Works by Ge-Fei Hao

Results: 44

HerbiPAD: a free web platform to comprehensively analyze constitutive property and herbicide‐likeness to estimate chemical bioavailability.

Published in:

Pest Management Science, 2021, v. 77, n. 3, p. 1273, doi. 10.1002/ps.6140

By:

Huang, Jun‐Jie;
Wang, Fan;
Ouyang, Yan;
Huang, Yuan‐Qin;
Jia, Chen‐Yang;
Zhong, Hang;
Hao, Ge‐Fei

Publication type:

Article

Computational design of novel inhibitors to overcome weed resistance associated with acetohydroxyacid synthase ( AHAS) P197L mutant.

Published in:

Pest Management Science, 2017, v. 73, n. 7, p. 1373, doi. 10.1002/ps.4460

By:

Qu, Ren‐Yu;
Yang, Jing‐Fang;
Liu, Yu‐Chao;
Chen, Qiong;
Hao, Ge‐Fei;
Niu, Cong‐Wei;
Xi, Zhen;
Yang, Guang‐Fu

Publication type:

Article

Design, synthesis and herbicidal activity of novel quinazoline-2,4-diones as 4-hydroxyphenylpyruvate dioxygenase inhibitors.

Published in:

Pest Management Science, 2015, v. 71, n. 8, p. 1122, doi. 10.1002/ps.3894

By:

Wang, Da‐Wei;
Lin, Hong‐Yan;
Cao, Run‐Jie;
Ming, Ze‐Zhong;
Chen, Tao;
Hao, Ge‐Fei;
Yang, Wen‐Chao;
Yang, Guang‐Fu

Publication type:

Article

Chemical Manipulation of Abscisic Acid Signaling: A New Approach to Abiotic and Biotic Stress Management in Agriculture.

Published in:

Advanced Science, 2020, v. 7, n. 18, p. 1, doi. 10.1002/advs.202001265

By:

Hewage, Kamalani Achala H.;
Yang, Jing‐Fang;
Wang, Di;
Hao, Ge‐Fei;
Yang, Guang‐Fu;
Zhu, Jian‐Kang

Publication type:

Article

Ecology and Evolution of Marine Fungi With Their Adaptation to Climate Change.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.719000

By:

Kumar, Vinit;
Sarma, V. Venkateswara;
Thambugala, Kasun M.;
Huang, Jun-Jie;
Li, Xiang-Yang;
Hao, Ge-Fei

Publication type:

Article

ACID: a free tool for drug repurposing using consensus inverse docking strategy.

Published in:

Journal of Cheminformatics, 2019, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13321-019-0394-z

By:

Wang, Fan;
Wu, Feng-Xu;
Li, Cheng-Zhang;
Jia, Chen-Yang;
Su, Sun-Wen;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Copper‐Catalyzed Oxygenative Skeletal Rearrangement of Tetrahydro‐β‐carbolines Using H2O and O2 as Oxygen Sources.

Published in:

Angewandte Chemie International Edition, 2023, v. 62, n. 51, p. 1, doi. 10.1002/anie.202313687

By:

Peng, Yu‐Sheng;
Wang, Wei;
Shi, Jun;
Wu, Wei;
Song, Jun‐Rong;
Pan, Wei‐Dong;
Hao, Ge‐Fei;
Ren, Hai

Publication type:

Article

Molecular insights into the mechanism of 4‐hydroxyphenylpyruvate dioxygenase inhibition: enzyme kinetics, X‐ray crystallography and computational simulations.

Published in:

FEBS Journal, 2019, v. 286, n. 5, p. 975, doi. 10.1111/febs.14747

By:

Lin, Hong‐Yan;
Yang, Jing‐Fang;
Wang, Da‐Wei;
Hao, Ge‐Fei;
Dong, Jiang‐Qing;
Wang, Yu‐Xia;
Yang, Wen‐Chao;
Wu, Jia‐Wei;
Zhan, Chang‐Guo;
Yang, Guang‐Fu

Publication type:

Article

Identification, evolution and alternative splicing profile analysis of the splicing factor 30 (SPF30) in plant species.

Published in:

Planta: An International Journal of Plant Biology, 2019, v. 249, n. 6, p. 1997, doi. 10.1007/s00425-019-03146-x

By:

Zhang, Di;
Yang, Jing-Fang;
Gao, Bei;
Liu, Tie-Yuan;
Hao, Ge-Fei;
Yang, Guang-Fu;
Fu, Li-Jun;
Chen, Mo-Xian;
Zhang, Jianhua

Publication type:

Article

Genome-wide identification and functional analysis of the splicing component SYF2/NTC31/p29 across different plant species.

Published in:

Planta: An International Journal of Plant Biology, 2019, v. 249, n. 2, p. 583, doi. 10.1007/s00425-018-3026-3

By:

Liu, Ying-Gao;
Tian, Yuan;
Hu, Qi-Juan;
Chen, Mo-Xian;
Zhang, Jianhua;
Gao, Bei;
Zhang, Di;
Yang, Jing-Fang;
Achala, H. H. K.;
Hao, Ge-Fei;
Yang, Guang-Fu;
Dian, Zhi-Yong

Publication type:

Article

Systematic characterization of the branch point binding protein, splicing factor 1, gene family in plant development and stress responses.

Published in:

BMC Plant Biology, 2020, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12870-020-02570-6

By:

Zhang, Kai-Lu;
Feng, Zhen;
Yang, Jing-Fang;
Yang, Feng;
Yuan, Tian;
Zhang, Di;
Hao, Ge-Fei;
Fang, Yan-Ming;
Zhang, Jianhua;
Wu, Caie;
Chen, Mo-Xian;
Zhu, Fu-Yuan

Publication type:

Article

Human‐virus protein‐protein interactions maps assist in revealing the pathogenesis of viral infection.

Published in:

Reviews in Medical Virology, 2024, v. 34, n. 1, p. 1, doi. 10.1002/rmv.2517

By:

Chen, Hui‐Min;
Liu, Jia‐Xin;
Liu, Di;
Hao, Ge‐Fei;
Yang, Guang‐Fu

Publication type:

Article

A Phylogenetically Informed Comparison of GH1 Hydrolases between Arabidopsis and Rice Response to Stressors.

Published in:

Frontiers in Plant Science, 2017, v. 8, p. 1, doi. 10.3389/fpls.2017.00350

By:

Yun-Ying Cao;
Jing-Fang Yang;
Tie-Yuan Liu;
Zhen-Feng Su;
Fu-Yuan Zhu;
Mo-Xian Chen;
Tao Fan;
Neng-Hui Ye;
Zhen Feng;
Ling-Juan Wang;
Ge-Fei Hao;
Jianhua Zhang;
Ying-Gao Liu

Publication type:

Article

Computational gibberellin-binding channel discovery unraveling the unexpected perception mechanism of hormone signal by gibberellin receptor.

Published in:

Journal of Computational Chemistry, 2013, v. 34, n. 24, p. 2055, doi. 10.1002/jcc.23355

By:

Hao, Ge‐Fei;
Yang, Sheng‐Gang;
Yang, Guang‐Fu;
Zhan, Chang‐Guo

Publication type:

Article

Copper‐Catalyzed Oxygenative Skeletal Rearrangement of Tetrahydro‐β‐carbolines Using H2O and O2 as Oxygen Sources.

Published in:

Angewandte Chemie, 2023, v. 135, n. 51, p. 1, doi. 10.1002/ange.202313687

By:

Peng, Yu‐Sheng;
Wang, Wei;
Shi, Jun;
Wu, Wei;
Song, Jun‐Rong;
Pan, Wei‐Dong;
Hao, Ge‐Fei;
Ren, Hai

Publication type:

Article

Wearable sensor supports in‐situ and continuous monitoring of plant health in precision agriculture era.

Published in:

Plant Biotechnology Journal, 2024, v. 22, n. 6, p. 1516, doi. 10.1111/pbi.14283

By:

Li, Xiao‐Hong;
Li, Meng‐Zhao;
Li, Jing‐Yi;
Gao, Yang‐Yang;
Liu, Chun‐Rong;
Hao, Ge‐Fei

Publication type:

Article

PlantSPEAD: a web resource towards comparatively analysing stress‐responsive expression of splicing‐related proteins in plant.

Published in:

Plant Biotechnology Journal, 2021, v. 19, n. 2, p. 227, doi. 10.1111/pbi.13486

By:

Chen, Mo‐Xian;
Mei, Long‐Can;
Wang, Fan;
Boyagane Dewayalage, Iromi Kusum Wijethunge;
Yang, Jing‐Fang;
Dai, Lei;
Yang, Guang‐Fu;
Gao, Bei;
Cheng, Chao‐Lin;
Liu, Ying‐Gao;
Zhang, Jianhua;
Hao, Ge‐Fei

Publication type:

Article

Anti-CRISPRdb: a comprehensive online resource for anti-CRISPR proteins.

Published in:

Nucleic Acids Research, 2018, v. 46, n. D1, p. D393, doi. 10.1093/nar/gkx835

By:

Dong, Chuan;
Hao, Ge-Fei;
Hua, Hong-Li;
Liu, Shuo;
Labena, Abraham Alemayehu;
Chai, Guoshi;
Huang, Jian;
Rao, Nini;
Guo, Feng-Biao

Publication type:

Article

ACFIS: a web server for fragment-based drug discovery.

Published in:

Nucleic Acids Research, 2016, v. 44, n. W1, p. W550, doi. 10.1093/nar/gkw393

By:

Ge-Fei Hao;
Wen Jiang;
Yuan-Nong Ye;
Feng-Xu Wu;
Xiao-Lei Zhu;
Feng-Biao Guo;
Guang-Fu Yang

Publication type:

Article

Structural dynamics and determinants of abscisic acid–receptor binding preference in different aggregation states.

Published in:

Journal of Experimental Botany, 2021, v. 72, n. 13, p. 5051, doi. 10.1093/jxb/erab178

By:

Yang, Jing-Fang;
Chen, Mo-Xian;
Zhang, Jianhua;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Genome-wide phylogenetic and structural analysis reveals the molecular evolution of the ABA receptor gene family.

Published in:

Journal of Experimental Botany, 2020, v. 71, n. 4, p. 1322, doi. 10.1093/jxb/erz511

By:

Yang, Jing-Fang;
Chen, Mo-Xian;
Zhang, Jian-Hua;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Structure-activity relationships of diphenyl-ether as protoporphyrinogen oxidase inhibitors: insights from computational simulations.

Published in:

Journal of Computer-Aided Molecular Design, 2011, v. 25, n. 3, p. 213, doi. 10.1007/s10822-011-9412-6

By:

Ge-Fei Hao;
Ying Tan;
Ning-Xi Yu;
Guang-Fu Yang

Publication type:

Article

Catalase Inhibitors with Dual Pro‐Oxidant Effect as New Therapeutic Agents in Castration‐Resistant Prostate Cancer.

Published in:

Advanced Therapeutics, 2021, v. 4, n. 3, p. 1, doi. 10.1002/adtp.202000164

By:

Chen, Yuan‐Yuan;
Liang, Hao‐Qi;
Liu, Meng‐Ting;
Huang, Wei;
Yi, Peng‐Fei;
Yuan, Si‐Qi;
Mei, Long‐Can;
Hu, Ying‐Hui;
Cao, Ya‐Ya;
Hao, Ge‐Fei;
Zhang, Dan;
Yang, Guang‐Fu

Publication type:

Article

Rational Design of Highly Potent and Slow-Binding Cytochrome bc1 Inhibitor as Fungicide by Computational Substitution Optimization.

Published in:

Scientific Reports, 2015, p. 13471, doi. 10.1038/srep13471

By:

Hao, Ge-Fei;
Yang, Sheng-Gang;
Huang, Wei;
Wang, Le;
Shen, Yan-Qing;
Tu, Wen-Long;
Li, Hui;
Huang, Li-Shar;
Wu, Jia-Wei;
Berry, Edward A.;
Yang, Guang-Fu

Publication type:

Article

Computational and Experimental Insights into the Mechanism of Substrate Recognition and Feedback Inhibition of Protoporphyrinogen Oxidase.

Published in:

PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069198

By:

Hao, Ge-Fei;
Tan, Ying;
Yang, Sheng-Gang;
Wang, Zhi-Fang;
Zhan, Chang-Guo;
Xi, Zhen;
Yang, Guang-Fu

Publication type:

Article

The Role of Phe82 and Phe351 in Auxin-Induced Substrate Perception by TIR1 Ubiquitin Ligase: A Novel Insight from Molecular Dynamics Simulations.

Published in:

PLoS ONE, 2010, v. 5, n. 5, p. 1, doi. 10.1371/journal.pone.0010742

By:

Ge-Fei Hao;
Guang-Fu Yang

Publication type:

Article

Phylogenetic comparison of 5′ splice site determination in central spliceosomal proteins of the U1‐70K gene family, in response to developmental cues and stress conditions.

Published in:

Plant Journal, 2020, v. 103, n. 1, p. 357, doi. 10.1111/tpj.14735

By:

Chen, Mo‐Xian;
Zhang, Kai‐Lu;
Gao, Bei;
Yang, Jing‐Fang;
Tian, Yuan;
Das, Debatosh;
Fan, Tao;
Dai, Lei;
Hao, Ge‐Fei;
Yang, Guang‐Fu;
Zhang, Jianhua;
Zhu, Fu‐Yuan;
Fang, Yan‐Ming

Publication type:

Article

Proteogenomic analysis reveals alternative splicing and translation as part of the abscisic acid response in Arabidopsis seedlings.

Published in:

Plant Journal, 2017, v. 91, n. 3, p. 518, doi. 10.1111/tpj.13571

By:

Zhu, Fu‐Yuan;
Chen, Mo‐Xian;
Ye, Neng‐Hui;
Shi, Lu;
Ma, Kai‐Long;
Yang, Jing‐Fang;
Cao, Yun‐Ying;
Zhang, Youjun;
Yoshida, Takuya;
Fernie, Alisdair R.;
Fan, Guang‐Yi;
Wen, Bo;
Zhou, Ruo;
Liu, Tie‐Yuan;
Fan, Tao;
Gao, Bei;
Zhang, Di;
Hao, Ge‐Fei;
Xiao, Shi;
Liu, Ying‐Gao

Publication type:

Article

ACFIS 2.0: an improved web-server for fragment-based drug discovery via a dynamic screening strategy.

Published in:

Nucleic Acids Research, 2023, v. 51, n. W1, p. W25, doi. 10.1093/nar/gkad348

By:

Shi, Xing-Xing;
Wang, Zhi-Zheng;
Wang, Fan;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Design, synthesis and herbicidal activity of novel quinazoline-2,4-diones as 4-hydroxyphenylpyruvate dioxygenase inhibitors.

Published in:

Oxford Bulletin of Economics & Statistics, 2015, v. 77, n. 4, p. 1122, doi. 10.1002/ps.3894

By:

Da-Wei Wang;
Hong-Yan Lin;
Run-Jie Cao;
Ze-Zhong Ming;
Tao Chen;
Ge-Fei Hao;
Wen-Chao Yang;
Guang-Fu Yang

Publication type:

Article

Bioinformatics toolbox for exploring target mutation-induced drug resistance.

Published in:

Briefings in Bioinformatics, 2023, v. 24, n. 2, p. 1, doi. 10.1093/bib/bbad033

By:

Huang, Yuan-Qin;
Sun, Ping;
Chen, Yi;
Liu, Huan-Xiang;
Hao, Ge-Fei;
Song, Bao-An

Publication type:

Article

Exploring the kinase-inhibitor fragment interaction space facilitates the discovery of kinase inhibitor overcoming resistance by mutations.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 4, p. 1, doi. 10.1093/bib/bbac203

By:

Wang, Zhi-Zheng;
Wang, Ming-Shu;
Wang, Fan;
Shi, Xing-Xing;
Huang, Wei;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

PTMdyna: exploring the influence of post-translation modifications on protein conformational dynamics.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1093/bib/bbab424

By:

Shi, Xing-Xing;
Wang, Zhi-Zheng;
Wang, Yu-Liang;
Huang, Guang-Yi;
Yang, Jing-Fang;
Wang, Fan;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Web repositories of natural agents promote pests and pathogenic microbes management.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab205

By:

Jin, Yin;
Wang, Zheng;
Dong, An-Yu;
Huang, Yuan-Qin;
Hao, Ge-Fei;
Song, Bao-An

Publication type:

Article

HISNAPI: a bioinformatic tool for dynamic hot spot analysis in nucleic acid–protein interface with a case study.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 5, p. 1, doi. 10.1093/bib/bbaa373

By:

Mei, Long-Can;
Wang, Yu-Liang;
Wu, Feng-Xu;
Wang, Fan;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Cloud 3D-QSAR: a web tool for the development of quantitative structure–activity relationship models in drug discovery.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 4, p. 1, doi. 10.1093/bib/bbaa276

By:

Wang, Yu-Liang;
Wang, Fan;
Shi, Xing-Xing;
Jia, Chen-Yang;
Wu, Feng-Xu;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Bioinformatics toolbox for exploring protein phosphorylation network.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 3, p. 1, doi. 10.1093/bib/bbaa134

By:

Shi, Xing-Xing;
Wu, Feng-Xu;
Mei, Long-Can;
Wang, Yu-Liang;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Erratum to: LARMD: integration of bioinformatic resources to profile ligand-driven protein dynamics with a case on the activation of estrogen receptor.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 1, p. 605, doi. 10.1093/bib/bbaa010

By:

Yang, Jing-Fang;
Wang, Fan;
Chen, Yu-Zong;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

LARMD: integration of bioinformatic resources to profile ligand-driven protein dynamics with a case on the activation of estrogen receptor.

Published in:

Briefings in Bioinformatics, 2020, v. 21, n. 6, p. 2206, doi. 10.1093/bib/bbz141

By:

Yang, Jing-Fang;
Wang, Fan;
Chen, Yu-Zong;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

AIMMS suite: a web server dedicated for prediction of drug resistance on protein mutation.

Published in:

Briefings in Bioinformatics, 2020, v. 21, n. 1, p. 318, doi. 10.1093/bib/bby113

By:

Wu, Feng-Xu;
Wang, Fan;
Yang, Jing-Fang;
Jiang, Wen;
Wang, Meng-Yao;
Jia, Chen-Yang;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article

Web tools support predicting protein–nucleic acid complexes stability with affinity changes.

Published in:

Wiley Interdisciplinary Reviews: RNA, 2023, v. 14, n. 5, p. 1, doi. 10.1002/wrna.1781

By:

Zhang, Xiao;
Mei, Long‐Can;
Gao, Yang‐Yang;
Hao, Ge‐Fei;
Song, Bao‐An

Publication type:

Article

Cover Image.

Published in:

Wiley Interdisciplinary Reviews: RNA, 2022, v. 13, n. 2, p. 1, doi. 10.1002/wrna.1726

By:

Mei, Long‐Can;
Hao, Ge‐Fei;
Yang, Guang‐Fu

Publication type:

Article

Computational methods for predicting hotspots at protein–RNA interfaces.

Published in:

Wiley Interdisciplinary Reviews: RNA, 2022, v. 13, n. 2, p. 1, doi. 10.1002/wrna.1675

By:

Mei, Long‐Can;
Hao, Ge‐Fei;
Yang, Guang‐Fu

Publication type:

Article

Unveiling toxicity profile for food risk components: A manually curated toxicological databank of food-relevant chemicals.

Published in:

Critical Reviews in Food Science & Nutrition, 2024, v. 64, n. 15, p. 5176, doi. 10.1080/10408398.2022.2152423

By:

Shi, Xing-Xing;
Wang, Fan;
Wang, Zhi-Zheng;
Huang, Guang-Yi;
Li, Min;
Simal-Gandara, Jesus;
Hao, Ge-Fei;
Yang, Guang-Fu

Publication type:

Article