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Comparative genomics of the closely related fungal genera Cryptococcus and Kwoniella reveals karyotype dynamics and suggests evolutionary mechanisms of pathogenesis.
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- PLoS Biology, 2024, v. 22, n. 6, p. 1, doi. 10.1371/journal.pbio.3002682
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- Article
A rapid, low-cost, and highly sensitive SARS-CoV-2 diagnostic based on whole-genome sequencing.
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- PLoS ONE, 2023, v. 18, n. 11, p. 1, doi. 10.1371/journal.pone.0294283
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- Article
Smart-RRBS for single-cell methylome and transcriptome analysis.
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- Nature Protocols, 2021, v. 16, n. 8, p. 4004, doi. 10.1038/s41596-021-00571-9
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- Article
Corrupted coordination of epigenetic modifications leads to diverging chromatin states and transcriptional heterogeneity in CLL.
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- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09645-5
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- Article
Genome-wide tracking of dCas9-methyltransferase footprints.
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- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02708-5
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- Article
Targeted bisulfite sequencing of the dynamic DNA methylome.
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- Epigenetics & Chromatin, 2016, v. 9, p. 1, doi. 10.1186/s13072-016-0105-1
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- Article
Targeted disruption of DNMT1, DNMT3A and DNMT3B in human embryonic stem cells.
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- Nature Genetics, 2015, v. 47, n. 5, p. 469, doi. 10.1038/ng.3258
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- Article
Simultaneous generation of many RNA-seq libraries in a single reaction.
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- Nature Methods, 2015, v. 12, n. 4, p. 323, doi. 10.1038/nmeth.3313
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- Article
Transcription factor binding dynamics during human ES cell differentiation.
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- Nature, 2015, v. 518, n. 7539, p. 344, doi. 10.1038/nature14233
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- Article
Dissecting neural differentiation regulatory networks through epigenetic footprinting.
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- Nature, 2015, v. 518, n. 7539, p. 355, doi. 10.1038/nature13990
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- Article
Comprehensive mutational scanning of a kinase in vivo reveals substrate-dependent fitness landscapes.
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- Nucleic Acids Research, 2014, v. 42, n. 14, p. e112, doi. 10.1093/nar/gku511
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- Article
Corrigendum: Comparative analysis of RNA sequencing methods for degraded or low-input samples.
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- Nature Methods, 2014, v. 11, n. 2, p. 210, doi. 10.1038/nmeth0214-210e
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- Article
Charting a dynamic DNA methylation landscape of the human genome.
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- Nature, 2013, v. 500, n. 7463, p. 477, doi. 10.1038/nature12433
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- Article
Comparative analysis of RNA sequencing methods for degraded or low-input samples.
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- Nature Methods, 2013, v. 10, n. 7, p. 623, doi. 10.1038/nmeth.2483
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- Article
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells.
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- Nature, 2013, v. 498, n. 7453, p. 236, doi. 10.1038/nature12172
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- Article
Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing.
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- Nature Genetics, 2013, v. 45, n. 3, p. 299, doi. 10.1038/ng.2543
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- Article
Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA methylation profiling.
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- Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R92
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- Article
A unique regulatory phase of DNA methylation in the early mammalian embryo.
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- Nature, 2012, v. 484, n. 7394, p. 339, doi. 10.1038/nature10960
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- Article
Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay.
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- Nature Biotechnology, 2012, v. 30, n. 3, p. 271, doi. 10.1038/nbt.2137
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- Article
Genomic Distribution and Inter-Sample Variation of Non-CpG Methylation across Human Cell Types.
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- PLoS Genetics, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pgen.1002389
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- Article
Hybrid selection for sequencing pathogen genomes from clinical samples.
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- Genome Biology, 2011, v. 12, n. 8, p. 1, doi. 10.1186/gb-2011-12-8-r73
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- Article
Full-length transcriptome assembly from RNA-Seq data without a reference genome.
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- Nature Biotechnology, 2011, v. 29, n. 7, p. 644, doi. 10.1038/nbt.1883
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- Article
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells.
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- Nature Biotechnology, 2011, v. 29, n. 5, p. 436, doi. 10.1038/nbt.1861
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- Article
Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries.
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- Genome Biology, 2011, v. 12, n. 2, p. 1, doi. 10.1186/gb-2011-12-2-r18
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- Article
Quantitative comparison of genome-wide DNA methylation mapping technologies.
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- Nature Biotechnology, 2010, v. 28, n. 10, p. 1106, doi. 10.1038/nbt.1681
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- Article
Comprehensive comparative analysis of strand-specific RNA sequencing methods.
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- Nature Methods, 2010, v. 7, n. 9, p. 709, doi. 10.1038/nmeth.1491
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- Article
Corrigendum: Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs.
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- 2010
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- Correction notice
Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs.
- Published in:
- Nature Biotechnology, 2010, v. 28, n. 5, p. 503, doi. 10.1038/nbt.1633
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- Article
Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution.
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- Nature Methods, 2010, v. 7, n. 2, p. 133, doi. 10.1038/nmeth.1414
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- Article
ZBED6, a Novel Transcription Factor Derived from a Domesticated DNA Transposon Regulates IGF2 Expression and Muscle Growth.
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- PLoS Biology, 2009, v. 7, n. 12, p. 1, doi. 10.1371/journal.pbio.1000256
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- Article
Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing.
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- Nature Biotechnology, 2009, v. 27, n. 2, p. 182, doi. 10.1038/nbt.1523
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- Article
Genome-scale DNA methylation maps of pluripotent and differentiated cells.
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- Nature, 2008, v. 454, n. 7205, p. 766, doi. 10.1038/nature07107
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- Article
Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis.
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- Nucleic Acids Research, 2005, v. 33, n. 18, p. 5868, doi. 10.1093/nar/gki901
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- Article
Transfer of yeast artificial chromosomes from yeast to mammalian cells.
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- BioEssays, 1991, v. 13, n. 10, p. 545, doi. 10.1002/bies.950131009
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- Article