Works by Gordon, Paul M. K.

Results: 18

Disease-specific motifs can be identified in circulating nucleic acids from live elk and cattle infected with transmissible spongiform encephalopathies.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 2, p. 550, doi. 10.1093/nar/gkn963

By:

Gordon, Paul M. K.;
Schütz, Ekkehard;
Beck, Julia;
Urnovitz, Howard B.;
Graham, Catherine;
Clark, Renee;
Dudas, Sandor;
Czub, Stefanie;
Sensen, Maria;
Brenig, Bertram;
Groschup, Martin H.;
Church, Robert B.;
Sensen, Christoph W.

Publication type:

Article

Osprey: a comprehensive tool employing novel methods for the design of oligonucleotides for DNA sequencing and microarrays.

Published in:

Nucleic Acids Research, 2004, v. 32, n. 17, p. e133, doi. 10.1093/nar/gnh127

By:

Gordon, Paul M. K.;
Sensen, Christoph W.

Publication type:

Article

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows.

Published in:

Journal of Biomedical Semantics, 2010, v. 1, n. 1, p. 1, doi. 10.1186/2041-1480-1-8

By:

Katayama, Toshiaki;
Arakawa, Kazuharu;
Nakao, Mitsuteru;
Ono, Keiichiro;
Aoki-Kinoshita, Kiyoko F.;
Yamamoto, Yasunori;
Yamaguchi, Atsuko;
Kawashima, Shuichi;
Chun, Hong-Woo;
Aerts, Jan;
Aranda, Bruno;
Barboza, Lord Hendrix;
Bonnal, Raoul J. P.;
Bruskiewich, Richard;
Bryne, Jan C.;
Fernández, José M.;
Funahashi, Akira;
Gordon, Paul M. K.;
Goto, Naohisa;
Groscurth, Andreas

Publication type:

Article

Rapid-Onset Obesity with Hypothalamic Dysfunction, Hypoventilation, and Autonomic Dysregulation (ROHHAD): exome sequencing of trios, monozygotic twins and tumours.

Published in:

Orphanet Journal of Rare Diseases, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s13023-015-0314-x

By:

Barclay, Sarah F.;
Rand, Casey M.;
Borch, Lauren A.;
Nguyen, Lisa;
Gray, Paul A.;
Gibson, William T.;
Wilson, Richard J. A.;
Gordon, Paul M. K.;
Aung, Zaw;
Berry-Kravis, Elizabeth M.;
Ize-Ludlow, Diego;
Weese-Mayer, Debra E.;
Bech-Hansen, N. Torben

Publication type:

Article

Rapid-Onset Obesity with Hypothalamic Dysfunction, Hypoventilation, and Autonomic Dysregulation (ROHHAD): exome sequencing of trios, monozygotic twins and tumours.

Published in:

2015

By:

Barclay, Sarah F;
Rand, Casey M;
Borch, Lauren A;
Nguyen, Lisa;
Gray, Paul A;
Gibson, William T;
Wilson, Richard J A;
Gordon, Paul M K;
Aung, Zaw;
Berry-Kravis, Elizabeth M;
Ize-Ludlow, Diego;
Weese-Mayer, Debra E;
Bech-Hansen, N Torben

Publication type:

journal article

Gene transcript and metabolite profiling of elicitor-induced opium poppy cell cultures reveals the coordinate regulation of primary and secondary metabolism.

Published in:

Planta: An International Journal of Plant Biology, 2007, v. 225, n. 5, p. 1085, doi. 10.1007/s00425-006-0419-5

By:

Zulak, Katherine G.;
Cornish, Anthony;
Daskalchuk, Timothy E.;
Deyholos, Michael K.;
Goodenowe, Dayan B.;
Gordon, Paul M. K.;
Klassen, Darren;
Pelcher, Lawrence E.;
Sensen, Christoph W.;
Facchini, Peter J.

Publication type:

Article

Transgenic mice overexpressing desmocollin-2 (DSC2) develop cardiomyopathy associated with myocardial inflammation and fibrotic remodeling.

Published in:

PLoS ONE, 2017, v. 12, n. 3, p. 1, doi. 10.1371/journal.pone.0174019

By:

Brodehl, Andreas;
Belke, Darrell D.;
Garnett, Lauren;
Martens, Kristina;
Abdelfatah, Nelly;
Rodriguez, Marcela;
Diao, Catherine;
Chen, Yong-Xiang;
Gordon, Paul M. K.;
Nygren, Anders;
Gerull, Brenda

Publication type:

Article

A shared core microbiome in soda lakes separated by large distances.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-12195-5

By:

Zorz, Jackie K.;
Sharp, Christine;
Kleiner, Manuel;
Gordon, Paul M. K.;
Pon, Richard T.;
Dong, Xiaoli;
Strous, Marc

Publication type:

Article

Optimizing genotype quality metrics for individual exomes and cohort analysis.

Published in:

2012

By:

Gordon, Paul M. K.;
Dimnik, Leo;
Lamont, Ryan;
Innes, Micheil;
Bernier, Francois;
Parboosingh, Jillian

Publication type:

Abstract

Tissue-selective alternate promoters guide NLRP6 expression.

Published in:

Life Science Alliance, 2021, v. 4, n. 3, p. 1, doi. 10.26508/lsa.202000897

By:

Bracey, Nathan A.;
Platnich, Jaye M.;
Lau, Arthur;
Hyunjae Chung;
Hyndman, M. Eric;
MacDonald, Justin A.;
Chun, Justin;
Beck, Paul L.;
Girardin, Stephen E.;
Gordon, Paul M. K.;
Muruve, Daniel A.

Publication type:

Article

SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-229

By:

Reid, Ian;
O'Toole, Nicholas;
Zabaneh, Omar;
Nourzadeh, Reza;
Dahdouli, Mahmoud;
Abdellateef, Mostafa;
Gordon, Paul M. K.;
Soh, Jung;
Butler, Gregory;
Sensen, Christoph W.;
Tsang, Adrian

Publication type:

Article

Reconstructing SARS-CoV-2 infection dynamics through the phylogenetic inference of unsampled sources of infection.

Published in:

PLoS ONE, 2021, v. 16, n. 12, p. 1, doi. 10.1371/journal.pone.0261422

By:

Perera, Deshan;
Perks, Ben;
Potemkin, Michael;
Liu, Andy;
Gordon, Paul M. K.;
Gill, M. John;
Long, Quan;
van Marle, Guido

Publication type:

Article

Evaluating the effectiveness of ensemble voting in improving the accuracy of consensus signals produced by various DTWA algorithms from step-current signals generated during nanopore sequencing.

Published in:

PLoS Computational Biology, 2021, v. 17, n. 9, p. 1, doi. 10.1371/journal.pcbi.1009350

By:

Smith, Michael;
Chan, Rachel;
Khurram, Maaz;
Gordon, Paul M. K.

Publication type:

Article

Stirred suspension bioreactors maintain naïve pluripotency of human pluripotent stem cells.

Published in:

Communications Biology, 2020, v. 3, n. 1, p. N.PAG, doi. 10.1038/s42003-020-01218-3

By:

Rohani, Leili;
Borys, Breanna S.;
Razian, Golsa;
Naghsh, Pooyan;
Liu, Shiying;
Johnson, Adiv A.;
Machiraju, Pranav;
Holland, Heidrun;
Lewis, Ian A.;
Groves, Ryan A.;
Toms, Derek;
Gordon, Paul M. K.;
Li, Joyce W.;
So, Tania;
Dang, Tiffany;
Kallos, Michael S.;
Rancourt, Derrick E.

Publication type:

Article

Glucocorticoid-driven transcriptomes in human airway epithelial cells: commonalities, differences and functional insight from cell lines and primary cells.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-018-0467-2

By:

Mostafa, Mahmoud M.;
Rider, Christopher F.;
Shah, Suharsh;
Traves, Suzanne L.;
Gordon, Paul M. K.;
Miller-Larsson, Anna;
Leigh, Richard;
Newton, Robert

Publication type:

Article

An expression-directed linear mixed model discovering low-effect genetic variants.

Published in:

Genetics, 2024, v. 226, n. 4, p. 1, doi. 10.1093/genetics/iyae018

By:

Li, Qing;
Bian, Jiayi;
Qian, Yanzhao;
Kossinna, Pathum;
Gau, Cooper;
Gordon, Paul M K;
Zhou, Xiang;
Guo, Xingyi;
Yan, Jun;
Wu, Jingjing;
Long, Quan

Publication type:

Article

Interspecies data mining to predict novel ING-protein interactions in human.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-426

By:

Gordon, Paul M. K.;
Soliman, Mohamed A.;
Bose, Pinaki;
Quang Trinh;
Sensen, Christoph W.;
Riabowol, Karl

Publication type:

Article

Oxford nanopore sequencing in clinical microbiology and infection diagnostics.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 5, p. 1, doi. 10.1093/bib/bbaa403

By:

Sheka, Dropen;
Alabi, Nikolay;
Gordon, Paul M K

Publication type:

Article