Works by Glöckner, Frank-Oliver
Results: 70
FastaValidator: an open-source Java library to parse and validate FASTA formatted sequences.
- Published in:
- BMC Research Notes, 2014, v. 7, n. 1, p. 2, doi. 10.1186/1756-0500-7-365
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- Publication type:
- Article
Prospective FAIR bathymetry data archiving in PANGAEA - Data Publisher for Earth & Environmental Science.
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- Bollettino di Geofisica Teorica ed Applicata, 2021, v. 62, p. 250
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- Publication type:
- Article
UniEuk: Time to Speak a Common Language in Protistology!
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- Journal of Eukaryotic Microbiology, 2017, v. 64, n. 3, p. 407, doi. 10.1111/jeu.12414
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- Publication type:
- Article
MetaBar -- a tool for consistent contextual dataacquisition and standards compliant submission.
- Published in:
- BMC Bioinformatics, 2010, v. 11, p. 358, doi. 10.1186/1471-2105-11-358
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- Publication type:
- Article
JCoast -- A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes.
- Published in:
- 2008
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- Publication type:
- Product Review
Graphical representation of ribosomal RNA probe accessibility data using ARB software package.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 61, doi. 10.1186/1471-2105-6-61
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- Publication type:
- Article
TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences.
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- BMC Bioinformatics, 2004, v. 5, p. 163, doi. 10.1186/1471-2105-5-163
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- Publication type:
- Article
FAIR data in meta-omics research: Using the MODCO schema to describe structural and operational elements of workflows from field to publication.
- Published in:
- 2019
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- Publication type:
- Abstract
Mainstreaming Molecular Biodiversity: A call for a unified and interoperable framework.
- Published in:
- 2019
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- Publication type:
- Abstract
NFDI4BioDiversity: Biodiversity, ecology and environmental data.
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- 2019
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- Publication type:
- Abstract
The SILVA Database Project: An ELIXIR core data resource for high-quality ribosomal RNA sequences.
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- 2019
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- Publication type:
- Abstract
Microbial Diversity of the Freshwater Sponge Spongilla lacustris.
- Published in:
- Microbial Ecology, 2005, v. 50, n. 2, p. 206, doi. 10.1007/s00248-004-0172-x
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- Publication type:
- Article
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.
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- Bioinformatics, 2016, v. 32, n. 6, p. 929, doi. 10.1093/bioinformatics/btv681
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- Publication type:
- Article
Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 5, p. 918, doi. 10.1038/ismej.2010.180
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- Publication type:
- Article
Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 1, p. 107, doi. 10.1038/ismej.2010.94
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- Publication type:
- Article
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 7, p. 882, doi. 10.1038/ismej.2010.6
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- Publication type:
- Article
Repositories for Taxonomic Data: Where We Are and What is Missing.
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- Systematic Biology, 2020, v. 69, n. 6, p. 1231, doi. 10.1093/sysbio/syaa026
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- Publication type:
- Article
The Genomic Standards Consortium.
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- PLoS Biology, 2011, v. 9, n. 6, p. 1, doi. 10.1371/journal.pbio.1001088
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- Publication type:
- Article
Insights into the Genome of Large Sulfur Bacteria Revealed by Analysis of Single Filaments.
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- PLoS Biology, 2007, v. 5, n. 9, p. e230, doi. 10.1371/journal.pbio.0050230
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- Publication type:
- Article
Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1<sup>T</sup>.
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- Proteomics, 2008, v. 8, n. 8, p. 1608, doi. 10.1002/pmic.200701017
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- Publication type:
- Article
PANGAEA - Data Publisher for Earth & Environmental Science.
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- Scientific Data, 2023, v. 10, n. 1, p. 1, doi. 10.1038/s41597-023-02269-x
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- Publication type:
- Article
Analysis of Bacterial Communities on North Sea Macroalgae and Characterization of the Isolated Planctomycetes Adhaeretor mobilis gen. nov., sp. nov., Roseimaritima multifibrata sp. nov., Rosistilla ulvae sp. nov. and Rubripirellula lacrimiformis sp. nov.
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- Microorganisms, 2021, v. 9, n. 7, p. 1494, doi. 10.3390/microorganisms9071494
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- Publication type:
- Article
Identification of Habitat-Specific Biomes of Aquatic Fungal Communities Using a Comprehensive Nearly Full-Length 18S rRNA Dataset Enriched with Contextual Data.
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- PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0134377
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- Publication type:
- Article
Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases.
- Published in:
- Briefings in Bioinformatics, 2021, v. 22, n. 5, p. 1, doi. 10.1093/bib/bbab010
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- Publication type:
- Article
A generally applicable lightweight method for calculating a value structure for tools and services in bioinformatics infrastructure projects.
- Published in:
- Briefings in Bioinformatics, 2019, p. 1215, doi. 10.1093/bib/bbx140
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- Publication type:
- Article
Current opportunities and challenges in microbial metagenome analysis—a bioinformatic perspective.
- Published in:
- Briefings in Bioinformatics, 2012, v. 13, n. 6, p. 728, doi. 10.1093/bib/bbs039
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- Publication type:
- Article
Transcriptional response of the model planctomycete Rhodopirellula baltica SH1<sup>T</sup> to changing environmental conditions.
- Published in:
- BMC Genomics, 2009, v. 10, p. 410, doi. 10.1186/1471-2164-10-410
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- Publication type:
- Article
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences.
- Published in:
- Nature Reviews Microbiology, 2014, v. 12, n. 9, p. 635, doi. 10.1038/nrmicro3330
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- Publication type:
- Article
Analysis of bacterial communities in a municipal duck pond during a phytoplankton bloom and isolation of Anatilimnocola aggregata gen. nov., sp. nov., Lacipirellula limnantheis sp. nov. and Urbifossiella limnaea gen. nov., sp. nov. belonging to the phylum Planctomycetes
- Published in:
- Environmental Microbiology, 2021, v. 23, n. 3, p. 1379, doi. 10.1111/1462-2920.15341
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- Publication type:
- Article
Candidatus Desulfofervidus auxilii, a hydrogenotrophic sulfate-reducing bacterium involved in the thermophilic anaerobic oxidation of methane.
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- Environmental Microbiology, 2016, v. 18, n. 9, p. 3073, doi. 10.1111/1462-2920.13283
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- Publication type:
- Article
Single-cell genomics of uncultivated deep-branching magnetotactic bacteria reveals a conserved set of magnetosome genes.
- Published in:
- Environmental Microbiology, 2016, v. 18, n. 1, p. 21, doi. 10.1111/1462-2920.12907
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- Publication type:
- Article
The gill chamber epibiosis of deep-sea shrimp R imicaris exoculata: an in-depth metagenomic investigation and discovery of Z etaproteobacteria.
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- Environmental Microbiology, 2014, v. 16, n. 9, p. 2723, doi. 10.1111/1462-2920.12406
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- Publication type:
- Article
H alorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader.
- Published in:
- Environmental Microbiology, 2014, v. 16, n. 8, p. 2525, doi. 10.1111/1462-2920.12393
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- Publication type:
- Article
Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study.
- Published in:
- Environmental Microbiology, 2012, v. 14, n. 1, p. 268, doi. 10.1111/j.1462-2920.2011.02634.x
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- Publication type:
- Article
Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean.
- Published in:
- Environmental Microbiology, 2012, v. 14, n. 1, p. 52, doi. 10.1111/j.1462-2920.2011.02555.x
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- Publication type:
- Article
Phylogenetic diversity and metagenomics of candidate division OP3.
- Published in:
- Environmental Microbiology, 2010, v. 12, n. 5, p. 1218, doi. 10.1111/j.1462-2920.2010.02164.x
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- Publication type:
- Article
Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group.
- Published in:
- Environmental Microbiology, 2010, v. 12, n. 2, p. 422, doi. 10.1111/j.1462-2920.2009.02083.x
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- Publication type:
- Article
Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide.
- Published in:
- Environmental Microbiology, 2009, v. 11, n. 5, p. 1038, doi. 10.1111/j.1462-2920.2008.01825.x
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- Publication type:
- Article
Whole genome analysis of the marine Bacteroidetes‘ Gramella forsetii’ reveals adaptations to degradation of polymeric organic matter.
- Published in:
- Environmental Microbiology, 2006, v. 8, n. 12, p. 2201, doi. 10.1111/j.1462-2920.2006.01152.x
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- Publication type:
- Article
Insights into the genomes of archaea mediating the anaerobic oxidation of methane.
- Published in:
- Environmental Microbiology, 2005, v. 7, n. 12, p. 1937, doi. 10.1111/j.1462-2920.2005.00844.x
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- Publication type:
- Article
Predominance of β-proteobacteria in summer melt pools on Arctic pack ice.
- Published in:
- Limnology & Oceanography, 2004, v. 49, n. 4, p. 1013, doi. 10.4319/lo.2004.49.4.1013
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- Publication type:
- Article
Correction to: A comprehensive fungi-specific 18S rRNA gene sequence primer toolkit suited for diverse research issues and sequencing platforms.
- Published in:
- 2019
- By:
- Publication type:
- Correction Notice
eGenomics: Cataloguing Our Complete Genome Collection III.
- Published in:
- 2007
- By:
- Publication type:
- Proceeding
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB.
- Published in:
- Nucleic Acids Research, 2007, v. 35, n. 21, p. 7188, doi. 10.1093/nar/gkm864
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- Publication type:
- Article
Megx.net—database resources for marine ecological genomics.
- Published in:
- Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d390, doi. 10.1093/nar/gkj070
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- Publication type:
- Article
An open-source GIS-enabled lookup service for Nagoya Protocol party information.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2020, v. 2020, p. 1, doi. 10.1093/database/baaa014
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- Publication type:
- Article
Meta-omics data and collection objects (MOD-CO): a conceptual schema and data model for processing sample data in meta-omics research.
- Published in:
- Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/baz002
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- Publication type:
- Article
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes.
- Published in:
- Bioinformatics, 2012, v. 28, n. 14, p. 1823, doi. 10.1093/bioinformatics/bts252
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- Publication type:
- Article
Seasonal Dynamics of Pelagic Mycoplanktonic Communities: Interplay of Taxon Abundance, Temporal Occurrence, and Biotic Interactions.
- Published in:
- Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.01305
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- Publication type:
- Article
Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom.
- Published in:
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 6, p. 1410, doi. 10.1038/ismej.2014.225
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- Publication type:
- Article