoS Computational Biology, 2016, v. 12, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004655

By:

Dalziel, Benjamin D.;
Bjørnstad, Ottar N.;
van Panhuis, Willem G.;
Burke, Donald S.;
Metcalf, C. Jessica E.;
Grenfell, Bryan T.

Publication type:

Article

Epidemiological dynamics of enterovirus D68 in the United States and implications for acute flaccid myelitis.

Published in:

Science Translational Medicine, 2021, v. 13, n. 584, p. 1, doi. 10.1126/scitranslmed.abd2400

By:

Park, Sang Woo;
Pons-Salort, Margarita;
Messacar, Kevin;
Cook, Camille;
Meyers, Lindsay;
Farrar, Jeremy;
Grenfell, Bryan T.

Publication type:

Article

Unreported cases in the 2014-2016 Ebola epidemic: Spatiotemporal variation, and implications for estimating transmission.

Published in:

PLoS Neglected Tropical Diseases, 2018, v. 12, n. 1, p. 1, doi. 10.1371/journal.pntd.0006161

By:

Dalziel, Benjamin D.;
Lau, Max S. Y.;
Tiffany, Amanda;
McClelland, Amanda;
Zelner, Jon;
Bliss, Jessica R.;
Grenfell, Bryan T.

Publication type:

Article

The impact of migration and antimicrobial resistance on the transmission dynamics of typhoid fever in Kathmandu, Nepal: A mathematical modelling study.

Published in:

PLoS Neglected Tropical Diseases, 2017, v. 11, n. 5, p. 1, doi. 10.1371/journal.pntd.0005547

By:

Saad, Neil J.;
Bowles, Cayley C.;
Grenfell, Bryan T.;
Basnyat, Buddha;
Arjyal, Amit;
Dongol, Sabina;
Karkey, Abhilasha;
Baker, Stephen;
Pitzer, Virginia E.

Publication type:

Article

Analysis of multi-level spatial data reveals strong synchrony in seasonal influenza epidemics across Norway, Sweden, and Denmark.

Published in:

PLoS ONE, 2018, v. 13, n. 5, p. 1, doi. 10.1371/journal.pone.0197519

By:

Morris, Sinead E.;
Freiesleben de Blasio, Birgitte;
Viboud, Cécile;
Wesolowski, Amy;
Bjørnstad, Ottar N.;
Grenfell, Bryan T.

Publication type:

Article

tsiR: An R package for time-series Susceptible-Infected-Recovered models of epidemics.

Published in:

PLoS ONE, 2017, v. 12, n. 9, p. 1, doi. 10.1371/journal.pone.0185528

By:

Becker, Alexander D.;
Grenfell, Bryan T.

Publication type:

Article

The impact of HCV therapy in a high HIV-HCV prevalence population: A modeling study on people who inject drugs in Ho Chi Minh City, Vietnam.

Published in:

PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0177195

By:

Birger, Ruthie B.;
Le, Thuy;
Kouyos, Roger D.;
Grenfell, Bryan T.;
Hallett, Timothy B.

Publication type:

Article

Age-Specific Risks of Tuberculosis Infection From Household and Community Exposures and Opportunities for Interventions in a High-Burden Setting.

Published in:

American Journal of Epidemiology, 2014, v. 180, n. 8, p. 853, doi. 10.1093/aje/kwu192

By:

Zelner, Jonathan L.;
Murray, Megan B.;
Becerra, Mercedes C.;
Galea, Jerome;
Lecca, Leonid;
Calderon, Roger;
Yataco, Rosa;
Contreras, Carmen;
Zhang, Zibiao;
Grenfell, Bryan T.;
Cohen, Ted

Publication type:

Article

Spatial variation of Anopheles-transmitted Wuchereria bancrofti and Plasmodium falciparum infection densities in Papua New Guinea.

Published in:

Filaria Journal, 2003, v. 2, p. 1

By:

Alexander, Neal D.;
Moyeed, Rana A.;
Hyun, Phil J.;
Dimber, Zachary B.;
Bockarie, Moses J.;
Stander, Julian;
Grenfell, Bryan T.;
Kazura, James W.;
Alpers, Michael P.

Publication type:

Article

Long-term dynamics of measles in London: Titrating the impact of wars, the 1918 pandemic, and vaccination.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 9, p. 1, doi. 10.1371/journal.pcbi.1007305

By:

Becker, Alexander D.;
Wesolowski, Amy;
Bjørnstad, Ottar N.;
Grenfell, Bryan T.

Publication type:

Article

Model diagnostics and refinement for phylodynamic models.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 4, p. 1, doi. 10.1371/journal.pcbi.1006955

By:

Lau, Max SY;
Grenfell, Bryan T;
Worby, Colin J;
Gibson, Gavin J

Publication type:

Article

Direct and indirect mortality impacts of the COVID-19 pandemic in the United States, March 1, 2020 to January 1, 2022.

Published in:

eLife, 2023, p. 1, doi. 10.7554/eLife.77562

By:

Wha-Eum Lee;
Sang Woo Park;
Weinberger, Daniel M.;
Olson, Donald;
Simonsen, Lone;
Grenfell, Bryan T.;
Viboud, Cécile

Publication type:

Article