Works by Gorshkov, Mikhail V.

Results: 27

Comparative evaluation of label-free quantification methods for shotgun proteomics.
Published in:
Rapid Communications in Mass Spectrometry: RCM, 2017, v. 31, n. 7, p. 606, doi. 10.1002/rcm.7829
By:
- Bubis, Julia A.;
- Levitsky, Lev I.;
- Ivanov, Mark V.;
- Tarasova, Irina A.;
- Gorshkov, Mikhail V.
Publication type:
Article
Threonine versus isothreonine in synthetic peptides analyzed by high-resolution liquid chromatography/tandemmass spectrometry.
Published in:
Rapid Communications in Mass Spectrometry: RCM, 2016, v. 30, n. 11, p. 1323, doi. 10.1002/rcm.7566
By:
- Kuznetsova, Ksenia G.;
- Trufanov, Pavel V.;
- Moysa, Alexander A.;
- Pyatnitskiy, Mikhail A.;
- Zgoda, Viktor G.;
- Gorshkov, Mikhail V.;
- Moshkovskii, Sergei A.
Publication type:
Article
Combination of Edman degradation of peptides with liquid chromatography/mass spectrometry workflow for peptide identification in bottom-up proteomics.
Published in:
Rapid Communications in Mass Spectrometry: RCM, 2013, v. 27, n. 3, p. 391, doi. 10.1002/rcm.6462
By:
- Lobas, Anna A.;
- Verenchikov, Anatoly N.;
- Goloborodko, Anton A.;
- Levitsky, Lev I.;
- Gorshkov, Mikhail V.
Publication type:
Article
Observation of ion coalescence in Orbitrap Fourier transform mass spectrometry.
Published in:
Rapid Communications in Mass Spectrometry: RCM, 2012, v. 26, n. 15, p. 1711, doi. 10.1002/rcm.6289
By:
- Gorshkov, Mikhail V.;
- Fornelli, Luca;
- Tsybin, Yury O.
Publication type:
Article
Empirical approach to false discovery rate estimation in shotgun proteomics.
Published in:
Rapid Communications in Mass Spectrometry: RCM, 2010, v. 24, n. 4, p. 454, doi. 10.1002/rcm.4417
By:
- Goloborodko, Anton A.;
- Mayerhofer, Corina;
- Zubarev, Alexander R.;
- Tarasova, Irina A.;
- Gorshkov, Alexander V.;
- Zubarev, Roman A.;
- Gorshkov, Mikhail V.
Publication type:
Article
Ultrafast Proteomics.
Published in:
Biochemistry (00062979), 2024, v. 89, n. 8, p. 1349, doi. 10.1134/S0006297924080017
By:
- Fedorov, Ivan I.;
- Protasov, Sergey A.;
- Tarasova, Irina A.;
- Gorshkov, Mikhail V.
Publication type:
Article
On the Feasibility of Using an Ultra-Fast DirectMS1 Method of Proteome-Wide Analysis for Searching Drug Targets in Chemical Proteomics.
Published in:
Biochemistry (00062979), 2022, v. 87, n. 11, p. 1342, doi. 10.1134/S000629792211013X
By:
- Solovyeva, Elizaveta M.;
- Bubis, Julia A.;
- Tarasova, Irina A.;
- Lobas, Anna A.;
- Ivanov, Mark V.;
- Nazarov, Alexey A.;
- Shutkov, Ilya A.;
- Gorshkov, Mikhail V.
Publication type:
Article
Mass Spectrometry-Based Chemical Proteomics for Drug Target Discoveries.
Published in:
Biochemistry (00062979), 2022, v. 87, n. 9, p. 983, doi. 10.1134/S0006297922090103
By:
- Fedorov, Ivan I.;
- Lineva, Victoria I.;
- Tarasova, Irina A.;
- Gorshkov, Mikhail V.
Publication type:
Article
Proteomics of Cellular Response to Stress: Taking Control of False Positive Results.
Published in:
Biochemistry (00062979), 2021, v. 86, n. 3, p. 338, doi. 10.1134/S0006297921030093
By:
- Gabdrakhmanov, Ildar T.;
- Gorshkov, Mikhail V.;
- Tarasova, Irina A.
Publication type:
Article
On the utility of ultrafast MS1-only proteomics in drug target discovery studies based on thermal proteome profiling method.
Published in:
Analytical & Bioanalytical Chemistry, 2024, v. 416, n. 18, p. 4083, doi. 10.1007/s00216-024-05330-9
By:
- Fedorov, Ivan I.;
- Bubis, Julia A.;
- Kazakova, Elizaveta M.;
- Lobas, Anna A.;
- Ivanov, Mark V.;
- Emekeeva, Daria D.;
- Tarasova, Irina A.;
- Nazarov, Alexey A.;
- Gorshkov, Mikhail V.
Publication type:
Article
Depletion of human serum albumin in embryo culture media for in vitro fertilization using monolithic columns with immobilized antibodies.
Published in:
Electrophoresis, 2016, v. 37, n. 17/18, p. 2322, doi. 10.1002/elps.201500489
By:
- Tarasova, Irina A.;
- Lobas, Anna A.;
- Černigoj, Urh;
- Solovyeva, Elizaveta M.;
- Mahlberg, Barbara;
- Ivanov, Mark V.;
- Panić‐Janković, Tanja;
- Nagy, Zoltan;
- Pridatchenko, Marina L.;
- Pungor, Andras;
- Nemec, Blaž;
- Vidic, Urška;
- Gašperšič, Jernej;
- Krajnc, Nika Lendero;
- Vidič, Jana;
- Gorshkov, Mikhail V.;
- Mitulović, Goran
Publication type:
Article
Sequence-specific predictive chromatography to assist mass spectrometric analysis of asparagine deamidation and aspartate isomerization in peptides.
Published in:
Electrophoresis, 2011, v. 32, n. 15, p. 1962, doi. 10.1002/elps.201000507
By:
- Sargaeva, Nadezda P.;
- Goloborodko, Anton A.;
- O'Connor, Peter B.;
- Moskovets, Eugene;
- Gorshkov, Mikhail V.
Publication type:
Article
Adenosine‐to‐Inosine RNA Editing in Mouse and Human Brain Proteomes.
Published in:
Proteomics, 2019, v. 19, n. 23, p. N.PAG, doi. 10.1002/pmic.201900195
By:
- Levitsky, Lev I.;
- Kliuchnikova, Anna A.;
- Kuznetsova, Ksenia G.;
- Karpov, Dmitry S.;
- Ivanov, Mark V.;
- Pyatnitskiy, Mikhail A.;
- Kalinina, Olga V.;
- Gorshkov, Mikhail V.;
- Moshkovskii, Sergei A.
Publication type:
Article
Scavager: A Versatile Postsearch Validation Algorithm for Shotgun Proteomics Based on Gradient Boosting.
Published in:
Proteomics, 2019, v. 19, n. 3, p. N.PAG, doi. 10.1002/pmic.201800280
By:
- Ivanov, Mark V.;
- Levitsky, Lev I.;
- Bubis, Julia A.;
- Gorshkov, Mikhail V.
Publication type:
Article
Validation of Peptide Identification Results in Proteomics Using Amino Acid Counting.
Published in:
Proteomics, 2018, v. 18, n. 23, p. N.PAG, doi. 10.1002/pmic.201800117
By:
- Bubis, Julia A.;
- Levitsky, Lev I.;
- Ivanov, Mark V.;
- Gorshkov, Mikhail V.
Publication type:
Article
Exome-based proteogenomics of HEK-293 human cell line: Coding genomic variants identified at the level of shotgun proteome.
Published in:
Proteomics, 2016, v. 16, n. 14, p. 1980, doi. 10.1002/pmic.201500349
By:
- Lobas, Anna A.;
- Karpov, Dmitry S.;
- Kopylov, Arthur T.;
- Solovyeva, Elizaveta M.;
- Ivanov, Mark V.;
- Ilina, Irina Y.;
- Lazarev, Vassily N.;
- Kuznetsova, Ksenia G.;
- Ilgisonis, Ekaterina V.;
- Zgoda, Victor G.;
- Gorshkov, Mikhail V.;
- Moshkovskii, Sergei A.
Publication type:
Article
Retention time prediction using the model of liquid chromatography of biomacromolecules at critical conditions in LC-MS phosphopeptide analysis.
Published in:
Proteomics, 2010, v. 10, n. 19, p. 3458, doi. 10.1002/pmic.200900837
By:
- Perlova, Tatiana Yu;
- Goloborodko, Anton A.;
- Margolin, Yelena;
- Pridatchenko, Marina L.;
- Tarasova, Irina A.;
- Gorshkov, Alexander V.;
- Moskovets, Eugene;
- Ivanov, Alexander R.;
- Gorshkov, Mikhail V.
Publication type:
Article
Enhancing the Cytotoxic Activity of Anticancer Pt<sup>IV</sup> Complexes by Introduction of Lonidamine as an Axial Ligand.
Published in:
European Journal of Inorganic Chemistry, 2017, v. 2017, n. 12, p. 1785, doi. 10.1002/ejic.201600857
By:
- Nosova, Yulia N.;
- Foteeva, Lidia S.;
- Zenin, Ilia V.;
- Fetisov, Timur I.;
- Kirsanov, Kirill I.;
- Yakubovskaya, Marianna G.;
- Antonenko, Taisya A.;
- Tafeenko, Viktor A.;
- Aslanov, Leonid A.;
- Lobas, Anna A.;
- Gorshkov, Mikhail V.;
- Galanski, Markus;
- Keppler, Bernhard K.;
- Timerbaev, Andrei R.;
- Milaeva, Elena R.;
- Nazarov, Alexey A.
Publication type:
Article
On the excessive use of coefficient of variation as a metric of quantitation quality in proteomics.
Published in:
Proteomics, 2024, v. 24, n. 1, p. 1, doi. 10.1002/pmic.202300090
By:
- Ivanov, Mark V.;
- Garibova, Leyla A.;
- Postoenko, Valeriy I.;
- Levitsky, Lev I.;
- Gorshkov, Mikhail V.
Publication type:
Article
Proteomics‐based scoring of cellular response to stimuli for improved characterization of signaling pathway activity.
Published in:
Proteomics, 2023, v. 23, n. 5, p. 1, doi. 10.1002/pmic.202200275
By:
- Kazakova, Elizaveta M.;
- Solovyeva, Elizaveta M.;
- Levitsky, Lev I.;
- Bubis, Julia A.;
- Emekeeva, Daria D.;
- Antonets, Anastasia A.;
- Nazarov, Alexey A.;
- Gorshkov, Mikhail V.;
- Tarasova, Irina A.
Publication type:
Article
Identification of Alternative Splicing in Proteomes of Human Melanoma Cell Lines without RNA Sequencing Data.
Published in:
International Journal of Molecular Sciences, 2023, v. 24, n. 3, p. 2466, doi. 10.3390/ijms24032466
By:
- Lobas, Anna A.;
- Solovyeva, Elizaveta M.;
- Levitsky, Lev I.;
- Goncharov, Anton O.;
- Lyssuk, Elena Y.;
- Larin, Sergey S.;
- Moshkovskii, Sergei A.;
- Gorshkov, Mikhail V.
Publication type:
Article
Multiomic Profiling Identified EGF Receptor Signaling as a Potential Inhibitor of Type I Interferon Response in Models of Oncolytic Therapy by Vesicular Stomatitis Virus.
Published in:
International Journal of Molecular Sciences, 2022, v. 23, n. 9, p. 5244, doi. 10.3390/ijms23095244
By:
- Nikitina, Anastasia S.;
- Lipatova, Anastasia V.;
- Goncharov, Anton O.;
- Kliuchnikova, Anna A.;
- Pyatnitskiy, Mikhail A.;
- Kuznetsova, Ksenia G.;
- Hamad, Azzam;
- Vorobyev, Pavel O.;
- Alekseeva, Olga N.;
- Mahmoud, Marah;
- Shakiba, Yasmin;
- Anufrieva, Ksenia S.;
- Arapidi, Georgy P.;
- Ivanov, Mark V.;
- Tarasova, Irina A.;
- Gorshkov, Mikhail V.;
- Chumakov, Peter M.;
- Moshkovskii, Sergei A.
Publication type:
Article
Limitation of predictive 2- D liquid chromatography in reducing the database search space in shotgun proteomics: In silico studies.
Published in:
Journal of Separation Science, 2012, v. 35, n. 14, p. 1771, doi. 10.1002/jssc.201100798
By:
- Moskovets, Eugene;
- Goloborodko, Anton A.;
- Gorshkov, Alexander V.;
- Gorshkov, Mikhail V.
Publication type:
Article
FractionOptimizer: a method for optimal peptide fractionation in bottom-up proteomics.
Published in:
Analytical & Bioanalytical Chemistry, 2018, v. 410, n. 16, p. 3827, doi. 10.1007/s00216-018-1054-2
By:
- Solovyeva, Elizaveta M.;
- Lobas, Anna A.;
- Kopylov, Arthur T.;
- Ilina, Irina Y.;
- Levitsky, Lev I.;
- Moshkovskii, Sergei A.;
- Gorshkov, Mikhail V.
Publication type:
Article
Multi-Omics Analysis of Glioblastoma Cells' Sensitivity to Oncolytic Viruses.
Published in:
Cancers, 2021, v. 13, n. 21, p. 5268, doi. 10.3390/cancers13215268
By:
- Lipatova, Anastasiya V.;
- Soboleva, Alesya V.;
- Gorshkov, Vladimir A.;
- Bubis, Julia A.;
- Solovyeva, Elizaveta M.;
- Krasnov, George S.;
- Kochetkov, Dmitry V.;
- Vorobyev, Pavel O.;
- Ilina, Irina Y.;
- Moshkovskii, Sergei A.;
- Kjeldsen, Frank;
- Gorshkov, Mikhail V.;
- Chumakov, Peter M.;
- Tarasova, Irina A.
Publication type:
Article
Influence of the Number of Axial Bexarotene Ligands on the Cytotoxicity of Pt(IV) Analogs of Oxaliplatin.
Published in:
Bioinorganic Chemistry & Applications, 2017, p. 1, doi. 10.1155/2017/4736321
By:
- Nosova, Yulia N.;
- Zenin, Ilia V.;
- Milaeva, Elena R.;
- Nazarov, Alexey A.;
- Maximova, Varvara P.;
- Zhidkova, Ekaterina M.;
- Kirsanov, Kirill I.;
- Lesovaya, Ekaterina A.;
- Lobas, Anna A.;
- Gorshkov, Mikhail V.;
- Kovaleva, Olga N.;
- Galanski, Markus;
- Keppler, Bernhard K.
Publication type:
Article
Rpn4 and proteasome-mediated yeast resistance to ethanol includes regulation of autophagy.
Published in:
Applied Microbiology & Biotechnology, 2020, v. 104, n. 9, p. 4027, doi. 10.1007/s00253-020-10518-x
By:
- Bubis, Julia A.;
- Spasskaya, Daria S.;
- Gorshkov, Vladimir A.;
- Kjeldsen, Frank;
- Kofanova, Aleksandra M.;
- Lekanov, Dmitry S.;
- Gorshkov, Mikhail V.;
- Karpov, Vadim L.;
- Tarasova, Irina A.;
- Karpov, Dmitry S.
Publication type:
Article