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A brief primer on genomic epidemiology: lessons learned from Mycobacterium tuberculosis.
- Published in:
- Annals of the New York Academy of Sciences, 2017, v. 1388, n. 1, p. 59, doi. 10.1111/nyas.13273
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- Publication type:
- Article
Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis.
- Published in:
- Nature Genetics, 2013, v. 45, n. 10, p. 1183, doi. 10.1038/ng.2747
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- Publication type:
- Article
Mycobacterium tuberculosis mutation rate estimates from different lineages predict substantial differences in the emergence of drug-resistant tuberculosis.
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- Nature Genetics, 2013, v. 45, n. 7, p. 784, doi. 10.1038/ng.2656
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- Publication type:
- Article
Characterization of the Upper Respiratory Tract Microbiomes of Patients with Pandemic H1N1 Influenza.
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- PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069559
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- Publication type:
- Article
Cross-Lineage Influenza B and Heterologous Influenza AAntibody Responses in Vaccinated Mice: ImmunologicInteractions and B/Yamagata Dominance.
- Published in:
- PLoS ONE, 2012, v. 7, n. 6, p. 1, doi. 10.1371/journal.pone.0038929
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- Publication type:
- Article
Systems-Level Comparison of Host-Responses Elicited by Avian H5N1 and Seasonal H1N1 Influenza Viruses in Primary Human Macrophages.
- Published in:
- PLoS ONE, 2009, v. 4, n. 12, p. e8072, doi. 10.1371/journal.pone.0008072
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- Publication type:
- Article
Whole-Genome Sequencing of Measles Virus Genotypes H1 and D8 During Outbreaks of Infection Following the 2010 Olympic Winter Games Reveals Viral Transmission Routes.
- Published in:
- 2015
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- Publication type:
- journal article
Cross-reactive and Vaccine-Induced Antibody to an Emerging Swine-Origin Variant of Influenza A Virus Subtype H3N2 (H3N2v).
- Published in:
- Journal of Infectious Diseases, 2012, v. 206, n. 12, p. 1852, doi. 10.1093/infdis/jis500
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- Publication type:
- Article
Estimates of Influenza Vaccine Effectiveness for 2007–2008 From Canada's Sentinel Surveillance System: Cross-Protection Against Major and Minor Variants.
- Published in:
- Journal of Infectious Diseases, 2012, v. 205, n. 12, p. 1858, doi. 10.1093/infdis/jis283
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- Publication type:
- Article
Immuno-epidemiologic Correlates of Pandemic H1N1 Surveillance Observations: Higher Antibody and Lower Cell-Mediated Immune Responses with Advanced Age.
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- Journal of Infectious Diseases, 2011, v. 203, n. 2, p. 158, doi. 10.1093/infdis/jiq039
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- Publication type:
- Article
Systems-level comparison of host responses induced by pandemic and seasonal influenza A H1N1 viruses in primary human type I-like alveolar epithelial cells in vitro.
- Published in:
- Respiratory Research, 2010, v. 11, p. 147, doi. 10.1186/1465-9921-11-147
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- Publication type:
- Article
Trust and the ethical challenges in the use of whole genome sequencing for tuberculosis surveillance: a qualitative study of stakeholder perspectives.
- Published in:
- 2019
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- Publication type:
- journal article
Ethical challenges in the treatment of non-refugee migrants with tuberculosis in Canada.
- Published in:
- Journal of Public Health, 2021, v. 43, n. 4, p. e701, doi. 10.1093/pubmed/fdaa222
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- Publication type:
- Article
Assessing the precision of high-throughput computational and laboratory approaches for the genome-wide identification of protein subcellular localization in bacteria.
- Published in:
- BMC Genomics, 2005, v. 6, p. 162, doi. 10.1186/1471-2164-6-162
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- Publication type:
- Article
Beyond the SNP Threshold: Identifying Outbreak Clusters Using Inferred Transmissions.
- Published in:
- Molecular Biology & Evolution, 2019, v. 36, n. 3, p. 587, doi. 10.1093/molbev/msy242
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- Publication type:
- Article
Genomic Infectious Disease Epidemiology in Partially Sampled and Ongoing Outbreaks.
- Published in:
- Molecular Biology & Evolution, 2017, v. 34, n. 4, p. 997, doi. 10.1093/molbev/msw275
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- Publication type:
- Article
Bayesian Inference of Infectious Disease Transmission from Whole-Genome Sequence Data.
- Published in:
- Molecular Biology & Evolution, 2014, v. 31, n. 7, p. 1869, doi. 10.1093/molbev/msu121
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- Publication type:
- Article
A Web-Based and In-Person Risk Reframing Intervention to Influence Mothers’ Tolerance for, and Parenting Practices Associated With, Children’s Outdoor Risky Play: Randomized Controlled Trial.
- Published in:
- Journal of Medical Internet Research, 2021, v. 23, n. 4, p. N.PAG, doi. 10.2196/24861
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- Publication type:
- Article
A Web-Based and In-Person Risk Reframing Intervention to Influence Mothers' Tolerance for, and Parenting Practices Associated With, Children's Outdoor Risky Play: Randomized Controlled Trial.
- Published in:
- 2021
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- Publication type:
- journal article
PSORTdb: a protein subcellular localization database for bacteria.
- Published in:
- Nucleic Acids Research, 2005, v. 33, n. suppl 1, p. d164
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- Publication type:
- Article
PSORT-B: improving protein subcellular localization prediction for Gram-negative bacteria.
- Published in:
- Nucleic Acids Research, 2003, v. 31, n. 13, p. 3613, doi. 10.1093/nar/gkg602
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- Publication type:
- Article
Genetic determinants of cocaine-associated agranulocytosis.
- Published in:
- BMC Research Notes, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13104-015-1219-4
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- Publication type:
- Article
InnateDB: facilitating systems-level analyses of the mammalian innate immune response.
- Published in:
- Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.55
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- Publication type:
- Article
Real-time digital pathogen surveillance -- the time is now.
- Published in:
- Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-015-0726-x
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- Publication type:
- Article
Using Whole-genome Sequencing to Determine the Timing of Secondary Tuberculosis in British Columbia, Canada.
- Published in:
- Clinical Infectious Diseases, 2021, v. 73, n. 3, p. 535, doi. 10.1093/cid/ciaa1224
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- Publication type:
- Article
Building the Framework for Standardized Clinical Laboratory Reporting of Next-generation Sequencing Data for Resistance-associated Mutations in Mycobacterium tuberculosis Complex.
- Published in:
- Clinical Infectious Diseases, 2019, v. 69, n. 9, p. 1631, doi. 10.1093/cid/ciz219
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- Publication type:
- Article
Molecular Epidemiology of Tuberculosis in British Columbia, Canada: A 10-Year Retrospective Study.
- Published in:
- Clinical Infectious Diseases, 2018, v. 66, n. 6, p. 849, doi. 10.1093/cid/cix906
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- Publication type:
- Article
RNA-Seq Analysis of Gene Expression, Viral Pathogen, and B-Cell/T-Cell Receptor Signatures in Complex Chronic Disease.
- Published in:
- Clinical Infectious Diseases, 2017, v. 64, n. 4, p. 476, doi. 10.1093/cid/ciw767
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- Publication type:
- Article
Lyme Disease Diagnosed by Alternative Methods: A Phenotype Similar to That of Chronic Fatigue Syndrome.
- Published in:
- Clinical Infectious Diseases, 2015, v. 61, n. 7, p. 1084, doi. 10.1093/cid/civ470
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- Publication type:
- Article
InnateDB & Cerebral: user-friendly tools for the systems-level analysis of innate immunity.
- Published in:
- FASEB Journal, 2008, v. 22, p. 541, doi. 10.1096/fasebj.22.2_supplement.541
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- Publication type:
- Article
Self-rated health and reasons for non-vaccination against seasonal influenza in Canadian adults with asthma.
- Published in:
- PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0172117
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- Publication type:
- Article
Metagenomic Investigation of Plasma in Individuals with ME/CFS Highlights the Importance of Technical Controls to Elucidate Contamination and Batch Effects.
- Published in:
- PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0165691
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- Publication type:
- Article
Submaximal exercise testing with near-infrared spectroscopy in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome patients compared to healthy controls: a case-control study.
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- Journal of Translational Medicine, 2015, v. 13, n. 1, p. 1, doi. 10.1186/s12967-015-0527-8
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- Publication type:
- Article
Robust TLR4-induced gene expression patterns are not an accurate indicator of human immunity.
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- Journal of Translational Medicine, 2010, v. 8, p. 6, doi. 10.1186/1479-5876-8-6
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- Publication type:
- Article
Cerebral: a Cytoscape plugin for layout of and interaction with biological networks using subcellular localization annotation.
- Published in:
- Bioinformatics, 2007, v. 23, n. 8, p. 1040, doi. 10.1093/bioinformatics/btm057
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- Publication type:
- Article
Evidence-based design and evaluation of a whole genome sequencing clinical report for the reference microbiology laboratory.
- Published in:
- PeerJ, 2018, p. 1, doi. 10.7717/peerj.4218
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- Publication type:
- Article
Virus genomics and evolution: the transformative effect of new technologies and multidisciplinary collaboration on virus research and outbreak management.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1019-8
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- Publication type:
- Article
Methods for predicting bacterial protein subcellular localization.
- Published in:
- 2006
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- Publication type:
- Correction Notice
Methods for predicting bacterial protein subcellular localization.
- Published in:
- Nature Reviews Microbiology, 2006, v. 4, n. 10, p. 741, doi. 10.1038/nrmicro1494
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- Publication type:
- Article
The problem with defining foreign birth as a risk factor in tuberculosis epidemiology studies.
- Published in:
- PLoS ONE, 2019, v. 14, n. 4, p. 1, doi. 10.1371/journal.pone.0216271
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- Publication type:
- Article
Universal genotyping reveals province-level differences in the molecular epidemiology of tuberculosis.
- Published in:
- PLoS ONE, 2019, v. 14, n. 4, p. 1, doi. 10.1371/journal.pone.0214870
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- Publication type:
- Article
Whole blood human transcriptome and virome analysis of ME/CFS patients experiencing post-exertional malaise following cardiopulmonary exercise testing.
- Published in:
- PLoS ONE, 2019, v. 14, n. 3, p. 1, doi. 10.1371/journal.pone.0212193
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- Publication type:
- Article
Genotyping and Whole-Genome Sequencing to Identify Tuberculosis Transmission to Pediatric Patients in British Columbia, Canada, 2005-2014.
- Published in:
- 2018
- By:
- Publication type:
- journal article
Immunosignature Analysis of Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS).
- Published in:
- Molecular Neurobiology, 2019, v. 56, n. 6, p. 4249, doi. 10.1007/s12035-018-1354-8
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- Publication type:
- Article
systematic method for surveying data visualizations and a resulting genomic epidemiology visualization typology: GEViT.
- Published in:
- Bioinformatics, 2019, v. 35, n. 10, p. 1668, doi. 10.1093/bioinformatics/bty832
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- Publication type:
- Article
Adjutant: an R-based tool to support topic discovery for systematic and literature reviews.
- Published in:
- Bioinformatics, 2019, v. 35, n. 6, p. 1070, doi. 10.1093/bioinformatics/bty722
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- Publication type:
- Article
A Sentinel Platform to Evaluate Influenza Vaccine Effectiveness and New Variant Circulation, Canada 2010–2011 Season.
- Published in:
- Clinical Infectious Diseases, 2012, v. 55, n. 3, p. 332, doi. 10.1093/cid/cis431
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- Publication type:
- Article
Comparing Mycobacterium tuberculosis transmission reconstruction models from whole genome sequence data.
- Published in:
- Epidemiology & Infection, 2023, v. 151, p. 1, doi. 10.1017/S0950268823000900
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- Publication type:
- Article
Prevalence of seroprotection against the pandemic (H1N1) virus after the 2009 pandemic.
- Published in:
- 2010
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- Publication type:
- journal article
Prevalence of seroprotection against the pandemic (H1N1) virus after the 2009 pandemic.
- Published in:
- Canadian Medical Association Journal (CMAJ), 2010, v. 182, n. 17, p. 1851, doi. 10.1503/cmaj.100910
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- Publication type:
- Article