Found: 33
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Matrix factorization and transfer learning uncover regulatory biology across multiple single-cell ATAC-seq data sets.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. 12, p. e68, doi. 10.1093/nar/gkaa349
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- Publication type:
- Article
Integrated time course omics analysis distinguishes immediate therapeutic response from acquired resistance.
- Published in:
- Genome Medicine, 2018, v. 10, n. 1, p. N.PAG, doi. 10.1186/s13073-018-0545-2
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- Publication type:
- Article
PDGF enhances the protective effect of adipose stem cell-derived extracellular vesicles in a model of acute hindlimb ischemia.
- Published in:
- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-36143-3
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- Publication type:
- Article
Epigenetic Regulations of Perineural Invasion in Head and Neck Squamous Cell Carcinoma.
- Published in:
- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.848557
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- Publication type:
- Article
Toward Signaling-Driven Biomarkers Immune to Normal Tissue Contamination.
- Published in:
- Cancer Informatics, 2016, n. 15, p. 15, doi. 10.4137/CIN.S32468
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- Publication type:
- Article
PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF.
- Published in:
- Bioinformatics, 2017, v. 33, n. 12, p. 1892, doi. 10.1093/bioinformatics/btx058
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- Publication type:
- Article
Differentially Methylated Super-Enhancers Regulate Target Gene Expression in Human Cancer.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-51018-x
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- Publication type:
- Article
Correction: Novel Insight into Mutational Landscape of Head and Neck Squamous Cell Carcinoma.
- Published in:
- 2020
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- Publication type:
- Correction Notice
Correction: Integrated single-cell and bulk gene expression and ATAC-seq reveals heterogeneity and early changes in pathways associated with resistance to cetuximab in HNSCC-sensitive cell lines.
- Published in:
- 2020
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- Publication type:
- corrected article
Integrated single-cell and bulk gene expression and ATAC-seq reveals heterogeneity and early changes in pathways associated with resistance to cetuximab in HNSCC-sensitive cell lines.
- Published in:
- British Journal of Cancer, 2020, v. 123, n. 1, p. 101, doi. 10.1038/s41416-020-0851-5
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- Publication type:
- Article
Integrated single-cell and bulk gene expression and ATAC-seq reveals heterogeneity and early changes in pathways associated with resistance to cetuximab in HNSCC-sensitive cell lines.
- Published in:
- 2020
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- Publication type:
- journal article
CancerInSilico: An R/Bioconductor package for combining mathematical and statistical modeling to simulate time course bulk and single cell gene expression data in cancer.
- Published in:
- PLoS Computational Biology, 2019, v. 15, n. 5, p. 1, doi. 10.1371/journal.pcbi.1006935
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- Publication type:
- Article
Radiomic biomarkers of locoregional recurrence: prognostic insights from oral cavity squamous cell carcinoma preoperative CT scans.
- Published in:
- Frontiers in Oncology, 2024, p. 1, doi. 10.3389/fonc.2024.1380599
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- Publication type:
- Article
Clinical and genomic characterization of chemoradiation-resistant HPV-positive oropharyngeal squamous cell carcinoma.
- Published in:
- Frontiers in Oncology, 2024, p. 1, doi. 10.3389/fonc.2024.1336577
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- Publication type:
- Article
Novel Insight into Mutational Landscape of Head and Neck Squamous Cell Carcinoma.
- Published in:
- PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0093102
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- Publication type:
- Article
Expression Microarray Analysis Reveals Alternative Splicing of <i>LAMA3</i> and <i>DST</i> Genes in Head and Neck Squamous Cell Carcinoma.
- Published in:
- PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0091263
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- Publication type:
- Article
Preferential Activation of the Hedgehog Pathway by Epigenetic Modulations in HPV Negative HNSCC Identified with Meta-Pathway Analysis.
- Published in:
- PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0078127
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- Publication type:
- Article
Suprabasin Is Hypomethylated and Associated with Metastasis in Salivary Adenoid Cystic Carcinoma.
- Published in:
- PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0048582
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- Publication type:
- Article
Dose-Dependent Activation of Putative Oncogene SBSN by BORIS.
- Published in:
- PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0040389
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- Publication type:
- Article
Structural interpretation of DNA-protein hydroxyl-radical footprinting experiments with high resolution using HYDROID.
- Published in:
- Nature Protocols, 2018, v. 13, n. 11, p. 2535, doi. 10.1038/s41596-018-0048-z
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- Publication type:
- Article
Correcting Transcription Factor Gene Sets for Copy Number and Promoter Methylation Variations.
- Published in:
- Drug Development Research, 2014, v. 75, n. 6, p. 343, doi. 10.1002/ddr.21220
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- Publication type:
- Article
A polar barrier to transcription can be circumvented by remodeler-induced nucleosome translocation.
- Published in:
- Nucleic Acids Research, 2011, v. 39, n. 9, p. 3520, doi. 10.1093/nar/gkq1273
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- Publication type:
- Article
Using DNA mechanics to predict in vitro nucleosome positions and formation energies.
- Published in:
- Nucleic Acids Research, 2009, v. 37, n. 14, p. 4707, doi. 10.1093/nar/gkp475
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- Publication type:
- Article
Epigenetic regulation of gene expression in cancer: techniques, resources and analysis.
- Published in:
- Briefings in Functional Genomics, 2018, v. 17, n. 1, p. 49, doi. 10.1093/bfgp/elx018
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- Publication type:
- Article
Connecting the dots: investigating the link between environmental, genetic, and epigenetic influences in metabolomic alterations in oral squamous cell carcinoma.
- Published in:
- Journal of Experimental & Clinical Cancer Research (17569966), 2024, v. 43, n. 1, p. 1, doi. 10.1186/s13046-024-03141-5
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- Publication type:
- Article
Mechanism of chromatin remodeling and recovery during passage of RNA polymerase II.
- Published in:
- Nature Structural & Molecular Biology, 2009, v. 16, n. 12, p. 1272, doi. 10.1038/nsmb.1689
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- Publication type:
- Article
Discovery and development of differentially methylated regions in human papillomavirus‐related oropharyngeal squamous cell carcinoma.
- Published in:
- International Journal of Cancer, 2018, v. 143, n. 10, p. 2425, doi. 10.1002/ijc.31778
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- Publication type:
- Article
Characterization of functionally active gene fusions in human papillomavirus related oropharyngeal squamous cell carcinoma.
- Published in:
- International Journal of Cancer, 2016, v. 139, n. 2, p. 373, doi. 10.1002/ijc.30081
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- Publication type:
- Article
NF-κB and stat3 transcription factor signatures differentiate HPV-positive and HPV-negative head and neck squamous cell carcinoma.
- Published in:
- International Journal of Cancer, 2015, v. 137, n. 8, p. 1879, doi. 10.1002/ijc.29558
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- Publication type:
- Article
Publisher Correction: Chromatin dysregulation and DNA methylation at transcription start sites associated with transcriptional repression in cancers.
- Published in:
- 2019
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- Publication type:
- Correction Notice
Chromatin dysregulation and DNA methylation at transcription start sites associated with transcriptional repression in cancers.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09937-w
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- Publication type:
- Article
Chromatin dysregulation and DNA methylation at transcription start sites associated with transcriptional repression in cancers.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09937-w
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- Publication type:
- Article
Outlier Analysis Defines Zinc Finger Gene Family DNA Methylation in Tumors and Saliva of Head and Neck Cancer Patients.
- Published in:
- PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0142148
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- Publication type:
- Article