Works by Gasparoni, Gilles


Results: 42
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    DNA methylation analysis on purified neurons and glia dissects age and Alzheimer's disease-specific changes in the human cortex.

    Published in:
    Epigenetics & Chromatin, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13072-018-0211-3
    By:
    • Gasparoni, Gilles;
    • Bultmann, Sebastian;
    • Lutsik, Pavlo;
    • Kraus, Theo F. J.;
    • Sordon, Sabrina;
    • Vlcek, Julia;
    • Dietinger, Vanessa;
    • Steinmaurer, Martina;
    • Haider, Melanie;
    • Mulholland, Christopher B.;
    • Arzberger, Thomas;
    • Roeber, Sigrun;
    • Riemenschneider, Matthias;
    • Kretzschmar, Hans A.;
    • Giese, Armin;
    • Leonhardt, Heinrich;
    • Walter, Jörn
    Publication type:
    Article
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    Resident memory CD4<sup>+</sup> T lymphocytes mobilize from bone marrow to contribute to a systemic secondary immune reaction.

    Published in:
    European Journal of Immunology, 2022, v. 52, n. 5, p. 737, doi. 10.1002/eji.202149726
    By:
    • Cendón, Carla;
    • Du, Weijie;
    • Durek, Pawel;
    • Liu, Yuk‐Chien;
    • Alexander, Tobias;
    • Serene, Lindsay;
    • Yang, Xinyi;
    • Gasparoni, Gilles;
    • Salhab, Abdulrahman;
    • Nordström, Karl;
    • Lai, Tina;
    • Schulz, Axel R.;
    • Rao, Anna;
    • Heinz, Gitta A.;
    • Stefanski, Ana L.;
    • Claußnitzer, Anne;
    • Siewert, Katherina;
    • Dörner, Thomas;
    • Chang, Hyun‐Dong;
    • Volk, Hans‐Dieter
    Publication type:
    Article
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    Intra-pituitary follicle-stimulating hormone signaling regulates hepatic lipid metabolism in mice.

    Published in:
    Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36681-z
    By:
    • Qiao, Sen;
    • Alasmi, Samer;
    • Wyatt, Amanda;
    • Wartenberg, Philipp;
    • Wang, Hongmei;
    • Candlish, Michael;
    • Das, Debajyoti;
    • Aoki, Mari;
    • Grünewald, Ramona;
    • Zhou, Ziyue;
    • Tian, Qinghai;
    • Yu, Qiang;
    • Götz, Viktoria;
    • Belkacemi, Anouar;
    • Raza, Ahsan;
    • Ectors, Fabien;
    • Kattler, Kathrin;
    • Gasparoni, Gilles;
    • Walter, Jörn;
    • Lipp, Peter
    Publication type:
    Article
    7

    A cell-of-origin epigenetic tracer reveals clinically distinct subtypes of high-grade serous ovarian cancer.

    Published in:
    Genome Medicine, 2020, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13073-020-00786-7
    By:
    • Lo Riso, Pietro;
    • Villa, Carlo Emanuele;
    • Gasparoni, Gilles;
    • Vingiani, Andrea;
    • Luongo, Raffaele;
    • Manfredi, Anna;
    • Jungmann, Annemarie;
    • Bertolotti, Alessia;
    • Borgo, Francesca;
    • Garbi, Annalisa;
    • Lupia, Michela;
    • Laise, Pasquale;
    • Das, Vivek;
    • Pruneri, Giancarlo;
    • Viale, Giuseppe;
    • Colombo, Nicoletta;
    • Manzo, Teresa;
    • Nezi, Luigi;
    • Cavallaro, Ugo;
    • Cacchiarelli, Davide
    Publication type:
    Article
    8

    Alterations in the hepatocyte epigenetic landscape in steatosis.

    Published in:
    Epigenetics & Chromatin, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13072-023-00504-8
    By:
    • Maji, Ranjan Kumar;
    • Czepukojc, Beate;
    • Scherer, Michael;
    • Tierling, Sascha;
    • Cadenas, Cristina;
    • Gianmoena, Kathrin;
    • Gasparoni, Nina;
    • Nordström, Karl;
    • Gasparoni, Gilles;
    • Laggai, Stephan;
    • Yang, Xinyi;
    • Sinha, Anupam;
    • Ebert, Peter;
    • Falk-Paulsen, Maren;
    • Kinkley, Sarah;
    • Hoppstädter, Jessica;
    • Chung, Ho-Ryun;
    • Rosenstiel, Philip;
    • Hengstler, Jan G.;
    • Walter, Jörn
    Publication type:
    Article
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    Integrative analysis of single-cell expression data reveals distinct regulatory states in bidirectional promoters.

    Published in:
    Epigenetics & Chromatin, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13072-018-0236-7
    By:
    • Behjati Ardakani, Fatemeh;
    • Kattler, Kathrin;
    • Nordström, Karl;
    • Gasparoni, Nina;
    • Gasparoni, Gilles;
    • Fuchs, Sarah;
    • Sinha, Anupam;
    • Barann, Matthias;
    • Ebert, Peter;
    • Fischer, Jonas;
    • Hutter, Barbara;
    • Zipprich, Gideon;
    • Imbusch, Charles D.;
    • Felder, Bärbel;
    • Eils, Jürgen;
    • Brors, Benedikt;
    • Lengauer, Thomas;
    • Manke, Thomas;
    • Rosenstiel, Philip;
    • Walter, Jörn
    Publication type:
    Article
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    Epigenomic map of human liver reveals principles of zonated morphogenic and metabolic control.

    Published in:
    Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-06611-5
    By:
    • Brosch, Mario;
    • Kattler, Kathrin;
    • Herrmann, Alexander;
    • von Schönfels, Witigo;
    • Nordström, Karl;
    • Seehofer, Daniel;
    • Damm, Georg;
    • Becker, Thomas;
    • Zeissig, Sebastian;
    • Nehring, Sophie;
    • Reichel, Fabian;
    • Moser, Vincent;
    • Thangapandi, Raghavan Veera;
    • Stickel, Felix;
    • Baretton, Gustavo;
    • Röcken, Christoph;
    • Muders, Michael;
    • Matz-Soja, Madlen;
    • Krawczak, Michael;
    • Gasparoni, Gilles
    Publication type:
    Article
    13

    GENOME-WIDE MICRORNA AND MRNA EXPRESSION PATTERN IN ALZHEIMER’S DISEASE.

    Published in:
    Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2017, v. 13, p. P1291, doi. 10.1016/j.jalz.2017.06.1952
    By:
    • Pichler, Sabrina;
    • Gu, Wei;
    • Hartl, Daniela;
    • Gasparoni, Gilles;
    • Leidinger, Petra;
    • Keller, Andreas;
    • Meese, Eckart;
    • Mayhaus, Manuel;
    • Hampel, Harald;
    • Riemenschneider, Matthias
    Publication type:
    Article
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    A meta-analysis of epigenome-wide association studies in Alzheimer's disease highlights novel differentially methylated loci across cortex.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23243-4
    By:
    • Smith, Rebecca G.;
    • Pishva, Ehsan;
    • Shireby, Gemma;
    • Smith, Adam R.;
    • Roubroeks, Janou A. Y.;
    • Hannon, Eilis;
    • Wheildon, Gregory;
    • Mastroeni, Diego;
    • Gasparoni, Gilles;
    • Riemenschneider, Matthias;
    • Giese, Armin;
    • Sharp, Andrew J.;
    • Schalkwyk, Leonard;
    • Haroutunian, Vahram;
    • Viechtbauer, Wolfgang;
    • van den Hove, Daniel L. A.;
    • Weedon, Michael;
    • Brokaw, Danielle;
    • Francis, Paul T.;
    • Thomas, Alan J.
    Publication type:
    Article
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    A Monoclonal Human Alveolar Epithelial Cell Line ("Arlo") with Pronounced Barrier Function for Studying Drug Permeability and Viral Infections.

    Published in:
    Advanced Science, 2023, v. 10, n. 8, p. 1, doi. 10.1002/advs.202207301
    By:
    • Carius, Patrick;
    • Jungmann, Annemarie;
    • Bechtel, Marco;
    • Griβmer, Alexander;
    • Boese, Annette;
    • Gasparoni, Gilles;
    • Salhab, Abdulrahman;
    • Seipelt, Ralf;
    • Urbschat, Klaus;
    • Richter, Clémentine;
    • Meier, Carola;
    • Bojkova, Denisa;
    • Walter, Jindrich Cinatl,Jörn;
    • Schneider-Daum, Nicole;
    • Lehr, Claus-Michael
    Publication type:
    Article
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    Tumor Necrosis Factor‐Alpha Inhibits the Replication of Patient‐Derived Archetype BK Polyomavirus While Activating Rearranged Strains.

    Published in:
    Journal of Medical Virology, 2025, v. 97, n. 2, p. 1, doi. 10.1002/jmv.70210
    By:
    • Lauterbach‐Rivière, Lise;
    • Thuringer, Lucia;
    • Feld, Pascal;
    • Toews, Lina Kathrin;
    • Schüssler, Jessica;
    • Klinz, Jonas;
    • Gläser, Lars;
    • Lohse, Stefan;
    • Sternjakob, Anna;
    • Gasparoni, Gilles;
    • Kattler‐Lackes, Kathrin;
    • Walter, Jörn;
    • Lauterbach, Marcel A.;
    • Rahmann, Sven;
    • Möller, Lars;
    • Laue, Michael;
    • Janssen, Martin;
    • Stöckle, Michael;
    • Schmit, David;
    • Fliser, Danilo
    Publication type:
    Article
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    Unique and assay specific features of NOMe-, ATAC- and DNase I-seq data.

    Published in:
    Nucleic Acids Research, 2019, v. 47, n. 20, p. 10580, doi. 10.1093/nar/gkz799
    By:
    • Nordström, Karl J V;
    • Schmidt, Florian;
    • Gasparoni, Nina;
    • Salhab, Abdulrahman;
    • Gasparoni, Gilles;
    • Kattler, Kathrin;
    • Müller, Fabian;
    • Ebert, Peter;
    • Costa, Ivan G;
    • consortium, DEEP;
    • Pfeifer, Nico;
    • Lengauer, Thomas;
    • Schulz, Marcel H;
    • Walter, Jörn
    Publication type:
    Article
    26

    sncRNA Zoo: a repository for circulating small noncoding RNAs in animals.

    Published in:
    Nucleic Acids Research, 2019, v. 47, n. 9, p. 4431, doi. 10.1093/nar/gkz227
    By:
    • Fehlmann, Tobias;
    • Backes, Christina;
    • Pirritano, Marcello;
    • Laufer, Thomas;
    • Galata, Valentina;
    • Kern, Fabian;
    • Kahraman, Mustafa;
    • Gasparoni, Gilles;
    • Ludwig, Nicole;
    • Lenhof, Hans-Peter;
    • Gregersen, Henrike A;
    • Francke, Richard;
    • Meese, Eckart;
    • Simon, Martin;
    • Keller, Andreas
    Publication type:
    Article
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    Sodium is an ionic checkpoint for human T<sub>H</sub>2 cells and shapes the atopic skin microenvironment.

    Published in:
    Science Translational Medicine, 2019, v. 11, n. 480, p. N.PAG, doi. 10.1126/scitranslmed.aau0683
    By:
    • Matthias, Julia;
    • Maul, Julia;
    • Noster, Rebecca;
    • Meinl, Hanna;
    • Chao, Ying-Yin;
    • Gerstenberg, Heiko;
    • Jeschke, Florian;
    • Gasparoni, Gilles;
    • Welle, Anna;
    • Walter, Jörn;
    • Nordström, Karl;
    • Eberhardt, Klaus;
    • Renisch, Dennis;
    • Donakonda, Sainitin;
    • Knolle, Percy;
    • Soll, Dominik;
    • Grabbe, Stephan;
    • Garzorz-Stark, Natalie;
    • Eyerich, Kilian;
    • Biedermann, Tilo
    Publication type:
    Article
    29

    Longitudinal multi-omics analysis identifies early blood-based predictors of anti-TNF therapy response in inflammatory bowel disease.

    Published in:
    Genome Medicine, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13073-022-01112-z
    By:
    • Mishra, Neha;
    • Aden, Konrad;
    • Blase, Johanna I.;
    • Baran, Nathan;
    • Bordoni, Dora;
    • Tran, Florian;
    • Conrad, Claudio;
    • Avalos, Diana;
    • Jaeckel, Charlot;
    • Scherer, Michael;
    • Sørensen, Signe B.;
    • Overgaard, Silja H.;
    • Schulte, Berenice;
    • Nikolaus, Susanna;
    • Rey, Guillaume;
    • Gasparoni, Gilles;
    • Lyons, Paul A.;
    • Schultze, Joachim L.;
    • Walter, Jörn;
    • Andersen, Vibeke
    Publication type:
    Article
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    Transcriptional and Epigenetic Consequences of DMSO Treatment on HepaRG Cells.

    Published in:
    Cells (2073-4409), 2022, v. 11, n. 15, p. 2298, doi. 10.3390/cells11152298
    By:
    • Dubois-Pot-Schneider, Hélène;
    • Aninat, Caroline;
    • Kattler, Kathrin;
    • Fekir, Karim;
    • Jarnouen, Kathleen;
    • Cerec, Virginie;
    • Glaise, Denise;
    • Salhab, Abdulrahman;
    • Gasparoni, Gilles;
    • Takashi, Kubo;
    • Ishida, Seiichi;
    • Walter, Jörn;
    • Corlu, Anne
    Publication type:
    Article
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    Combining transcription factor binding affinities with open-chromatin data for accurate gene expression prediction.

    Published in:
    Nucleic Acids Research, 2017, v. 45, n. 1, p. 54, doi. 10.1093/nar/gkw1061
    By:
    • Schmidt, Florian;
    • Gasparoni, Nina;
    • Gasparoni, Gilles;
    • Gianmoena, Kathrin;
    • Cadenas, Cristina;
    • Polansky, Julia K.;
    • Ebert, Peter;
    • Barann, Matthias;
    • Sinha, Anupam;
    • Fröhler, Sebastian;
    • Jieyi Xiong;
    • Amirabad, Azim Dehghani;
    • Ardakani, Fatemeh Behjati;
    • Hutter, Barbara;
    • Zipprich, Gideon;
    • Felder, Bärbel;
    • Eils, Jürgen;
    • Brors, Benedikt;
    • Wei Chen;
    • Hengstler, Jan G.
    Publication type:
    Article